Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00181 ATGGCGGAGCGCTTCTCTCTCACACCTACTCTCCCGTTGCCGCCATCAGAGTCTTCAGCTTCTGCAAAATCAATGGCTTCCGCTTTCACTCTTGGCAGAGCGGCTGCTTCCTCCTCTCACTTCGCTTCCTCAGCCTCTAAAACAACGGTCTCGATCTCTTCCTTTTCGCGTTCCCGTTTGCATCACTCTTCATCCTCATCAGTCGCTGGTTTCAGTTTGCTGAGATCATCTCCTCCCATTTCTCGCTTAGTTCTTAGTGAGAGAAGGCGAAGTTCGTTTGTTTCAAATAGAGAATTGGGCTCGGTTTCATCTCCGAAATGCTTTGCTTCGTATCCTGACCAGTTGAAGAGTGCCCGTGAAGATGTCAAAGACCTTCTCAAAACGAAGTTCTGTCATCCTATTATGGTTCGCCTTGCCTGGCATGATGCTGGTACCTATAACAAGGAAATAGAGGAGTGGCCGCAGAGGGGTGGAGCTAATGGAAGTCTGAGATTTGATGTTGAACTAAAACATGCTGCCAATGCTGGTCTTGTAAATGCAGTGAAGCTTATTGAACCGATCAAAGAGAAGTATCCTTCTGTGACTTATGCAGATTTGTTTCAGTTGGCCAGTGCTACAGCAATCGAGGATGCTGGAGGACCCAAAATTCCAATGAAATATGGTCGAGTGGATACCTCTGGACCAGAGCAATCGCCAGAAGAAGGGAGGCTCCCTGATGCTGGTCCTCCATCACCTGCAAGTCATCTACGAGACGTTTTCTACAGGATGGGCCTTGATGATAAGGAAATTGTTGCATTGTCTGGTGCGCACACATTAGGAAGATCAAGACCTGAACGCAGTGGTTGGGGCAAACCAGAGACCCAATACACGAAAGATGGGCCAGGAGCACCAGGAGGACAGTCCTGGACTGTGCGGTGGTTGAAGTTCAATAATTCCTATTTTAAGGATATCAAAGAAAGAAAGGATGAAGATCTGCTCGTTCTGCCTACAGATGCTGTTCTTTTTGAAGATCCATCGTTCAAGGTTTATGCCGAGAAGTACGCCGAAGATCAAGAAGCATTCTTCAAGGATTATGCTGAAGCCCATGCCAAACTCAGCAATCTTGGAGCCAAATTTGATCCTCCTGAGGGTATCAGCATTGATGATGGGCCTTCAAAACCCGTCGGAGAGAAGTTTGAGGCAGCAAAATACTCGTCGGGAAAGTATGAAAAAGCAGCATCTGTCTTGAATAGTCACGACCCTCCAATAATTTTAGCAAAAGTTGATGCCAGTGATGAAGCAAACAAAGAGATAGCCAAGGAATTTCAAATCCAGGGTTTCCCCACAATTAAGATTCTGAGAAATGGGGGCAAGAGCGTACAAGACTATAACGGCCCTCGTGACTCTCATCGAATTGTTCAATATTTGAAGAGACAAATTGGACCTGCTTCAGTTGAACTTAAATCTACAGAAGATGCTACTAATCTTATCGGTGACAAGAAGATTGTTGGCGTTTTCCCACAATTTTCAGGGGAGGAGTTCACAAACTACACAGTTCTGGCCGAGAATCTGAGATCTGACTATGATTTAGGACATACATTGGACGCCAAACTACTCCCACGTGGAGAAACATCTGTCACAGGTCCTCTAGTTAGGCTAATCAAGTCATTTGATGAACTCTTTGTTGATTTTGAGGATTTTGATGTGGATGCCATGAAGAAGTTCATTGAAGAGTCGAGTGTTCCACTTATAACCATCTTTGATAATGAACCAAGCAATGAAATGTTTGTCATCAAATTCTTTGATCTTGAAATCGAAAGAGTTATGCTGTTTTTTAACTTCAGCGGTGAGGATGCTCAGTCTTTTGAATCCAATTATCGCTGCATTGCCGAACAATACAAAGGAAAGGACATAGGTTTTCTGAGTGGAGATCTAGACGCAAGTGGAGAAGCATTAAAGTACTTTGGAATTAGAGATGATCAAGTGCCTGCAATTTTGATACAAAGTATTGCCGAACAAAATTATCTGAAACCAAATGTAGATGCTAATCAGATTGCTACTTGGTTTAAAGAATACAAGGCTGGAAATGTGCTGCCATATAAGAAATCAGAGCCTATCCCTGAACAAAACGATGAGCCTGTGAAAGTGGTTGTTCATGACAACATCCAGGACGTGGTTTTCAACTCTGGAAAGAATGTTCTTCTCGAATTCTATGCACCCTGGTGTCAGCATTGCAAAACTTTGGCTCCCATCTTAGAGGAAGTTGCTTTATCATATGAAGCAGATCCGAATGTCATCATAGCCAAGCTTGTATTTGCACAACTGACTCCATATGACTTGGCAAGGGCATCCTGTGTTTGTCGAAAATGGAAATACATCATCCTAAATCCTGAGTTTTGGCGCACGGCTTGTTTGAAGGCTTGGCAGATATTTGGAGTGGTTGAAAACTACAAAATTTTACAATCGAAGTATGGTGGATCGTGGAAAAAGATGTGGCTTTTAAGGCCGAGGATTCGCACTGATGGAATTTATGTCAGCAGAAATACTTATTTTCGTGCTGGAGTTTCGCAGTGGAAGGTTTCAAATCCAGTTCACCTGATCTGCTACTATCGTTATATGAGATTTTCTCACTCAGGTCGATTTCTTTACAAGATTTCTTCTCAAAAGCTCAAGGATGTAGCAAAATACATGAACTTCCGTGCTTCAAAAGTAAATTGTATCTATCGTGGCCATTACAAATTGTCTGAGGACAAGATTGAAGCTGCTATTTTGTACCCAGGCTTGCGTCCAACTGTGCTGAGAATTCGGTTAAGGGTAAGAGGAACTACTACAGGTGCCAACAATAGGATGGATCTTTTGTCTCTCGTCACAAGTGGGATGAATGACTCGGAGATCAGGGGTCCTGATGAAGACATCCTTGGAATAGTTGAAGGATGGGAGGATGATGAAACCCATAATCCAGACGTGCCTGCAATTTCACACGAGAAAGGTCTCAGGCCTTTTATCTTTGTTCCCTTCGAAGAGATTATGGAACTGGTATGCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCGTTTGTCCTCCTTGCTGATGTTCTTTTCGTGCTTAGGATCTTTACCGTGGAGAAGAACCGTTATCTCTACATTCGCTTATATCCAGAGCCGTCAAAGGTCTCCAAACCTCCGTTTGCTCGTTTCATTCTTCGAGTCACTAACCATGGACCTAACTGTAAACCCCATGTTTCTCCTGTTCAAGAGAGACTTATTCGAACTAGTGAAGACTTTGTTTGGCCCGTTGACGCCAATTTTCAAGGCCGAGTTGTCATTGATGTGGAATTTTTGGACCTTATGGTTGTCCCTCAAAATGGAGGAGAATCCAAATCCATATGGCCTAGTGATGGAATTGAATACATTTCAACCCAAACAACACTTAATCGGCTCTCTCGCATGTTCTCCGAGTCCATACATGCTGATGCTACCATCAATATGGCCGATGGCAGTTTAACCGCCCACAAGGCAATTTTATCAGCAAGTTCTCCTGTATTTCACAGCATGTTCCATCACAATCTCAAGGAAAAAGAGTCCTCCACTATCCAAATCGAAGACATGTCCTTAGAAATATGCACTGTCCTATTAAGCTATTTGTATGGTACCATCAAACAAGAAGATTTTTGGAAGTACAGGCTTTCTCTGCTCGGAGTGGCGAACAAGTATGCCATTGCCGACCTAAAAGATGCCTGCGAGGAAAGCCTAATGGAGGACATCAATTCGGGCAATGTTCTCGAGCGATTACAAGAAGCATGGTTGTACCAGCTTGACAAGCTGAAAAAAGGGTGTATGACGTATTTGTTTGATTTCGGAAAGGTTTACGACATCAAAGACGAAATAAGCAACTTTTGCAAATATGCAGACAGGGAGTTGATGCTGGAAATATTTCAAGAGTTGCTCTCAGTCCGGAATCCTTCTTAA 3948 43.49 MAERFSLTPTLPLPPSESSASAKSMASAFTLGRAAASSSHFASSASKTTVSISSFSRSRLHHSSSSSVAGFSLLRSSPPISRLVLSERRRSSFVSNRELGSVSSPKCFASYPDQLKSAREDVKDLLKTKFCHPIMVRLAWHDAGTYNKEIEEWPQRGGANGSLRFDVELKHAANAGLVNAVKLIEPIKEKYPSVTYADLFQLASATAIEDAGGPKIPMKYGRVDTSGPEQSPEEGRLPDAGPPSPASHLRDVFYRMGLDDKEIVALSGAHTLGRSRPERSGWGKPETQYTKDGPGAPGGQSWTVRWLKFNNSYFKDIKERKDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGISIDDGPSKPVGEKFEAAKYSSGKYEKAASVLNSHDPPIILAKVDASDEANKEIAKEFQIQGFPTIKILRNGGKSVQDYNGPRDSHRIVQYLKRQIGPASVELKSTEDATNLIGDKKIVGVFPQFSGEEFTNYTVLAENLRSDYDLGHTLDAKLLPRGETSVTGPLVRLIKSFDELFVDFEDFDVDAMKKFIEESSVPLITIFDNEPSNEMFVIKFFDLEIERVMLFFNFSGEDAQSFESNYRCIAEQYKGKDIGFLSGDLDASGEALKYFGIRDDQVPAILIQSIAEQNYLKPNVDANQIATWFKEYKAGNVLPYKKSEPIPEQNDEPVKVVVHDNIQDVVFNSGKNVLLEFYAPWCQHCKTLAPILEEVALSYEADPNVIIAKLVFAQLTPYDLARASCVCRKWKYIILNPEFWRTACLKAWQIFGVVENYKILQSKYGGSWKKMWLLRPRIRTDGIYVSRNTYFRAGVSQWKVSNPVHLICYYRYMRFSHSGRFLYKISSQKLKDVAKYMNFRASKVNCIYRGHYKLSEDKIEAAILYPGLRPTVLRIRLRVRGTTTGANNRMDLLSLVTSGMNDSEIRGPDEDILGIVEGWEDDETHNPDVPAISHEKGLRPFIFVPFEEIMELVCSPSPSPSPSPSFVLLADVLFVLRIFTVEKNRYLYIRLYPEPSKVSKPPFARFILRVTNHGPNCKPHVSPVQERLIRTSEDFVWPVDANFQGRVVIDVEFLDLMVVPQNGGESKSIWPSDGIEYISTQTTLNRLSRMFSESIHADATINMADGSLTAHKAILSASSPVFHSMFHHNLKEKESSTIQIEDMSLEICTVLLSYLYGTIKQEDFWKYRLSLLGVANKYAIADLKDACEESLMEDINSGNVLERLQEAWLYQLDKLKKGCMTYLFDFGKVYDIKDEISNFCKYADRELMLEIFQELLSVRNPS 1315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1722069 1748855 + BLOR08669 Blo18g00181 73485

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00181 1315 CDD PDI_a_family 402 469 - -
Blo18g00181 1315 ProSiteProfiles Plant heme peroxidase family profile. 135 410 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 Gene3D Peroxidase, domain 2 240 363 - -
Blo18g00181 1315 Gene3D Glutaredoxin 693 760 - -
Blo18g00181 1315 MobiDBLite consensus disorder prediction 269 297 - -
Blo18g00181 1315 Pfam BTB/POZ domain 1142 1246 IPR000210 GO:0005515
Blo18g00181 1315 SUPERFAMILY F-box domain 763 832 IPR036047 GO:0005515
Blo18g00181 1315 Pfam Peroxidase 119 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 Pfam F-box only protein C-terminal region 810 1005 IPR045464 -
Blo18g00181 1315 ProSitePatterns Peroxidases proximal heme-ligand signature. 262 272 IPR019793 -
Blo18g00181 1315 SUPERFAMILY Thioredoxin-like 479 575 IPR036249 -
Blo18g00181 1315 SUPERFAMILY Thioredoxin-like 400 475 IPR036249 -
Blo18g00181 1315 Gene3D - 118 371 - -
Blo18g00181 1315 SMART BTB_4 1150 1248 IPR000210 GO:0005515
Blo18g00181 1315 CDD PDI_b'_family 590 686 - -
Blo18g00181 1315 CDD ascorbate_peroxidase 109 373 - -
Blo18g00181 1315 PRINTS Plant ascorbate peroxidase signature 331 355 IPR002207 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PRINTS Plant ascorbate peroxidase signature 111 131 IPR002207 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PRINTS Plant ascorbate peroxidase signature 212 224 IPR002207 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PRINTS Plant ascorbate peroxidase signature 193 211 IPR002207 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PRINTS Plant ascorbate peroxidase signature 132 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 SUPERFAMILY POZ domain 1134 1246 IPR011333 -
Blo18g00181 1315 MobiDBLite consensus disorder prediction 216 249 - -
Blo18g00181 1315 ProSiteProfiles BTB domain profile. 1150 1209 IPR000210 GO:0005515
Blo18g00181 1315 SUPERFAMILY Thioredoxin-like 672 763 IPR036249 -
Blo18g00181 1315 MobiDBLite consensus disorder prediction 1 20 - -
Blo18g00181 1315 Gene3D Potassium Channel Kv1.1; Chain A 1129 1277 IPR011333 -
Blo18g00181 1315 SUPERFAMILY Thioredoxin-like 572 704 IPR036249 -
Blo18g00181 1315 SUPERFAMILY Heme-dependent peroxidases 115 371 IPR010255 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 Gene3D Glutaredoxin 577 692 - -
Blo18g00181 1315 ProSiteProfiles Thioredoxin domain profile. 685 836 IPR013766 -
Blo18g00181 1315 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 34 394 IPR044831 GO:0004601|GO:0034599
Blo18g00181 1315 Gene3D Glutaredoxin 391 472 - -
Blo18g00181 1315 CDD PDI_b_family 477 571 - -
Blo18g00181 1315 Pfam Thioredoxin 400 470 IPR013766 -
Blo18g00181 1315 Pfam Thioredoxin 707 763 IPR013766 -
Blo18g00181 1315 Gene3D - 761 834 - -
Blo18g00181 1315 Pfam Thioredoxin-like domain 499 682 - -
Blo18g00181 1315 Pfam F-box-like 764 799 IPR001810 GO:0005515
Blo18g00181 1315 Gene3D Glutaredoxin 473 576 - -
Blo18g00181 1315 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PRINTS Haem peroxidase superfamily signature 212 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PRINTS Haem peroxidase superfamily signature 132 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PRINTS Haem peroxidase superfamily signature 194 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PRINTS Haem peroxidase superfamily signature 302 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo18g00181 1315 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 34 394 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00181 K00434 E1.11.1.11; L-ascorbate peroxidase [EC:1.11.1.11] - zju:107421087 570.852
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01298 Blo18g00181 CCT
Blo01g01298 Blo18g00181 ECH
Blo17g00175 Blo18g00181 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g01097 Blo-Chr13:33118168 Blo18g00181 Blo-Chr18:1722069 4.41E-61 dispersed
Blo14g00147 Blo-Chr14:1105939 Blo18g00181 Blo-Chr18:1722069 8.07E-68 dispersed
Blo17g00021 Blo-Chr17:123473 Blo18g00181 Blo-Chr18:1722069 3.97E-26 dispersed
Blo18g00181 Blo-Chr18:1722069 Blo18g00183 Blo-Chr18:1755207 1.40E-45 proximal
Blo01g01298 Blo-Chr1:49781028 Blo18g00181 Blo-Chr18:1722069 8.05E-165 transposed
Blo01g01311 Blo-Chr1:50249303 Blo18g00181 Blo-Chr18:1722069 6.16E-09 transposed
Blo03g00490 Blo-Chr3:17614952 Blo18g00181 Blo-Chr18:1722069 2.14E-88 transposed
Blo09g00059 Blo-Chr9:1030734 Blo18g00181 Blo-Chr18:1722069 1.88E-28 transposed
Blo17g00174 Blo-Chr17:1766076 Blo18g00181 Blo-Chr18:1722069 1.96E-100 transposed
Blo17g00175 Blo-Chr17:1771070 Blo18g00181 Blo-Chr18:1722069 1.18E-06 transposed
Blo12g00653 Blo-Chr12:24867798 Blo18g00181 Blo-Chr18:1722069 5.51E-06 wgd
Blo17g00173 Blo-Chr17:1764154 Blo18g00181 Blo-Chr18:1722069 2.44E-88 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g250 Blo01g01298 . . . Bpe02g00639 . . Bma01g02074 Cmo04g02483 Cmo15g00679 . Cma09g00787 . . Sed01g3115 Cpe06g00621 . Bhi04g01901 Tan11g1265 Cmetu07g2195 . . . . Cla08g00602 Cam08g1016 Cec08g0606 Cco08g0717 Clacu08g0727 . Cre08g0535 Cone4ag1414 Cone7ag1524 Cone17ag1287 Cone20ag0440 Lsi04g02397 Csa04g01791 . Cme03g00538 Blo17g00175 Blo18g00181 . . Bpe02g01646 Bpe14g00385 Bma01g00810 Bma02g00216 . . Cmo09g00779 . . Car04g02297 Car15g00617 Cpe01g02058 . . . . . . . . Cla11g01541 Cam11g1603 Cec11g1631 Cco11g1633 Clacu11g1759 Cmu11g1576 Cre11g1994 Lsi08g00442 . Chy07g00630 Cme07g00838
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003748 3 2 3 2 2 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 4 1 1 46
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13571 PF00141 peroxidase 3.90E-45 CL0617 Blo TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00181 Blo_Chr18 FPKM 8.322098 11.63999 18.004202 19.247414 18.833862 15.415641 20.003704 0.0 0.0 0.0