Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00246 ATGAGTTTGGGCAGGGAATTGTACCCTACTTGGCCGATGCCTTACCCCTGTAAGGCTCACATGCCTTATAGAAGTGTTATTCCTTCGTTACCCACTAATGATCAAATTGCAGCGGAGCTTTACAAGTTGATGACCATGCAGACTAGAGTTTTTGCTATCCATCTCCTACCTAGTCTGGCTTCGACCATTTTTAAAATTGCAAAAGATATTGGGATGATGAGCGAAGGCGATGTTTGGATCATGACCAATTCGATCACTGATCTTTTGACTCAAATAGACGAATCGGTTTTCGATTCAATGCAAGGGGTGCTGGGCGTGAGGACTTATGTTCCGAGATCGGACAAGCTAGTTCATTTCAAAGTGAGATGGAAAAGGAAGTTTCGGCAGGATAATCCGACCGATCTTGATGTTCAATTGAATGTTTTTGGACTGTGGAGTTATGATGCGGCTTGGGGATTAGCCATGGCTCTGTCCAACACGGCATTTACTGGACTTAGCGGGAATTTTAGCTTGGTGGACGGCCAATTGCAGTCTACAACTTTTGAAATAGTGAATATAAATGGTCTTACAGGGAGAACCATTGGATATTGGACGCACAAGACTGGTCTCTCAAGATATTTGATTTCATCTTCTTCAGCTGGAGCTGGAGCAACTCTAAGGACAATCCTATGGCCAGGAGATTCTACTTCAACTCCAAAGGGATGGGAAATTCCAACAAATGGGAAGAAACTGAGAGTAGGAGTTCCTTACAAGGTCGGATTCAGCGAATTTGTGAAAGTAACAAATGATTCCATCTCAAATGCCACAATCGTCACAGGCTACTGCATAGACGTCTTCAATGCAGTTATTGAGAAGCTGCCTTACGCCATTGTTCCAGACTTCATCCCCTATAACCCCAGCCCTAATTTTCCATACGATGAAATGATCTACCAAGTCAAACTCGGGAACTTCGACGCAGTAGTGGGGGATGTGACGATCACTTGGAATAGATCTCGGTTCGTAGATTTTACGTTACCATTCACTGAATCAGGAGTGATAATGGTGGTGCCCCTGACAGACAACTCGAAGAAGAACACATGGGTGTTCTTGCGGCCTCTGTCGTTGGATCTTTGGATGACAAGTGGTTGCTTCTTCATCTTCATCGGCTTCGTCGTTTGGGTTTTAGAGCACAGAATAAATGAAGATTTCAGGGGGCCCTGGACTCATCAGCTGGGCACTAGTCTCTGGTTCTCCTTCTCCACCATGGTTTTTGCGCACAGGGAGAGAGTGGTTAGCAATTTCGCTAGATTCGTGGTGGTGATATGGTTCTTCGTCGTGCTTATTCTGACCCAGAGCTACACTGCCAGTTTAACCTCGCTTCTCGTCGAACAGCTACAACCTACTGTAAATGATGTGGATCAGCTTTTGAAGAACAAGGAAAGAGTCGGCTACCCAGATGCTTCTTTTGTCCGGGGAATTTTGATTTCCTCAAAATTTGACCATGACAAGCTTGTAGCCTATGGTAGCCCAGAAGAATTAGATGACCTACTCTCCAAAGGAAGCGCTAATGGCGGCATTGCAGCAGCGTTTGACGAAATTCCTTACATGAAGCTTTTTCTTTCCAAATACTGCTCAAAATATACCACCGCTAATCCTTCTTATAAAACAGACGGGTTCGGATTTGTATTTCCACAAGGCTCCCCACTTGTGGCTGATATATCAAGGCAAATACTGAGCGTAACAGAGGGAGACGAGATGAAACTGATCGAACAGAAATGGTTAGGCCAAGCAACCTCCTGCTCAACTTCCAGTCCCGATCTTACTTCAACGAGCCTCAATCTCAGTCGCTTTTGGGGCCTTTTTCTCATTGCTGGAATAGCTTCAGCGTTAGCCCTAATTTCAAGCGCCATAAAATTTCTTTACGAGCAAAGGCATCTCCTCCTCCAAACGGACCCAAATACGTCGATCTGGAGTAGAATCAAAACAGTATTAAGACTATACAACCAGAGGGATCTCACCTCTCATACTTTCAAAAATAAGGATATAAACGAACCAAGGGGAGGACCAGAGCAAGAAAGAATTTCGCATGAGGCCGGGGAATCGAGCCCCAGCGTCGGAGCTTCACCGAATATTAGGCCGGCGATTGAGCTGTGTACTCAAGATCCAGAGATGATAGCAAAGAAAGCAGAGGTTTCAGAAAAGGGAGAGCCAAAGGAGGGTGAGATTTGTGTGAGAAATCAAGCAATTGGTCTTAATTTTATCGATGTGTATTTCCGAAAAGGAGTTTACAAGGCTGCTGCTATCCCTTTCACTCCAGGATTTGAAGTTGCTGCAATGGTAATAGTCTTGGGCCCTGGAGCAAGTGAGTATAAAGTTGGAGATATTGTGGCTTATGCTGGTGGTCCAATGGGATCATATGCTGGAGAGCAAATCCTTCCTGCTAACAAAATAGTACCAGTTCCTGCCTCTATCAATCCAGTAATAGCCGCATCAATCATGCTCAAGGACATGGCTGCTCAGTTTCTTCTCTGCAGTTGCTTCAAGGATGAATCTGGTCATGTTGTGTTGATTCATGCGGCAGTAGGAGTTGGATCTTTGTTATGCCAATGGGCAAATAGCCTTGGAGCCACTGTGATTGGTACGGTTTCGACAAAGGAGAAAGTTTCTCAAGCCAAAGTCGATGGCTGCCATCATGTAATAATCCACAAGGAAGAGAATTTTGTCGATCGAGTCACCGAAATTACATCAGGCAACGGAATTGATGTTCATGTACTGAGTGAGGAACAGATGAAGGAACTGATCTATAGAGAGAGGCTCTTTCTTCTTCCTGTTGGTAGTTGGGTTCCTTATGTGTACGTATATTTAAGCTCCATCCCAAAACTGGATGGCTTTGGAATCCAGTCAATGATTTATGGCCAGCAGGAACCAAATGTTCTTCGTTGTTGCTGCTTCGATTTTGACCTCAGCTTCTTTTCCTTCTTCGTTCTCTTAGACCTCGACTTTGATCTTCTTGATTCTCTCTCCTCTTCCTTGATGCTACATAAATCCGAGGATGATTCGGATAAACTCGGCCTATATGACATTCTGCAATTTCAGACTACGAAAAAGGAGGAGTTTCAGAGCTCGAGCAACTCATCAATGGCGACCAAAGGAACCAGAAAGAAAAATGGGGAAGAAGAAGAGGAAGAAGAAGAGGAGCTGAAAAAGGAGAAGAAGATATTGAAGAAGCTTAAATCAATCAAGCTTTTACGATCTCCCAGCTTGAAACCACGGAGAAGAAAATCGAAATCTCAGTCGCGTTTTAATATTCTTCTCTCGTCGTCTTTTTTGTCTTGTTATTCGTCTTCTTCTTCTTCATGGACTTCGAACCAGTCCAGCCCTACTTCTGCGTCGGATTTTGTATCTTCTCCCAATTACATGAAACCCACTTCATGTTCTGATGCAAGGAAGGAGAATTTTCAGAAATTAGCTGCAAAATCGAGTGGGAGACTTTCTTCTAAGTCTGTCAAGAGCGAGATGAAGAAATTTTCGAGTAGATTCGGTGACTTCGAATCTGGTATGAATCCGAATGTTTCGGTTTCTTCGAACGGGAAATCGATTTCTTCTGGTCAGAGATCAGGTTTTGTCTCGAAATGTCCATGA 3621 44.02 MSLGRELYPTWPMPYPCKAHMPYRSVIPSLPTNDQIAAELYKLMTMQTRVFAIHLLPSLASTIFKIAKDIGMMSEGDVWIMTNSITDLLTQIDESVFDSMQGVLGVRTYVPRSDKLVHFKVRWKRKFRQDNPTDLDVQLNVFGLWSYDAAWGLAMALSNTAFTGLSGNFSLVDGQLQSTTFEIVNINGLTGRTIGYWTHKTGLSRYLISSSSAGAGATLRTILWPGDSTSTPKGWEIPTNGKKLRVGVPYKVGFSEFVKVTNDSISNATIVTGYCIDVFNAVIEKLPYAIVPDFIPYNPSPNFPYDEMIYQVKLGNFDAVVGDVTITWNRSRFVDFTLPFTESGVIMVVPLTDNSKKNTWVFLRPLSLDLWMTSGCFFIFIGFVVWVLEHRINEDFRGPWTHQLGTSLWFSFSTMVFAHRERVVSNFARFVVVIWFFVVLILTQSYTASLTSLLVEQLQPTVNDVDQLLKNKERVGYPDASFVRGILISSKFDHDKLVAYGSPEELDDLLSKGSANGGIAAAFDEIPYMKLFLSKYCSKYTTANPSYKTDGFGFVFPQGSPLVADISRQILSVTEGDEMKLIEQKWLGQATSCSTSSPDLTSTSLNLSRFWGLFLIAGIASALALISSAIKFLYEQRHLLLQTDPNTSIWSRIKTVLRLYNQRDLTSHTFKNKDINEPRGGPEQERISHEAGESSPSVGASPNIRPAIELCTQDPEMIAKKAEVSEKGEPKEGEICVRNQAIGLNFIDVYFRKGVYKAAAIPFTPGFEVAAMVIVLGPGASEYKVGDIVAYAGGPMGSYAGEQILPANKIVPVPASINPVIAASIMLKDMAAQFLLCSCFKDESGHVVLIHAAVGVGSLLCQWANSLGATVIGTVSTKEKVSQAKVDGCHHVIIHKEENFVDRVTEITSGNGIDVHVLSEEQMKELIYRERLFLLPVGSWVPYVYVYLSSIPKLDGFGIQSMIYGQQEPNVLRCCCFDFDLSFFSFFVLLDLDFDLLDSLSSSLMLHKSEDDSDKLGLYDILQFQTTKKEEFQSSSNSSMATKGTRKKNGEEEEEEEEELKKEKKILKKLKSIKLLRSPSLKPRRRKSKSQSRFNILLSSSFLSCYSSSSSSWTSNQSSPTSASDFVSSPNYMKPTSCSDARKENFQKLAAKSSGRLSSKSVKSEMKKFSSRFGDFESGMNPNVSVSSNGKSISSGQRSGFVSKCP 1206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2472502 2481325 - BLOR08734 Blo18g00246 73550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00246 1206 MobiDBLite consensus disorder prediction 1030 1044 - -
Blo18g00246 1206 Gene3D - 359 477 - -
Blo18g00246 1206 MobiDBLite consensus disorder prediction 670 690 - -
Blo18g00246 1206 Gene3D - 17 136 - -
Blo18g00246 1206 CDD GluR_Plant 242 587 - -
Blo18g00246 1206 MobiDBLite consensus disorder prediction 1176 1206 - -
Blo18g00246 1206 MobiDBLite consensus disorder prediction 1030 1060 - -
Blo18g00246 1206 PANTHER GLUTAMATE RECEPTOR 2.9 18 683 - -
Blo18g00246 1206 SUPERFAMILY Periplasmic binding protein-like I 26 236 IPR028082 -
Blo18g00246 1206 SUPERFAMILY GroES-like 726 849 IPR011032 -
Blo18g00246 1206 MobiDBLite consensus disorder prediction 670 699 - -
Blo18g00246 1206 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 818 916 IPR036291 -
Blo18g00246 1206 MobiDBLite consensus disorder prediction 1172 1206 - -
Blo18g00246 1206 MobiDBLite consensus disorder prediction 1110 1140 - -
Blo18g00246 1206 Pfam Ligand-gated ion channel 590 620 IPR001320 GO:0015276|GO:0016020
Blo18g00246 1206 Gene3D - 828 916 - -
Blo18g00246 1206 Pfam Zinc-binding dehydrogenase 855 915 IPR013149 -
Blo18g00246 1206 Pfam Receptor family ligand binding region 24 192 IPR001828 -
Blo18g00246 1206 SUPERFAMILY Periplasmic binding protein-like II 218 589 - -
Blo18g00246 1206 SMART PKS_ER_names_mod 713 972 IPR020843 GO:0016491
Blo18g00246 1206 SMART GluR_14 243 589 IPR001320 GO:0015276|GO:0016020
Blo18g00246 1206 Gene3D - 534 595 - -
Blo18g00246 1206 Gene3D - 137 242 - -
Blo18g00246 1206 Coils Coil 1050 1073 - -
Blo18g00246 1206 Gene3D - 726 827 - -
Blo18g00246 1206 Pfam Alcohol dehydrogenase GroES-like domain 733 791 IPR013154 -
Blo18g00246 1206 Gene3D - 243 358 - -
Blo18g00246 1206 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 18 683 - -
Blo18g00246 1206 Pfam Bacterial extracellular solute-binding proteins, family 3 271 589 IPR001638 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00648 Blo-Chr1:7319776 Blo18g00246 Blo-Chr18:2472502 3.50E-123 dispersed
Blo06g01064 Blo-Chr6:34001164 Blo18g00246 Blo-Chr18:2472502 1.01E-99 dispersed
Blo09g00383 Blo-Chr9:14669400 Blo18g00246 Blo-Chr18:2472502 1.33E-13 dispersed
Blo16g00806 Blo-Chr16:33825558 Blo18g00246 Blo-Chr18:2472502 1.68E-83 dispersed
Blo18g00246 Blo-Chr18:2472502 Blo18g00248 Blo-Chr18:2559804 0 dispersed
Blo18g00245 Blo-Chr18:2464399 Blo18g00246 Blo-Chr18:2472502 1.43E-16 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00246 K05387 - twl:120005605 787.719