Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00273 ATGGATATCACAAGGCTTAAGCTGATGACAGACACAGCAGGATTACTATCTGATTCTATGACTAATACCTCCTCTGAGCTAGTCGAAAGAACTGATGAGGATTGTATCAGTAGTGATTTGGAGAATGAAGCGATGATGGAGATAGTTGAAGAAGAGAGAAGAGCATTTCCTTTATTGGGTATGAGATCTCAAAATACGAGCAACTGGGTGGCTGCAGGCGAGGTAGTAGTCCAGGAAAGCGAGGAAGATGAATCATTATCATTGGAGGGGGATCACAATCTCGACAGCTCTTGTTCTCTCTCAGTTGTGAGTGAAAATAGTAGCATATGTGGAGACGATTTCTTTGATTTTCAGGCATCTTACGATGTTGAAACAAGTAGTTCTGTAGACATAGAGAAGAGGACTTGCGATGTTGATGATCTCGCAAAAGGTGACAATTTAGGTGGTTCGGCTATCAGAAAAGAAATGGGGAGTGATCCTCTTTCTGCTGCAGTGAACCTCGAGGAAGATATTCAAAATGTTCTTGAACCCGATGCTTCTAAATTGGTTTTTCGATTACCTCTAGTCGAAAAAGGAAGTAGTGGAATAGTAAGCCGTAGTGTTTTTGAAGTGGATTATGTTCCCCTTTGGGGGTCTACATCGAAGTGTGGAAGAAGACCCGAAATGGAAGATGCCTTGGCTACAATTCCTCGGTTCTTTGAAGTTCCTATTCAGATGCTTGCCGATGACTGGGCTGTCGATGGTCCAAAAAAGAACATATCTCATCAAACCGTTCATTTTCTTGGAGTCTATGATGGCCATGGTGGTTTCCAAGTTGCTAACTACTGTCGGGAGCGTCTTCATTTGGCTTTAGCTGAGGAGATTGAATTTTTCAAGGAAGGTTTATTAGCTGGAAGCATTACTGATAATTGCCAAGAGCAGTGGAAAAGAGCATTTACCAATTGTTTTCTCAAGGTTGACGCCGAAGTTGGAGGAAAATCTAGAACCGAGCCTGTTGCCTCAGAAACTGTCGGTTCAACTGCTGTCACTGCGATAATTTGTGCGTCTCATATTATAGTAGCTAATTGTGGGGATTCAAGAGCTGTGCTGTGTCGTGGGAAGGAGCCGATGGCCTTGTCAGTAGATCATAAACCTAATAGAGAAGATGAATATGCAAGAATCGAGGCTGCCGGAGGAAAGGTCATTCAATGGAATGGGCATCGTGTTTTTGGTGTCCTTGCAATGTCAAGGTCTATTGGCGACAGATACTTGAAACCGTGGATCATTCTGGAGCTCGAAGTGACGTTTCTTCCTCGAGCTCGAGACGATGAATGTCTAATTCTCGCGAGTGATGGTTTGTGGGACGTAATGTCCAACGAAGAGGCATGTGACTTGGCTCGGAGACGAATTCTCCTCTGGCACAAAAAGAACGCCTCCCTTAATCTAACCCACGAAAGGGACGGAGGAATCGACCCTGCAGCCCAAGCGGCAGCCGAGTATCTATGCAACCGAGCTCTTCAGAAGGGTAGTAAAGACAACATTACTGTGATCGTAGTGGACTTGAAAGCTCAGAGGAAGTTCAAGACAAAAACATGA 1575 44.32 MDITRLKLMTDTAGLLSDSMTNTSSELVERTDEDCISSDLENEAMMEIVEEERRAFPLLGMRSQNTSNWVAAGEVVVQESEEDESLSLEGDHNLDSSCSLSVVSENSSICGDDFFDFQASYDVETSSSVDIEKRTCDVDDLAKGDNLGGSAIRKEMGSDPLSAAVNLEEDIQNVLEPDASKLVFRLPLVEKGSSGIVSRSVFEVDYVPLWGSTSKCGRRPEMEDALATIPRFFEVPIQMLADDWAVDGPKKNISHQTVHFLGVYDGHGGFQVANYCRERLHLALAEEIEFFKEGLLAGSITDNCQEQWKRAFTNCFLKVDAEVGGKSRTEPVASETVGSTAVTAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIILELEVTFLPRARDDECLILASDGLWDVMSNEEACDLARRRILLWHKKNASLNLTHERDGGIDPAAQAAAEYLCNRALQKGSKDNITVIVVDLKAQRKFKTKT 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2890480 2892736 + BLOR08761 Blo18g00273 73577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00273 524 Gene3D - 195 524 IPR036457 -
Blo18g00273 524 SUPERFAMILY PP2C-like 202 515 IPR036457 -
Blo18g00273 524 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 96 524 - -
Blo18g00273 524 ProSitePatterns PPM-type phosphatase domain signature. 260 268 IPR000222 GO:0043169
Blo18g00273 524 CDD PP2Cc 211 514 IPR001932 -
Blo18g00273 524 Pfam Protein phosphatase 2C 252 507 IPR001932 -
Blo18g00273 524 ProSiteProfiles PPM-type phosphatase domain profile. 209 514 IPR001932 -
Blo18g00273 524 PANTHER ALPHABET, ISOFORM E-RELATED 96 524 - -
Blo18g00273 524 SMART PP2C_4 197 512 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00743 Blo-Chr6:30639831 Blo18g00273 Blo-Chr18:2890480 8.17E-154 dispersed
Blo08g00318 Blo-Chr8:4623836 Blo18g00273 Blo-Chr18:2890480 8.60E-69 dispersed
Blo14g00107 Blo-Chr14:745207 Blo18g00273 Blo-Chr18:2890480 8.51E-80 dispersed
Blo17g00280 Blo-Chr17:2952936 Blo18g00273 Blo-Chr18:2890480 0 dispersed
Blo18g00273 Blo-Chr18:2890480 Blo13g00881 Blo-Chr13:31347934 7.22E-74 dispersed
Blo18g00271 Blo-Chr18:2877399 Blo18g00273 Blo-Chr18:2890480 7.55E-72 proximal
Blo18g00273 Blo-Chr18:2890480 Blo18g00274 Blo-Chr18:2893165 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00273 K14497 - zju:107435535 703.745