Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00187 ATGGCTGCTAATGTTATTCTGCCTCTGCTCCTTTCATTCTCTTTCCTTCACTCTTACGCTCTAGACCTGAACGATGACTCCCAGGATTCCCCAATTTCACGCTTCCAGCGCTATCTCAGAATCAACACTGCGCACCCAAATCCTGATTACTCTTCTGCTGTTTCCTTCCTCAACTCCCAGGCACTCTCTCTTGGCCTCCATACCCAGACGCTGGAGTTCGCATCTGGGAAACCCCTTCTTCTCTTAACCTGGTATGGCTCCAATCCTTCTCTACCTTCTATTTTGTTCAACTCTCACATCGATTCCGTCCCCGCCGAGCCTTCCAAGTGGCTACACCCTCCCTTCTCCGCGTTCTTATCGTCAGATGGAAAAATTTTTGCCCGGGGTTCACAGGACGACAAGTGTATTGGCATTCAGTACCTCGAGGCAATCAGAAACCTGAAACGACGAAATTTCGCTCCACTCCGAACGATTTATGTTTCATATGTGCCAGACGAGGAGATTGGTGGCTTGGACGGGGCTATGAAGTTCACAGCCTCGAAGCATTTCAAGGAATTGAATATCGGTTTTGTATTGGACGAAGGTCAGGCTTCTCCAAACGATGAGTTTCGCGTCTTCTATGCGGATAGAACTCCATGGGGGCTGAAAATTAAAGCCAATGGAACACCAGGGCATGGTTCCAGAATGTACGACAACAGTGCAATGGAGAATTTGATGAAGAGCATTGAGGTTGTCAGTAAGTTCAGGGAGATTCAATTTGATATTGTTAAGGCGGGTGAAGCTGCCAATTCTGAGGTTATCTCAGTCAATTCTGTTTATGTCAATGCCGGAATTTCCTCTCCTACTGGGTTTGTGATGAATATGCAACCTTCTGAGGCAGAAGCAGGCTTTGATCTCAGATTGCCTCCCATGGCAGACCCGGATCTTCTTAAAAGAAGAATTGCAGAAGAATGGGCTCCAGCCCGAAGAAACATGACATTTCAGATAATTGAAAAGGGTCCCATGAGAGACAATACGGGGCGTCCGTTAATGACGCCTACAAATAACTCTAATCCATGGTGGCCTGTTTTTGAGAAAGCAATCAAAGATGCAGGAGGAAAGCTTTCTAAGCCTGAAATCCTTGCTTCCACTACAGATGCTCGGTACGTGAGACAGTTGGGAATTCCTGCGCTCGGCTTCTCACCAATGAAGAATACTCCAATTTTACTTCATGACCACAACGAGTTCCTCACAGATATCATCTTCTTAGAGGGCATAAAGGTTTATGAATCCATAATCAGTGCTTTGAGTTCCTTCGAAGAAACACCTGAACTTATTCTCCTCCCTGTCTCCATCTCTCCCCTTCATCTCCTCGAAATAGAGGCCACACTTCATCTGTTAACGAAAATGGTGAAGAAAGAGCTGAAAAACCAAGGTGGGTTATCGAGATCAATGGCGGAAAAATCAGGAAAATCGCCATTGTCACTACCCAAAAGCTGCAAGAAGAAATACAAGGGAGTGAGAATGAGAAGCTGGGGTTCATGGGTGTCTGAAATAAGAGCTCCAAATCAAAAAACAAGAATTTGGTTAGGCTCTTATTCTACGGCGGAAGCAGCAGCTAGGGCTTACGACGCTGCCCTTTTATGCCTTAGAGGATCTTCAGCAAATTCTAATCTCAATTTTCCTATCTCTTCTTCTTCTTCTTCTTCTTCTTGTTATGATTCTGTTATAACCCAGAAAAACTCCATTGTTATGTCTCCGAAGTCCATTCAAAGAGTTGCAGCCGCTGCAGCCAACACTTTGGCTGAAAAGAGACAAAACTCCATTAACACTCCAGCTTCGTCTTCAGTTTCATCCCCATCTAATTCCAATCCCCATGATGAGCATGAATTTTCTATGATATCAACCTCCGAGTCCCACAGTATTTTTCACCAGGGCATTGAATCAACTGCCATGATGGAATCATTATCATGGTACTTCTTTGATGACCCACAGACACAGTCGCCAAAATATGTTGACCAATTCATCAATGGTGCCTTGATCGACCGACTCGACCCACCTCTGGCTATGGCAGATGAATTCTACGAAGAAAGTGATATTCGTTTATGGAGTTTCTGTTGA 2100 44.9 MAANVILPLLLSFSFLHSYALDLNDDSQDSPISRFQRYLRINTAHPNPDYSSAVSFLNSQALSLGLHTQTLEFASGKPLLLLTWYGSNPSLPSILFNSHIDSVPAEPSKWLHPPFSAFLSSDGKIFARGSQDDKCIGIQYLEAIRNLKRRNFAPLRTIYVSYVPDEEIGGLDGAMKFTASKHFKELNIGFVLDEGQASPNDEFRVFYADRTPWGLKIKANGTPGHGSRMYDNSAMENLMKSIEVVSKFREIQFDIVKAGEAANSEVISVNSVYVNAGISSPTGFVMNMQPSEAEAGFDLRLPPMADPDLLKRRIAEEWAPARRNMTFQIIEKGPMRDNTGRPLMTPTNNSNPWWPVFEKAIKDAGGKLSKPEILASTTDARYVRQLGIPALGFSPMKNTPILLHDHNEFLTDIIFLEGIKVYESIISALSSFEETPELILLPVSISPLHLLEIEATLHLLTKMVKKELKNQGGLSRSMAEKSGKSPLSLPKSCKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLRGSSANSNLNFPISSSSSSSSCYDSVITQKNSIVMSPKSIQRVAAAAANTLAEKRQNSINTPASSSVSSPSNSNPHDEHEFSMISTSESHSIFHQGIESTAMMESLSWYFFDDPQTQSPKYVDQFINGALIDRLDPPLAMADEFYEESDIRLWSFC 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1798920 1805781 + BLOR08675 Blo18g00187 73491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00187 699 Pfam Peptidase dimerisation domain 212 316 IPR011650 -
Blo18g00187 699 Gene3D Zn peptidases 22 214 - -
Blo18g00187 699 Gene3D - 215 324 - -
Blo18g00187 699 ProSiteProfiles AP2/ERF domain profile. 496 555 IPR001471 GO:0003700|GO:0006355
Blo18g00187 699 Gene3D - 351 432 - -
Blo18g00187 699 Pfam Peptidase family M20/M25/M40 95 427 IPR002933 GO:0016787
Blo18g00187 699 Gene3D AP2/ERF domain 495 557 IPR036955 GO:0003700|GO:0006355
Blo18g00187 699 MobiDBLite consensus disorder prediction 597 623 - -
Blo18g00187 699 PANTHER PUTATIVE-RELATED 18 435 - -
Blo18g00187 699 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 27 432 IPR010159 GO:0004046|GO:0005737|GO:0006520
Blo18g00187 699 Pfam AP2 domain 496 545 IPR001471 GO:0003700|GO:0006355
Blo18g00187 699 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 320 IPR036264 -
Blo18g00187 699 SUPERFAMILY DNA-binding domain 496 556 IPR016177 GO:0003677
Blo18g00187 699 SUPERFAMILY Zn-dependent exopeptidases 22 429 - -
Blo18g00187 699 SMART rav1_2 496 561 IPR001471 GO:0003700|GO:0006355
Blo18g00187 699 CDD M20_AcylaseI_like 29 430 - -
Blo18g00187 699 CDD AP2 495 556 IPR001471 GO:0003700|GO:0006355
Blo18g00187 699 PRINTS Ethylene responsive element binding protein signature 497 508 IPR001471 GO:0003700|GO:0006355
Blo18g00187 699 PRINTS Ethylene responsive element binding protein signature 519 535 IPR001471 GO:0003700|GO:0006355
Blo18g00187 699 PANTHER AMINOACYLASE-1 18 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00163 Blo-Chr2:1432366 Blo18g00187 Blo-Chr18:1798920 0 dispersed
Blo18g00187 Blo-Chr18:1798920 Blo09g00093 Blo-Chr9:1750154 6.46E-22 dispersed
Blo18g00187 Blo-Chr18:1798920 Blo12g00962 Blo-Chr12:27752920 1.75E-21 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13572 PF01546 Peptidase_M20 3.50E-31 CL0035 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00187 K14677 - jre:108988347 678.707