Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00260 ATGGTTCTACGCAACGGTTCTAAGGTGTGGGTTGAAGACAGAGAGCTTGCTTGGGTTGCTGCTGAAGTCATTGATCAAGCTGGTAGACAGTTACGACTTGAAACTGCTTCTGGGAAGAAGGTTTTGGCTTCTTCAGAGAAGGTGTTTCCTAGGGATGCAGATGAGGAGGACCATGGCGGAGTGGATGACATGACGACGTTGACGTATTTGAATGAGCCTGGCGTGCTTTATAATTTGCACAGGAGATATTCTCTCAATGACATATATACATACACGGGTAGCATTTTGATTGCCGTTAATCCATTCACGAAGCTTCCACATCTGTACAATATACATATGATGGAGCAGTATAAGGGTGCTCCTTTTGGCGAACTTAGTCCTCATGTTTTTGCTGTTTCTGATGCTTCATATAGAGCAATGATCAGCGAGGGCCGAAATCAGTCCATATTAGTCAGTGGAGAAAGTGGGGCTGGGAAAACCGAGACAACAAAATTAATAATGCAGTATCTCACATTTGTAGGTGGCCGTGCCTCTGGTGATGATAGGACAGTTGAGCAACAAGTTCTTGAATCAAATCCACTCCTAGAGGCATTTGGGAATGCAAGGACTGTCAGAAATGATAACTCAAGTCGTTTTGGAAAATTTGTAGAGATTCAGTTTGATGCTAGTGGTAGAATATCTGGCGCTGCAATTAGAACTTACCTTTTGGAGAGATCTCGCGTTGTCCAAATAACTGATCCTGAGAGGAACTATCACTGCTTTTATCAGTTGTGTGCATCCGAAAGGGATGCAGAGAAGTATAAGTTAGATCAACCAAGTAAATTCCACTATTTAAATCAAAGCAAAACGTATGAACTTGATGGGGTAAACAGTGCTGAGGAATACATGAAAACCAGGAGGGCAATGGATATCGTTGGAATAAGTCATGATGATCAGGAAGCTATCTTTCGAACCTTGGCTGCAATATTGCACCTGGGCAACATTGAATTTTCTCCTGGGAAGGAGCATGACTCTTCTATTGTAAATGATAAAAAGTCTAGTTTCCATTTACAAATGGCTGCTAATCTTTTCGTGTGTGATGTGAATCTCTTACTTTCAACACTCTGTACGCGCACAATTCAAACTCATGAAGGAAGTATCGTCAAGGCTCTTGATTGTAGTGCTGCAGTTGCTAGTCGGGATGCATTGGCAAAGACAGTTTATGCTCGATTGTTTGACTGGCTTGTTGATAAGATTAACCAATCCGTTGGACAAGACCCAAACTCCAGTATGCAAATTGGGGTATTAGACATTTATGGATTTGAATGCTTCAAGGATAATAGTTTTGAGCAGTTTTGCATCAACTTTGCAAACGAAAAGCTTCAGCAGCATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTATAGCAAAGAAGAAATAAACTGGAGCTACATTGAATTTATAGACAACCAGGATGTTCTTGATTTGATCGAGAAGAAACCTATTGGGATAATTTCTCTGCTTGATGAAGCTTGCCTGTTCCCAAGATCGACCCATGCAACGTTTTCAACCAAATTATTTCATAACTTTCGTGGCCATCCAAGATTGGAAAAGGCAAAATTTTCAGAAACAGATTTTACTGTTTCCCATTACGCTGGAAAGGTTACTTATCATTCAGATTCATTTTTGGATAAAAATCGGGATTACATAGTGGTTGAGCATAGCAATTTATTGTCTTCTTCCAAAAGCACTTTTGTTGCTGGTCTTTTCCCTTCACTTCAAGAAGAATCTTCAAGGTCTTCATACAAGTTTTCTTCTGTGGCCTCTAGATTTAGGCAACAACTTCAAGCACTCATGGTGACCTTGAACACAACAGAACCTCATTATATACGGTGTGTGAAGCCCAATTCTCTTAATCGGCCCCAAAAATTTGAGAATCAGAGTATTCTACACCAGTTACGCTGTGGGGGTGTTTTAGAAGCTGTACGGATAAGTCTGGCGGGTTATCCCACTAGAAGAACATATTCAGAGTTTCTAGATCGCTTTGGATTGTTGGCTCCTGAACTCATGGATGGAAGTTATGATGAAAAAGCTACAACGGAGAAGCTATTACAAACGTTGAAACTAAGGAACTTTCAGTTGGGCAGGACCAAAGTGTTTCTTAGAGCTGGTCAAATTGGCTCTCTAGATGCTCGAAGGTCGGAAGTATTGGATAATGCAGCTAAGTGCATCCAACGTAGACTGCGAACATATTATGCACGCAAGCATTTTCTATTGATCCGCTGTACTGCAGTGGAACTTCAAGCATACTGCAGAGGATATCTTACTCGAAGGATGTATACAGCAAAGCGAGAAACCAATGCTGCTATATTAATACAAAGAAACGTTCGCAAGTGGCTTATACACAGTGCTTACATGACAATTCGTTTTGCGGCTTTAGTTATCCAGTCTAATATTCGTGGTTTCTTAAATCACCAAATGTTTTTGAATCGAAAGAAACATAAAGCGGCGACATTGATTCAGTCTCGATGGAGAACATGCAAGGTTCGTACTGTTTTTCGCCGTGACCAAGCTTCGGTGGTTGCTATTCAGTGCCGTTGGCGGCAAAAGATGGCAAAAAGAGAACTTCGAAGGCTTAAGCAAGAAGCCAATGAAGCTGGGGCATTGCGTTTGGCTAAGAATAAACTTGAGAAGCAAATAGAAGAGCTCACATGGCGGTTACATCTGGAAAAACGATTGCGGGTTTCCAATGAAGAGGCCAAGTCAATAGAAATTTCAAAACTTCAAAAGATGTCGGTCTCTCTTAAAATGGAGTTCGATGAAGCAAAATTAGCAACAATCAACGAGTGGAACAAAAATGCGGTGTTACAGAATCAATTGGAGTTGTCGACAAAAGAGAAGTTTGCTTTGGAAAGAGAAATTATAGCGATGGCAGAGTTGAGAAGGGAAAATGCGTTGCTTAAGAGTTCGTTTAAAGCCCTGGAGAAAAAAGATTCAGCTCTGGAGATTGAACTAATGAAGTATCAAAGAGATAGCAAGGAAACACTTGAGAAGCTGAAGGAAGTTGAACAAAAATGTTCTCAGCTTCAGCAAACTGTGAAAAGTTTGGAGGAAAAAATCTTACTTCTAGAGAATGATAATCATGTCCTGCGACAAAAAGCATTAAGTGCAACTCCCAAGAGCATCCGTCCTGGTATTGTGAAGTCATTAACAGAGGTAGTGATGTTCTTCAATTGTGCAACTAAATCTTCCTGTGCTCAAGGTATTACTCCCCAAACTGATCGGAAATCTTTATTTGAGTCCCCAACGCCAACAAAACCTATGGTACCCTATGCCCATAGCCTAACAGATTCTCGTCGATCAAAGCTGATGATTGAGAGGCATCAGTTTTGTATGAGATGTTTGTTTTCTAAATGGAAAAGTGCAGTTAATATCATCTTACCGCCTGATTTTTTTATTTCTAGAGCATTAAAAAATGAAAACTACGAATTCCTCTCTAGGTGCCTCAAAGAAGATATGGGCTTCAAAGGTGGTAAACCACTTGCTGCATGCGTCATATACAAATGCCTTCTTCATTGGCATGCTTTTGAATCTGAAAGAACAGTTATTTTTGACTTCGTAATTGAAGGGATTAATGAAGCTCTTAAGGTTGGGGATGAAAGAATTACATTGCCATATTGGTTGTCCAATGCATCGGCTCTGCTATGCCTTCTGCAGAGAAATTTACGGTCAAATGGATTTCTTAACACACCTGCTCAGCGTTCTACTGGGTTATCAACCAGAATTGGGCAAGGCCTAAAATCACCTTTAAAACATTTGGGATTTGAAGATGGTATATCTCATCTTGAAGCGAGATATCCTGCTATACTTTTCAAACAGCAACTCACTGCTTGTGTGGAAAAGATATTTGGTTTGATTCGCGACAACTTGAAAAAGGAACTATCTCCACTCTTGGGCTTGTGCATTCAGGCACCAAAAACTACTCGAGTGCATGCTGGAAAATCCTCTAGATCACCTGGTGGACCTCCTCAGCAGTCTCCGAACAGCCAGTGGGATAACATTATCAATTTTTTAGATTCTCTAATGAGTCAATTACGCAGAAATCACGTGCCCTCCTTCTTCATCCGAAAATTAACTACTCAGGTGTTTTCTTTCATCAATATTTCGCTTTTCAATAGTCTTCTACTGCGACGCGAATGTTGTACATTTTCAAATGGAGAATACGTAAAATCTGGGCTAGCAGATCTAGAGAAGTGGATTGTGAATGCCAAAGAAGAGTATGCGGGGACATCATGGCATGAGCTAAATTATATAAGGCAAGCTGTTGGATTTCTGGTTATACATCAGAAGAAAAAAAAATCTCTAGAAGATATAAGCCAGGATCTTTGTCCGGTACTGACTGTTAGACAAATTTATCGGATAAGTACAATGTACTGGGATGACAAATATGGCACCCAAAGCGTGGTCGCTCAAATGAGAGAGATTTTGAACAAGGATAATCAGAACTTGACGTCCAATTCTTTCTTGTTGGATGATGATCTGAGCATCCCATTCTCTACAGAAGACATAGATATGGCTATTCCTGCTATAAACCCATCCGACATTGACCTTCCTAATTTCGTATCAGAACATCCCTGCGTACAGTTTTTGGTCCAGCCTTAA 4647 40.5 MVLRNGSKVWVEDRELAWVAAEVIDQAGRQLRLETASGKKVLASSEKVFPRDADEEDHGGVDDMTTLTYLNEPGVLYNLHRRYSLNDIYTYTGSILIAVNPFTKLPHLYNIHMMEQYKGAPFGELSPHVFAVSDASYRAMISEGRNQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDASGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDAEKYKLDQPSKFHYLNQSKTYELDGVNSAEEYMKTRRAMDIVGISHDDQEAIFRTLAAILHLGNIEFSPGKEHDSSIVNDKKSSFHLQMAANLFVCDVNLLLSTLCTRTIQTHEGSIVKALDCSAAVASRDALAKTVYARLFDWLVDKINQSVGQDPNSSMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIISLLDEACLFPRSTHATFSTKLFHNFRGHPRLEKAKFSETDFTVSHYAGKVTYHSDSFLDKNRDYIVVEHSNLLSSSKSTFVAGLFPSLQEESSRSSYKFSSVASRFRQQLQALMVTLNTTEPHYIRCVKPNSLNRPQKFENQSILHQLRCGGVLEAVRISLAGYPTRRTYSEFLDRFGLLAPELMDGSYDEKATTEKLLQTLKLRNFQLGRTKVFLRAGQIGSLDARRSEVLDNAAKCIQRRLRTYYARKHFLLIRCTAVELQAYCRGYLTRRMYTAKRETNAAILIQRNVRKWLIHSAYMTIRFAALVIQSNIRGFLNHQMFLNRKKHKAATLIQSRWRTCKVRTVFRRDQASVVAIQCRWRQKMAKRELRRLKQEANEAGALRLAKNKLEKQIEELTWRLHLEKRLRVSNEEAKSIEISKLQKMSVSLKMEFDEAKLATINEWNKNAVLQNQLELSTKEKFALEREIIAMAELRRENALLKSSFKALEKKDSALEIELMKYQRDSKETLEKLKEVEQKCSQLQQTVKSLEEKILLLENDNHVLRQKALSATPKSIRPGIVKSLTEVVMFFNCATKSSCAQGITPQTDRKSLFESPTPTKPMVPYAHSLTDSRRSKLMIERHQFCMRCLFSKWKSAVNIILPPDFFISRALKNENYEFLSRCLKEDMGFKGGKPLAACVIYKCLLHWHAFESERTVIFDFVIEGINEALKVGDERITLPYWLSNASALLCLLQRNLRSNGFLNTPAQRSTGLSTRIGQGLKSPLKHLGFEDGISHLEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKTTRVHAGKSSRSPGGPPQQSPNSQWDNIINFLDSLMSQLRRNHVPSFFIRKLTTQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLADLEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKKKKSLEDISQDLCPVLTVRQIYRISTMYWDDKYGTQSVVAQMREILNKDNQNLTSNSFLLDDDLSIPFSTEDIDMAIPAINPSDIDLPNFVSEHPCVQFLVQP 1548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2747475 2764890 - BLOR08748 Blo18g00260 73564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00260 1548 SMART DIL_2 1372 1479 IPR002710 -
Blo18g00260 1548 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 Pfam DIL domain 1373 1476 IPR002710 -
Blo18g00260 1548 Gene3D - 249 306 - -
Blo18g00260 1548 Pfam Myosin N-terminal SH3-like domain 6 47 IPR004009 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 Coils Coil 972 1048 - -
Blo18g00260 1548 PANTHER MYOSIN 1154 1546 - -
Blo18g00260 1548 PANTHER MYOSIN 4 1128 - -
Blo18g00260 1548 ProSiteProfiles Dilute domain profile. 1200 1493 IPR002710 -
Blo18g00260 1548 PANTHER PROTEIN OPAQUE1-LIKE 4 1128 - -
Blo18g00260 1548 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Blo18g00260 1548 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Blo18g00260 1548 Coils Coil 864 908 - -
Blo18g00260 1548 CDD MYSc_Myo11 73 717 IPR036018 -
Blo18g00260 1548 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 Gene3D - 435 620 - -
Blo18g00260 1548 Gene3D Kinesin motor domain 62 659 IPR036961 -
Blo18g00260 1548 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 Pfam Myosin head (motor domain) 61 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 Pfam IQ calmodulin-binding motif 781 800 IPR000048 GO:0005515
Blo18g00260 1548 Pfam IQ calmodulin-binding motif 829 849 IPR000048 GO:0005515
Blo18g00260 1548 Pfam IQ calmodulin-binding motif 759 773 IPR000048 GO:0005515
Blo18g00260 1548 Gene3D - 829 879 - -
Blo18g00260 1548 Gene3D - 731 780 - -
Blo18g00260 1548 Gene3D - 781 828 - -
Blo18g00260 1548 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Blo18g00260 1548 CDD MyosinXI_CBD 1155 1516 IPR037975 GO:0007015
Blo18g00260 1548 Gene3D - 664 730 - -
Blo18g00260 1548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 780 878 IPR027417 -
Blo18g00260 1548 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Blo18g00260 1548 Coils Coil 948 968 - -
Blo18g00260 1548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 777 IPR027417 -
Blo18g00260 1548 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Blo18g00260 1548 PANTHER PROTEIN OPAQUE1-LIKE 1154 1546 - -
Blo18g00260 1548 SMART iq_5 754 776 IPR000048 GO:0005515
Blo18g00260 1548 SMART iq_5 827 849 IPR000048 GO:0005515
Blo18g00260 1548 SMART iq_5 802 824 IPR000048 GO:0005515
Blo18g00260 1548 SMART iq_5 731 753 IPR000048 GO:0005515
Blo18g00260 1548 SMART iq_5 850 872 IPR000048 GO:0005515
Blo18g00260 1548 SMART iq_5 779 801 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00272 Blo18g00260 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00320 Blo-Chr10:4843476 Blo18g00260 Blo-Chr18:2747475 0 dispersed
Blo11g00450 Blo-Chr11:3982426 Blo18g00260 Blo-Chr18:2747475 0 dispersed
Blo03g01423 Blo-Chr3:40799765 Blo18g00260 Blo-Chr18:2747475 0 transposed
Blo04g00005 Blo-Chr4:53343 Blo18g00260 Blo-Chr18:2747475 0 transposed
Blo04g00428 Blo-Chr4:3505954 Blo18g00260 Blo-Chr18:2747475 0 transposed
Blo17g00272 Blo-Chr17:2832739 Blo18g00260 Blo-Chr18:2747475 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00260 K10357 - zju:107420053 2446.77