Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00245 ATGGTGTGTATGGGTTCTCCGGTGGAGAAAGTTCTGAACTGGGAGCTGAAATTGTACTCCACTGCAACTTTGATTGTCGGAACTTCTGAAAATTGCAGTCAAAATCGTTCTTCAATGTCCGTGGCAATGTACTGCGCCAGAAAATTAGGCAAGATCTTCAATGTGATTGCTATGGGGAAGATGAATCCTTTTGTTCGTTGGGCGGTTTTGGTCGTTTTTCTTTCTGGGTTTTTGTCGGCAGACTCGCAGAACGCGACGACGCCGGTGAATGTGGGGTTGGTGCTTGATTTAGATGCAGAAGTTGGGAAGATGGCGCTGAGCTGTATCGATATTGCTCTCTCCGACTTCTATTCCTCCCACAGTGGTTACAAGACCAGGCTCGTACTTAATACCAGAGACTCCATGGAAGACGTTGTTGAAGCTGCAGCTGCAGGCCTCGACCTTATTAAGAATGTGAAGGTGGAAGCTATAATCGGACCGGTGAGTTCGATGCAAGCTACTTTCTTGATTGAACTCGGAACTAAAGCTCAGGTTCCCATTATTTCATTTTCAGCCACGAGTCCTGTGCTAACATCTATTCAGAGCCCGTATTTTTTCCGCATCGCACAACAGGACTCGACTCAAATTCAAGCCATTTGTTCAATTATTCAAAATTTTGGGTGGAGAGAAGTGGTACCAATATACGTAGATAATGAGTTTGGGCAGGGAATTGTACCCTACTTGGCCGATGCATTACAGGGCATTGACGCTCACATGCCGTATAGAAGTGCTATTCCTTCGGCGCCCACTAATGATCAAATTGCAGCGGAGCTGTACAAGCTGATGACCATGCAGACTAGAGTTTTTGTTATCCATCTCCTACCTAGTTTGGCTTCGACCATTTTTAAAATTGCAAAAGATATTGGGATGATAAGCGAAGGCTATGTTTGGATCATGACCGATTCCATCGCTGATCTTTTGACTCAAATAGACCAGTCGGTTTTCGATTCGATGCAAGGGGTGCTGGGCGTGAAGACTTATGTTCCGAGATCGGTCCAGGAAGATGATTTCAAAGTGAGATGGAAAAGGAAGTTTCGGCAGGATAATCCGACCGATCTTGATGCTCAACTTAATGTTTTTGGACTGTGGAGCTATGATGCGGCTTGGGGATTAGCCATGGCTGTCGAGGCAGCCCTTTCGACGTCAAACCTTGGCTATCAAAAATCCAATAGCTCCACCAATAGAACTGATCTCGACACTTTTGGGGTTTCTCTGAATGGCCCCAGAATTCGCGACGAGCTGTCCAACACGGCATTTACAGGACTTAGCGGGAATTTCAGCCTGGTGGACGGCCAATTGCAGTCTACTACTTTTGAAATAGTGAATATAAATGGTCAAACAGGGAGAACCATTGGATATTGGACGCCCAAAACTGGTCTCTCAAGAAATTTGATTTCATCTTCATCGGCTGGAGCACCTCTAGGCCCAATCCTATGGCCAGGAGATTCTACTTCAATTCCAAAGGGATGGGAGATTCCAACAAATGGGAAGAAACTGAGAGTAGGAGTTCCTTACAAGGTCGGATTCAGCGAATTTGTGAAAAGGGATCTCACCTCTCATACTTTTAAAAATAAGGATATAAACGAAGGACGGGGAATTAGCCCCGGTAATGGAGGACCAGGTTTTGTGGTGGCCTCACCAGAATTCAATTTCACCCGAAGTCCATCAGACCATTCAATCAGCGAGGAAGGGAATGTTCGGTTCTTCATACAGGAAGAAAGAATTTCCTATGAGGCCGGGGAATCGAGCCACATCGCCGGAGCTTCACCGAATATTATGCCGGCGATTGAGATGTGTACTCAAAATCCAGAGATGATAGCAAGATAA 1866 45.66 MVCMGSPVEKVLNWELKLYSTATLIVGTSENCSQNRSSMSVAMYCARKLGKIFNVIAMGKMNPFVRWAVLVVFLSGFLSADSQNATTPVNVGLVLDLDAEVGKMALSCIDIALSDFYSSHSGYKTRLVLNTRDSMEDVVEAAAAGLDLIKNVKVEAIIGPVSSMQATFLIELGTKAQVPIISFSATSPVLTSIQSPYFFRIAQQDSTQIQAICSIIQNFGWREVVPIYVDNEFGQGIVPYLADALQGIDAHMPYRSAIPSAPTNDQIAAELYKLMTMQTRVFVIHLLPSLASTIFKIAKDIGMISEGYVWIMTDSIADLLTQIDQSVFDSMQGVLGVKTYVPRSVQEDDFKVRWKRKFRQDNPTDLDAQLNVFGLWSYDAAWGLAMAVEAALSTSNLGYQKSNSSTNRTDLDTFGVSLNGPRIRDELSNTAFTGLSGNFSLVDGQLQSTTFEIVNINGQTGRTIGYWTPKTGLSRNLISSSSAGAPLGPILWPGDSTSIPKGWEIPTNGKKLRVGVPYKVGFSEFVKRDLTSHTFKNKDINEGRGISPGNGGPGFVVASPEFNFTRSPSDHSISEEGNVRFFIQEERISYEAGESSHIAGASPNIMPAIEMCTQNPEMIAR 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2464399 2467795 - BLOR08733 Blo18g00245 73549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00245 621 Gene3D - 416 515 - -
Blo18g00245 621 PANTHER OS06G0188250 PROTEIN 68 533 - -
Blo18g00245 621 Gene3D - 206 368 - -
Blo18g00245 621 PANTHER OS06G0188250 PROTEIN 68 533 - -
Blo18g00245 621 Pfam Receptor family ligand binding region 107 458 IPR001828 -
Blo18g00245 621 CDD PBP1_GABAb_receptor_plant 90 477 IPR044440 -
Blo18g00245 621 SUPERFAMILY Periplasmic binding protein-like I 87 504 IPR028082 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00245 Blo-Chr18:2464399 Blo18g00248 Blo-Chr18:2559804 1.95E-42 dispersed
Blo18g00245 Blo-Chr18:2464399 Blo18g00246 Blo-Chr18:2472502 1.43E-16 tandem
Blo17g00264 Blo-Chr17:2724289 Blo18g00245 Blo-Chr18:2464399 2.84E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00245 K05387 - pop:18107187 573.548