Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00202 ATGGATTCTCTTTCGACGGAGATTTCGAATGTGGAGAAAGAAGGAAGCCATCTTCATGTTGGCGATGAAGGTAGAGCCGGGAAGCTTCAATGGCTTCTGGATTGTCCAGAACCTCCCTCTATGTGGCATGAGTTCATTGGTTGTCTCAAAGAAGCTTTCGTTCCTCGTATCAACAGACCTTCTTCTTCTTCAGAGAAGCAGAAAGTCTCTCTGCGTGTTGTTTCAGTCGTGCGAGGTGTTTTTCCGATTCTTAGTTGGGGAAGAAACTACAAAGCTTCCAAGTTTCGGAGGGATCTAATGGCCGGTTTAACTCTAGCCAGTCTTAGCATTCCTCAGAGTATTGGGTATGCTAATTTGGCAAAGCTTGATCCACAGTATGGTTTATACACAAGCGTCGTTCCACCATTGATCTATTCATTACTGGGAAGTTCAAGAGAGCTAGCTATAGGACCAGTGGCTGTGGTTTCTTTGCTTTTATCCTCCATGCTTCAGAAAATTCAAGACCCTTTTGCAGACCCGATTGCCTACAGAAAACTCGTCTTCACCGTCACTTTCTTTGCTGGATCATTTCAAGCAGCATTTGGATTATTTAGGTTGGGGTTTTTGGTAAATTTTCTTTCGCATGCTGCAATTGTTGGATTCATGGGAGGAGCCGCCATTGTTATAGGCCTTCAGCAGCTTAAAGGTCTTCTGGGTATCGCTCATTTCACTACCAGCACAGATATTATCTCCGTCTTACACTCTGTTCTTCAGTCTTTTCACCACTCTTGGTACCCTCTGAATTTTGTTCTTGGCTGTTCATTCTTCATCTTCCTTCTACTGGCGAGATTCATTGGAAGAAGAAACAGAAAGCTGTTTTGGCTACCGGCAATTGCTCCATTAATATCAGTTATATTATCGACTCTGATCGTGTTTTTGACAAAAGCTGATAAACATGGTGTTAAAATTGTGAAACATATTGATAGAGGAGTGAATCCCAGCTCTGTTCATCAGCTACAACTTCACGGCCCTCATGTTGGGCAAGCTGCAAAAATTGGCCTGATTTCAGCCCTAATCGCTCTCACTGAAGCTATTGCAGTGGGAAGATCTTTTGCTTCCATCAATGGCTACCACCTTGATGGTAATAAAGAAATGGTGGCCATGGGGTTCATGAACATTGCAGGCTCTTTCACTTCTTGTTATGTTGCCACTGGTTCTTTTTCGAGGACTGCAGTGAATTTCAGCGCGGGATGTGAGACGGTGGTGTCAAACATCGTAATGGCGATAACGGTTATCGTGTCATTAGAATTGTTCACAAGATTCCTCTACTATACTCCCATGGCTATTCTTGCTTCCATCATCTTATCGGCTTTGCCAGGACTCATCGACTTGAATGAAGCTCATCACATATGGAAAGTGGACAAGCTTGATTTCTTAGTTTGCCTTGGAGCTTTTCTCGGGGTCTTATTCGTTTCTGTTGAGATTGGTCTTCTTGCTGCGGTAGCAATTTCATTTGCAAAGATATTACTCAATTTTATTCGACCCGTTGTCGAACTAGTTGGAAGACTACCAACAACTGATATCTTTTGTAATGTTCGACAATACCCTATGGCCACAAAAACTCGAGGAATTATCGTTCTTCGAATTAATACTGGGTTCCTTTGTTTTGCTAATGCTGATTTCATTAGAGACAAGGTTATGAGATGGATTGCAGAAGAAGAAGACCACAATGATTTTGTTGTAGTTGAAAATGGGAAAGAAAACGTCAAATTGGTAGTTCTTGATATGGCTGTCGTGATGAATGTGGATACTGCAGGAATTATCGCATTGGAGGAACTGCATAAGAAGCTTATTTCCATTGGCGTAGAATTAAATATAGCAAACCCAAGATGGGAAGTGCTTCACAAGCTGAAGATGGTGAAGTTCATAGACAGAATTGGAGGCAGAGTTTTTGGGTCCGTTGCTGAAGCTGTCCAAGCTTCTTCCCCATCTAAATTGCCTACTTGA 1986 42.35 MDSLSTEISNVEKEGSHLHVGDEGRAGKLQWLLDCPEPPSMWHEFIGCLKEAFVPRINRPSSSSEKQKVSLRVVSVVRGVFPILSWGRNYKASKFRRDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYSLLGSSRELAIGPVAVVSLLLSSMLQKIQDPFADPIAYRKLVFTVTFFAGSFQAAFGLFRLGFLVNFLSHAAIVGFMGGAAIVIGLQQLKGLLGIAHFTTSTDIISVLHSVLQSFHHSWYPLNFVLGCSFFIFLLLARFIGRRNRKLFWLPAIAPLISVILSTLIVFLTKADKHGVKIVKHIDRGVNPSSVHQLQLHGPHVGQAAKIGLISALIALTEAIAVGRSFASINGYHLDGNKEMVAMGFMNIAGSFTSCYVATGSFSRTAVNFSAGCETVVSNIVMAITVIVSLELFTRFLYYTPMAILASIILSALPGLIDLNEAHHIWKVDKLDFLVCLGAFLGVLFVSVEIGLLAAVAISFAKILLNFIRPVVELVGRLPTTDIFCNVRQYPMATKTRGIIVLRINTGFLCFANADFIRDKVMRWIAEEEDHNDFVVVENGKENVKLVVLDMAVVMNVDTAGIIALEELHKKLISIGVELNIANPRWEVLHKLKMVKFIDRIGGRVFGSVAEAVQASSPSKLPT 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1993718 1997464 + BLOR08690 Blo18g00202 73506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00202 661 CDD STAS_SulP_like_sulfate_transporter 528 644 - -
Blo18g00202 661 Gene3D STAS domain 507 656 IPR036513 -
Blo18g00202 661 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Blo18g00202 661 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 18 659 - -
Blo18g00202 661 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Blo18g00202 661 Pfam STAS domain 528 650 IPR002645 -
Blo18g00202 661 ProSiteProfiles STAS domain profile. 545 654 IPR002645 -
Blo18g00202 661 PANTHER SULFATE TRANSPORTER 18 659 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo18g00202 661 TIGRFAM sulP: sulfate permease 82 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo18g00202 661 SUPERFAMILY SpoIIaa-like 533 653 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00101 Blo-Chr6:4206792 Blo18g00202 Blo-Chr18:1993718 0 dispersed
Blo12g00695 Blo-Chr12:25205369 Blo18g00202 Blo-Chr18:1993718 0 dispersed
Blo18g00202 Blo-Chr18:1993718 Blo11g00047 Blo-Chr11:377552 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00202 K17469 - cit:102620800 933.71