Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00266 ATGGAAAGCAAGCTCTACGAATCAGCAGTGGAAGGAAACGTAGAAAAGCTTTTAGAATTGCTCAAACGAGACCATCTAATTCTAGATGGAGCAGCCATTAATAGCTTCTCTGAAACTCCCTTCCAGGTAGCCGCCATGGCTGGACACACAGAGATTGTCGATGAAGATGGAAGAAACCCTCTTCACCTCGCAGCCATGAAAGGAAGGATCGGTGTTTTGAAAGAGCTGCTCCGAGCAAGACAGGAGGCTGCTCGAGCCGGTGCGGACAAGGGTGGAACCATACTGCGTGCTTGCGTGAAGAACAAACAATTAGAGGCACTGAAGATTCTGGTGGAGGCTATAAATGATGACCAATTTATGAACAAGAAGGATGATTTTGGCTTCACCTTTCTCGACTTGGTAGTCTTGAACAAACAACTTGAGCTCACAAGACTACGGATGGAAACGAAAGCGCTGCCCTCAAATGAGATCACCGAATTGGACATTGTAAATCAAAGTCCTCGAGACCCTAAAGATCTGAATATTGCAGTAAATCTCCGAGCAGACGGAGCATCCAGACCCACAGCCAACTTCATTCCCCCGTCGGCCGGCAACCAGAGAAAAGACTCTCAAACTGCAGGGGCATTAAATTACACTTTACTGAATCGCAAACGTCAGAGGAAAAAAAAGCTAGCAAACAAAGAAAACGCAATAATGGTGGTCGCATCGTTGGTAGCAACCATGGCTTTTGCAGCCGGACTGACCCCTCCGGGCGGCCTTTGGCAGGACAACTCCAACAAAGACGAAACTGAACAACACGAGACCGGAAAATCAATACTTGCTTACAGTGATATAGACTTCTTTAGGATCGCCAATAGAGGGTCGAACAAGCTCCAACAACGAGAGAAGAAAAAAATGGAAAGCAAGCTCTACGAATCAGCAGTGGAAGGAAGTGTAGAAAAGCTTTTAGAATTGCTCAAACGAGACCATCTAATTCTTGATGGAGCAGCCATTAATAGCTTATCTGAAACTCCCTTGCACGTAGCCGCCATGGCTGGACACACAGAGATTGTCAAGGAGATGCTACGGAGAAAACCAGAGTTTGCTAAAGCACTTGATTCACGAAGTTGTTCCCCGCTTCACTTAGCTTCTGCAAAAGGGCATGTAGAAATTGTAAGAGAGTTGCTCAAAGTTGATTCCGATATGTGTTTTGCTCGCGATGAAGATGGAAGAAACCCTCTTCACCTCGCAGTTATGAAAGGGAGGATCGGTGTTTTGAAAGAGCTGCTCCGAGCAAGACCGGAGGCTGCTCTAGCCGGTGCGGAGCAGGGTGGAACCATACTGCATACTGTAAATTTTTTGCTCACAAGATTACGGATAGAAACGAATGCGTTGGCCTCAAATGAGATCACCCAATTGGACATTGTGAATCAAAGTCCTCGAGACCCTACATATCTGAATATTGCAGTGAATCTCCGAGCTGACGGAGCTTCCCGACCAACAGCCAATTTCATTCCCCCGTCGGCCGGCAAGCAGAAAAAAGACTCTCAAACTGCAGGGGCATTAAACTCCACTTTACTGAATCGCAAACGTGAGAGTAAAAAAAGGCTAGCAAACAAAAAAAACGCAATAATGGTGGTCGCATCGTTGGTAGCAACCATGGCTTTTGCAGCCGGACTAACCCCTCCGAGCGGCATTTGGCAAGACAACTCCAAGAATGACGAACTTGAACACCACGAGGCCGGAAAATCAATACTTGCTTACAGTGATCTAATCTACTCTTCAGTATATGGATTTTATGGGTATGTGTCTTTCAACACAATCGGATTAGTAGCTTCGTTAAGCGTAATAATGCTGCTAATCACTGGGCTGCCATTCAAGAGACAATTTTTCATGTGGGTTCTAACGATAATCATGTGGGTGGCCATATGTTCAATGGCTCTGACTTACATTATTGCCATTATAAGTAAGTATTACTCCGGAGAGCAAGATTCCCGTAGTGGGGCTGATACTTTCCATAGGGTTAATAATCTGGATTGTTGTAATGGGCTTTGTCGTTTTAGGACATACCATCTACTTCTTCATCATGATATGTCGGAAGTTACATCGGACTCTGCACAAAAAGACAGCAGTTTTTGTTCCTGA 2124 45.34 MESKLYESAVEGNVEKLLELLKRDHLILDGAAINSFSETPFQVAAMAGHTEIVDEDGRNPLHLAAMKGRIGVLKELLRARQEAARAGADKGGTILRACVKNKQLEALKILVEAINDDQFMNKKDDFGFTFLDLVVLNKQLELTRLRMETKALPSNEITELDIVNQSPRDPKDLNIAVNLRADGASRPTANFIPPSAGNQRKDSQTAGALNYTLLNRKRQRKKKLANKENAIMVVASLVATMAFAAGLTPPGGLWQDNSNKDETEQHETGKSILAYSDIDFFRIANRGSNKLQQREKKKMESKLYESAVEGSVEKLLELLKRDHLILDGAAINSLSETPLHVAAMAGHTEIVKEMLRRKPEFAKALDSRSCSPLHLASAKGHVEIVRELLKVDSDMCFARDEDGRNPLHLAVMKGRIGVLKELLRARPEAALAGAEQGGTILHTVNFLLTRLRIETNALASNEITQLDIVNQSPRDPTYLNIAVNLRADGASRPTANFIPPSAGKQKKDSQTAGALNSTLLNRKRESKKRLANKKNAIMVVASLVATMAFAAGLTPPSGIWQDNSKNDELEHHEAGKSILAYSDLIYSSVYGFYGYVSFNTIGLVASLSVIMLLITGLPFKRQFFMWVLTIIMWVAICSMALTYIIAIISKYYSGEQDSRSGADTFHRVNNLDCCNGLCRFRTYHLLLHHDMSEVTSDSAQKDSSFCS 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2831418 2837510 + BLOR08754 Blo18g00266 73570

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00266 707 ProSiteProfiles Ankyrin repeat region circular profile. 334 357 - -
Blo18g00266 707 PANTHER HOMEOBOX PROTEIN WARIAI 444 647 - -
Blo18g00266 707 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 444 647 - -
Blo18g00266 707 ProSiteProfiles Ankyrin repeat region circular profile. 368 395 - -
Blo18g00266 707 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 55 279 - -
Blo18g00266 707 ProSiteProfiles Ankyrin repeat profile. 56 78 IPR002110 GO:0005515
Blo18g00266 707 ProSiteProfiles Ankyrin repeat profile. 334 357 IPR002110 GO:0005515
Blo18g00266 707 Pfam Ankyrin repeats (3 copies) 324 392 IPR002110 GO:0005515
Blo18g00266 707 Pfam Ankyrin repeats (3 copies) 48 113 IPR002110 GO:0005515
Blo18g00266 707 Gene3D - 276 490 IPR036770 -
Blo18g00266 707 Gene3D - 1 212 IPR036770 -
Blo18g00266 707 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 305 442 - -
Blo18g00266 707 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 7 55 - -
Blo18g00266 707 MobiDBLite consensus disorder prediction 503 518 - -
Blo18g00266 707 MobiDBLite consensus disorder prediction 494 518 - -
Blo18g00266 707 Pfam Ankyrin repeat 402 424 IPR002110 GO:0005515
Blo18g00266 707 SUPERFAMILY Ankyrin repeat 5 148 IPR036770 -
Blo18g00266 707 PANTHER HOMEOBOX PROTEIN WARIAI 7 55 - -
Blo18g00266 707 ProSiteProfiles Ankyrin repeat profile. 402 434 IPR002110 GO:0005515
Blo18g00266 707 ProSiteProfiles Ankyrin repeat region circular profile. 402 424 - -
Blo18g00266 707 ProSiteProfiles Ankyrin repeat region circular profile. 56 78 - -
Blo18g00266 707 SUPERFAMILY Ankyrin repeat 303 446 IPR036770 -
Blo18g00266 707 PANTHER HOMEOBOX PROTEIN WARIAI 55 279 - -
Blo18g00266 707 PANTHER HOMEOBOX PROTEIN WARIAI 305 442 - -
Blo18g00266 707 Pfam Domain of unknown function 528 648 IPR026961 -
Blo18g00266 707 Pfam Domain of unknown function 222 281 IPR026961 -
Blo18g00266 707 SMART ANK_2a 90 120 IPR002110 GO:0005515
Blo18g00266 707 SMART ANK_2a 368 397 IPR002110 GO:0005515
Blo18g00266 707 SMART ANK_2a 56 85 IPR002110 GO:0005515
Blo18g00266 707 SMART ANK_2a 126 155 IPR002110 GO:0005515
Blo18g00266 707 SMART ANK_2a 334 363 IPR002110 GO:0005515
Blo18g00266 707 SMART ANK_2a 402 431 IPR002110 GO:0005515
Blo18g00266 707 ProSiteProfiles Ankyrin repeat profile. 368 400 IPR002110 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00266 - - - vri:117912687 306.605
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00277 Blo-Chr17:2922355 Blo18g00266 Blo-Chr18:2831418 6.48E-46 dispersed
Blo18g00266 Blo-Chr18:2831418 Blo18g00268 Blo-Chr18:2858190 1.86E-142 dispersed
Blo18g00265 Blo-Chr18:2824144 Blo18g00266 Blo-Chr18:2831418 1.44E-149 tandem
Blo18g00266 Blo-Chr18:2831418 Blo18g00267 Blo-Chr18:2840441 1.05E-137 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g137 . . . . . . . . . . . . . . Sed08g1788 . . Bhi04g01497 Tan02g1599 Cmetu03g0638 . Hepe08g1418 . Lcy13g2206 . . . . . . . . . . . . . . . . Blo18g00266 . . . . . Bma02g00544 . . . . . . . . . . . . . . . . . . . . . . . Lsi08g00846 . Chy03g00665 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002621 0 1 10 2 1 1 1 1 1 1 1 1 1 3 1 2 1 0 1 1 1 1 3 6 4 4 2 1 3 2 58
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00266 Blo_Chr18 FPKM 1.759269 1.808755 4.729646 5.139473 9.364004 8.510612 9.15016 5.769563 5.137214 5.682434