Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00257 ATGACACCTTCATTTCTGAGCGTAGTCTCTCTCTACAGCCGCTATCTTTCTCACTGCTTCACTTCCGCTGGTCTCATTCGACACACAATCGACATCGACGATGAAACGACGATGGCCTTCTGGGGGCCCAAACCCAACACTAAACGAACCGAGGAAAAAACTCCTCTCATCTTGATTCACGGCTTCGGTCCTATAGCGATCTGGCAATGGCGGAATCAAGTAAAGTTCTTTGCGCCTGAATTCGACGTCTACGTTCCTGATCTCGTCTTCTTTGGCGACTCAACTACCAGATCATCGGAGAGAACAACACTTTTTCAGGCCGTTTCCGTCGGAAAGCTAGTAGACAAGCTCGGATTGAAGAAACTTCACATGATGGGCACTAGCTATGGCGGAATCATCACATACCACGTGGCGAGGTTGTTGCCGGAGAGAGTGGAGAAGGTGATAATCGCCAGCTCAGCGATCAACAGAAGAAGGAAAGATATCGAGGCGTTACTCCAGAGAGCAAAAGTTGAGAGAATTGAGGATCTAATGCTACCATCAACGGCGAAAGAGTTACGCCGGCTGATGGCGTTTGCTACGAATAATCGCATGCTTGGAATGTTACCGGATTTCGTCCTCAACGACTTCTTAAAAACGTTTTACTCGAAGAACAGGGAGGAGAAATTGGAGCTACTTAGGGGGCGGACGGTCGGAATAGATGATACTGTGAATATTTCTTCCCTTCATCAGGAGGTTTTGATTATAATGGGAGAGCACGACCATATCTTCCCGTTGGAGTCAGCTGCTGAGTTCACACAGATTATTGGAGAAAAAGCGAAACTAGAGGTGATTAAAAAGTCAGCTCACATTCCCCAGGTTGAATGCCCAAAACAATTCAACACCATTGTCCGAAGCTTTCTAAGTGGCGACTGA 915 47.1 MTPSFLSVVSLYSRYLSHCFTSAGLIRHTIDIDDETTMAFWGPKPNTKRTEEKTPLILIHGFGPIAIWQWRNQVKFFAPEFDVYVPDLVFFGDSTTRSSERTTLFQAVSVGKLVDKLGLKKLHMMGTSYGGIITYHVARLLPERVEKVIIASSAINRRRKDIEALLQRAKVERIEDLMLPSTAKELRRLMAFATNNRMLGMLPDFVLNDFLKTFYSKNREEKLELLRGRTVGIDDTVNISSLHQEVLIIMGEHDHIFPLESAAEFTQIIGEKAKLEVIKKSAHIPQVECPKQFNTIVRSFLSGD 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2732489 2733761 + BLOR08745 Blo18g00257 73561

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00257 304 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 301 - -
Blo18g00257 304 Pfam alpha/beta hydrolase fold 55 288 IPR000073 -
Blo18g00257 304 Gene3D alpha/beta hydrolase 46 302 IPR029058 -
Blo18g00257 304 SUPERFAMILY alpha/beta-Hydrolases 27 301 IPR029058 -
Blo18g00257 304 PRINTS Alpha/beta hydrolase fold signature 138 151 IPR000073 -
Blo18g00257 304 PRINTS Alpha/beta hydrolase fold signature 124 137 IPR000073 -
Blo18g00257 304 PRINTS Alpha/beta hydrolase fold signature 246 260 IPR000073 -
Blo18g00257 304 PRINTS Alpha/beta hydrolase fold signature 80 95 IPR000073 -
Blo18g00257 304 PRINTS Epoxide hydrolase signature 138 151 IPR000639 GO:0003824
Blo18g00257 304 PRINTS Epoxide hydrolase signature 278 300 IPR000639 GO:0003824
Blo18g00257 304 PRINTS Epoxide hydrolase signature 124 137 IPR000639 GO:0003824
Blo18g00257 304 PRINTS Epoxide hydrolase signature 80 95 IPR000639 GO:0003824
Blo18g00257 304 PANTHER SI:DKEY-122A22.2 5 301 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00257 - - - qsu:112005604 367.851
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo17g00119 Blo18g00257 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00074 Blo-Chr6:2831238 Blo18g00257 Blo-Chr18:2732489 5.00E-40 dispersed
Blo18g00257 Blo-Chr18:2732489 Blo18g00258 Blo-Chr18:2737077 0 tandem
Blo04g00917 Blo-Chr4:10752374 Blo18g00257 Blo-Chr18:2732489 4.19E-48 transposed
Blo17g00271 Blo-Chr17:2823639 Blo18g00257 Blo-Chr18:2732489 2.81E-148 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g411 . . . . . . . . Cmo05g00523 . . . . . Sed04g0141 . . Bhi04g00761 Tan02g2392 Cmetu03g0357 . Hepe10g0498 . Lcy13g1562 Cla08g01109 Cam08g1562 Cec08g1136 Cco08g1262 Clacu08g1266 . Cre08g1046 Cone4ag1334 . . . Lsi04g02234 . . Cme03g01864 Blo17g00119 Blo18g00257 . Bda13g01402 . Bpe14g00453 . Bma02g00142 . . . . Cma05g00500 . . Cpe11g00437 . Bhi09g02434 . . . . Mch11g0665 . Cla11g01381 . Cec11g1465 Cco11g1461 Clacu11g1596 Cmu11g1415 Cre11g1835 Lsi08g00965 Csa02g02150 Chy03g01368 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009871 1 2 3 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00257 Blo_Chr18 FPKM 3.322205 3.323214 0.0 0.0 0.0 0.221567 0.210932 0.0 0.0 0.0