Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00199 ATGGGGGTTGTTGAACGAGAAGAGGCTGGAGGCACAGGCAGACTTCACGATAGTCTTCGTGAACAGCCAAATTCACCTTCATTTTTAACTTCAAATGATGATGATTCTTCGAGCACAACCACGGAACCTTTTATATCTCCAAATGGAAGGCTGAAGCGGACTATTTCGATCTGGGAAAAGGGTGAGCTTCTGGGTCGAGGATCATTTGGATCGGTGTATGAAGGAATTTCTGGTGATGGGTTTTTTTTCGCTGTGAAGGAAGTTTCACTGCTCGATCAAGGCAATCAGGGACAGCAAAGTATTATACAACTTCAGCAGGAGATTGCTCTTTTAAGTCACTTTGAGCATGAGAATATAGTGCAATATTACGGCACGGAGAAGAATGAATCGCACCTATTCATTTTTCTTGAGCTCGTGACAAAAGGATCTCTTATGAAGCTCTATCAAACGTATCATCTTAAAGATTCCCAAGTTTCTGCATATACAAAACAAATTTTGCATGGTTTGAAATATCTTCATGATCAAAACGTGGTTCACAGAGATATTAAATGTGCAAATATATTAGTGGATGCCAGTGGAGCAGTAAAGCTTGCAGATTTTGCGTTGGCAAAGGCAACAAAATTGAATGATATTCAATCCTGTAAGGGAACAGCATTCTGGATGGCACCTGAGGTCGTTAATAGGAAGAGGCAAGGGAATGGTCTCCCAGCTGATATTTGGAGCCTTGGTTGCACTGTTTTGGAGATGTTAACAAGCAAACTTCCATACTCTGAGTTGGACAATCCAATGGCGGCGTTGTTTAAAATTGGAAGTGGTAAGCCACCAATTGTTCCAGATTCTCTATCAACAGATGCACGTGATTTTGTACTGCAGTGCTTACAGCCTAACCCACATGACCGTCCATCTGCTGCTCAACTCTTGGAGCATCCATTTATGGAGCGATCTCTGCAGGGCTTACAGCCTAACCCACCTGACTGTCCATCTGCTACTCAACTCTCGGAGGATCCATTTGTGAAGCGATGTCTTCCTACTTCCTGCTGCTCAACTCTTGGAGCATCTATTTGTGAAGCGATCTCTTCCTACTTCCGCAAGGGCTCTAACGCGCGAACGAAAGGGGTTTAG 1122 43.58 MGVVEREEAGGTGRLHDSLREQPNSPSFLTSNDDDSSSTTTEPFISPNGRLKRTISIWEKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDQGNQGQQSIIQLQQEIALLSHFEHENIVQYYGTEKNESHLFIFLELVTKGSLMKLYQTYHLKDSQVSAYTKQILHGLKYLHDQNVVHRDIKCANILVDASGAVKLADFALAKATKLNDIQSCKGTAFWMAPEVVNRKRQGNGLPADIWSLGCTVLEMLTSKLPYSELDNPMAALFKIGSGKPPIVPDSLSTDARDFVLQCLQPNPHDRPSAAQLLEHPFMERSLQGLQPNPPDCPSATQLSEDPFVKRCLPTSCCSTLGASICEAISSYFRKGSNARTKGV 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1953006 1958640 - BLOR08687 Blo18g00199 73503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00199 373 MobiDBLite consensus disorder prediction 1 47 - -
Blo18g00199 373 SMART serkin_6 58 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00199 373 Gene3D Transferase(Phosphotransferase) domain 1 56 320 - -
Blo18g00199 373 MobiDBLite consensus disorder prediction 1 15 - -
Blo18g00199 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Blo18g00199 373 SUPERFAMILY Protein kinase-like (PK-like) 37 333 IPR011009 -
Blo18g00199 373 Pfam Protein kinase domain 59 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00199 373 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 5 316 - -
Blo18g00199 373 MobiDBLite consensus disorder prediction 18 47 - -
Blo18g00199 373 ProSiteProfiles Protein kinase domain profile. 58 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00199 373 ProSitePatterns Protein kinases ATP-binding region signature. 64 86 IPR017441 GO:0005524
Blo18g00199 373 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 5 316 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00687 Blo18g00199 CCT
Blo17g00197 Blo18g00199 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00224 Blo-Chr13:9434105 Blo18g00199 Blo-Chr18:1953006 8.11E-126 dispersed
Blo17g00831 Blo-Chr17:27019624 Blo18g00199 Blo-Chr18:1953006 4.66E-73 dispersed
Blo18g00199 Blo-Chr18:1953006 Blo05g00537 Blo-Chr5:10594709 5.96E-79 dispersed
Blo18g00199 Blo-Chr18:1953006 Blo18g00200 Blo-Chr18:1958900 2.69E-41 tandem
Blo11g00060 Blo-Chr11:458821 Blo18g00199 Blo-Chr18:1953006 6.68E-116 wgd
Blo12g00687 Blo-Chr12:25113978 Blo18g00199 Blo-Chr18:1953006 4.52E-155 wgd
Blo17g00197 Blo-Chr17:1987384 Blo18g00199 Blo-Chr18:1953006 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84815 PF00069 Pkinase 1.80E-66 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00199 K13414 - pop:7460930 457.218