Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00190 ATGGTGAATGTGGCGGTGGAGAGGGTTCACGATATTGCAAATTCAGTGACTAAATTCTCGGCCATTATACCTGAAGAGTTCGTCAGATTAGAGACTGAGCAGCCGGGGATCACCACCGTCCACGGCATAGAACTGGGCGTTCCGACCATTGATTTCGGCAACCCAGATGAGGAACGTTTGTTATCTGCTGTTGCTGAAGCTAGCAAAAACTGGGGGATGTTTCAGATCGTCAACCATGGAATTCCAAACGAAGTTATAAGGAAATTGCAGGAGGTTGGAGAGGAGTTCTTCCTTCTTCCTCACGAGGAGAAGGAGGTTTATGCTAAGCCTCCTGATTCTAAATCAATCGAAGGGTATGGAACTAAGCTTCAGAAAGAAACAGACGGGAAGAAAGGATGGGTTGATCATTTGTTTCATAAAATATGGCCTCCTTCCTCCATTAATTATCAGTTTTGGCCAAAAAAACCTTCCTCTTACAGAGAAGCGAACGAAGAGTACGCAAAGTACATGCGACAAGTAGTGAAGCAGCTGTTTAGGACTTTGTCATTAGGGTTAGGACTGGAAGGAGGTGAGATGGAGGAAGCATTTGGAGGAGAGAAGTTGGAGTATCTTCTGAAAATAAACTACTATCCACCATGTCCACGCCCTGATCTAGCTCTTGGAGTAGTGGCGCACACCGACATGTCCACTTTAACCATCCTCGTCCCTAACCATGTGCAGGGTCTCCAAGCTTTCAGCGATGGCTGCTGGTTCAACGTCAGATACATTCCAAACGCCCTCGTAGTCCATATCGGCGATCAAATCGAGATCTTGAGCAACGGAGTATACAAGAGCGTGCTTCACCGGACTACAGTGAGCAAAGCGGAGACAAGGATGTCGTGGCCGGTGTTCATCGAACCGCCCCCTGATATGGAGATTGGTCCTCACCCTAAATTAATTGGCCGTGACAATCCTCCTAAGTACAAAACTAAGAAATATGGTGATTATGTGTACTGCAAACTCAACAAGCTTCCTCAATGA 1020 46.47 MVNVAVERVHDIANSVTKFSAIIPEEFVRLETEQPGITTVHGIELGVPTIDFGNPDEERLLSAVAEASKNWGMFQIVNHGIPNEVIRKLQEVGEEFFLLPHEEKEVYAKPPDSKSIEGYGTKLQKETDGKKGWVDHLFHKIWPPSSINYQFWPKKPSSYREANEEYAKYMRQVVKQLFRTLSLGLGLEGGEMEEAFGGEKLEYLLKINYYPPCPRPDLALGVVAHTDMSTLTILVPNHVQGLQAFSDGCWFNVRYIPNALVVHIGDQIEILSNGVYKSVLHRTTVSKAETRMSWPVFIEPPPDMEIGPHPKLIGRDNPPKYKTKKYGDYVYCKLNKLPQ 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1832564 1834987 + BLOR08678 Blo18g00190 73494

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00190 339 Pfam 2OG-Fe(II) oxygenase superfamily 204 300 IPR044861 -
Blo18g00190 339 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 154 IPR026992 -
Blo18g00190 339 SUPERFAMILY Clavaminate synthase-like 20 336 - -
Blo18g00190 339 Gene3D - 4 337 IPR027443 -
Blo18g00190 339 PANTHER OS02G0767300 PROTEIN 17 336 - -
Blo18g00190 339 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 336 - -
Blo18g00190 339 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 300 IPR005123 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00190 K05278 FLS; flavonol synthase [EC:1.14.20.6] - qsu:112004171 501.901
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00190 Blo-Chr18:1832564 Blo18g00535 Blo-Chr18:7316947 2.86E-108 dispersed
Blo11g00063 Blo-Chr11:485296 Blo18g00190 Blo-Chr18:1832564 1.38E-172 wgd
Blo12g00679 Blo-Chr12:25055345 Blo18g00190 Blo-Chr18:1832564 1.46E-101 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g305 . . . . . Bpe04g00480 . . Cmo04g02456 . . . . . . . . . . . . . . . Cla08g00561 Cam08g0978 Cec08g0568 Cco08g0677 Clacu08g0685 . Cre08g0500 . . . . . . . . . Blo18g00190 . Bda01g01416 . . Bma01g00830 . . . . . . Car04g02274 . Cpe01g02036 . . . . . . . . . . . . . . . Lsi08g00410 . Chy03g00353 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003902 1 1 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 2 1 1 1 1 1 1 2 2 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00190 Blo_Chr18 FPKM 1.79607 1.82822 7.57903 6.305491 6.534935 7.166628 6.641483 11.365919 10.230563 10.607465