Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00274 ATGTCTACGGCGGTTGCAGTGCCATTTAGAGTAGGTAACCAAGTCTTTGATAATCCAAATCTAGCTACACACATGGATATCACAAGGCTTAAGCTGATGACAGACACAGCAGGATTACTATCTGATTCTATGACTAATACCTCCTCTGAGCTAGTCGAAAGAACTGATGAGGATTGTATCAGTAGTGATTTGGAGAATGAAGCGATGATGGAGATAGTTGAAGAAGAGAGAAGAGCATTTCCTTTATTGGGTATGAGATCTCAAAATACGAGCAACTGGGTGGCTGCAGGCGAGGTAGTAGTCCAGGAAAGCGAGGAAGATGAATCATTATCATTGGAGGGGGATCACAATCTCGACAGCTCTTGTTCTCTCTCAGTTGTGAGTGAAAATAGTAGCATATGTGGAGACGATTTCTTTGATTTTCAGGCATCTTACGATGTTGAAACAAGTAGTTCTGTAGACATAGAGAAGAGGACTTGCGATGTTGATGATCTCGCAAAAGGTGACAATTTAGGTGGTTCGGCTATCAGAAAAGAAATGGGGAGTGATCCTCTTTCTGCTGCAGTGAACCTCGAGGAAGATATTCAAAATGTTCTTGAACCCGATGCTTCTAAATTGGTTTTTCGATTACCTCTAGTCGAAAAAGGAAGTAGTGGAATAGTAAGCCGTAGTGTTTTTGAAGTGGATTATGTTCCCCTTTGGGGGTCTACATCGAAGTGTGGAAGAAGACCCGAAATGGAAGATGCCTTGGCTACAATTCCTCGGTTCTTTGAAGTTCCTATTCAGATGCTTGCCGATGACTGGGCTGTCGATGGTCCAAAAAAGAACATATCTCATCAAACCGTTCATTTTCTTGGAGTCTATGATGGCCATGGTGGTTTCCAAGTTGCTAACTACTGTCGGGAGCGTCTTCATTTGGCTTTAGCTGAGGAGATTGAATTTTTCAAGGAAGGTTTATTAGCTGGAAGCATTACTGATAATTGCCAAGAGCAGTGGACAAGAGCATTTACCAATTGTTTTCTCAAGGTTGACGCCGAAGTTGGAGGAAAATCTAGAACCGAGCCTGTTGCCTCAGAAACTGTCGGTTCAACTGCTGTCACTGCGATAATTTGTGCGTCTCATATTATAGTAGCTAATTGTGGGGATTCAAGAGCTGTGCTGTGTCGTGGGAAGGAGCCGATGGGCTTGTTAGTAGATCATAAAGTGGAATACCAAGTGCAGATTAGAAAAAATACTTCTTTTAGATTAGCACAAGGCGATGTTGACGAAGCAGAAGAGGAACTCTTTCTTTTCTCTCTCTCTATTCCCATCGTCGGTGAAGTCGCAGAGGCTATCCCTCCTACCTCTCCGGCGTATCCAAAATCTTACCAGAAACCCGCCATTTGA 1386 43.15 MSTAVAVPFRVGNQVFDNPNLATHMDITRLKLMTDTAGLLSDSMTNTSSELVERTDEDCISSDLENEAMMEIVEEERRAFPLLGMRSQNTSNWVAAGEVVVQESEEDESLSLEGDHNLDSSCSLSVVSENSSICGDDFFDFQASYDVETSSSVDIEKRTCDVDDLAKGDNLGGSAIRKEMGSDPLSAAVNLEEDIQNVLEPDASKLVFRLPLVEKGSSGIVSRSVFEVDYVPLWGSTSKCGRRPEMEDALATIPRFFEVPIQMLADDWAVDGPKKNISHQTVHFLGVYDGHGGFQVANYCRERLHLALAEEIEFFKEGLLAGSITDNCQEQWTRAFTNCFLKVDAEVGGKSRTEPVASETVGSTAVTAIICASHIIVANCGDSRAVLCRGKEPMGLLVDHKVEYQVQIRKNTSFRLAQGDVDEAEEELFLFSLSIPIVGEVAEAIPPTSPAYPKSYQKPAI 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2893165 2894769 - BLOR08762 Blo18g00274 73578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00274 461 ProSitePatterns PPM-type phosphatase domain signature. 284 292 IPR000222 GO:0043169
Blo18g00274 461 PANTHER ALPHABET, ISOFORM E-RELATED 99 402 - -
Blo18g00274 461 SMART PP2C_4 221 438 IPR001932 -
Blo18g00274 461 SUPERFAMILY PP2C-like 226 406 IPR036457 -
Blo18g00274 461 ProSiteProfiles PPM-type phosphatase domain profile. 233 461 IPR001932 -
Blo18g00274 461 Gene3D - 219 427 IPR036457 -
Blo18g00274 461 CDD PP2Cc 235 403 IPR001932 -
Blo18g00274 461 Pfam Protein phosphatase 2C 276 403 IPR001932 -
Blo18g00274 461 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 99 402 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00280 Blo18g00274 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00274 Blo-Chr18:2893165 Blo06g00743 Blo-Chr6:30639831 5.55E-70 dispersed
Blo18g00273 Blo-Chr18:2890480 Blo18g00274 Blo-Chr18:2893165 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00274 K14497 - zju:107435535 479.559