Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00281 ATGCCGATAAGAAAGCCTCCATGTTTGCTACCCCAACCTGTGATAGTTCCTCACCATTCCCCTGCATCTCTTACGGAGCTAGACGCCGCTGCAACTACTCTTCAGAAATGCTACAAAAGCTACCGTACACGACGAAACCTTGCAGATTGTGCAGTGGTTGTTGAAGAGCTATGGTGGAAAGCCCTAGACTCTGCAGCTCTGAAACGAAGCTCAGTTTCGTTCTTTAACATGGAGAAAACGGAAACTGCCGTGTCCAAATGGTCAAGAGCCAGAACAAGGGCCGCCAAAGTTGGGAAGGGTTTATCAAAGGACAGGAATGCTCAAAAATTAGCTCTGCAACACTGGCTTGAAGCGATTGATCCACGCCATAGATATGGACACAATTTACATTTCTACTATGATGACTGGTCTGCCAGCAGAAGCACCCAGCCTTTCTTTTATTGGTTGGACGTTGGTGATGGTAAAGATGTAAATCTAGAGATGTGCTGCAGAGCTGTTCTACATCAGCAATGCATCAAATATCTCGGACCAAGGGAGAGGGAAGAATATGAAGTGATTGTAGAAAGTGGAAAGCTGGTTTACATGCAGAGTGGAATACTAGTAAACACAGAGGAAGATTCCAAGTGGATTTTTGTACTCAGCACATCTAGAGCTCTTTACGTGGGGAAGAAGAAGAAGGGTCGTTTTCAGCACTCAAGCTTTCTGTCTGGAGGAGCAACAACAGCGGCTGGAAGATTGATCGTCCATGGCGGCGTACTTGAGGTGGCCATTTGGCCCTACAGTGGCCACTATCTTCCAACAGAAGACAATTTTAAGGAATTAATCAGCTTCCTTGAGGAAAAGGGCGTAGGATTAACCAATGTTAAGAGATACGGCGTAGACGATGAGAGCTCCTCAGGTGGCAGCGAAGAGATGAAACCAGAGGAAGCAAACGCCGGCGATGCTAATGGGCAGATAGACATCAAACTGTTGCTTTCTAATCAGAAGGAAGAAGACATGATTATGAACAGTGATTCAGCCATCGAAGAAGACGAGTCTCATATTCTTGATACGCCGAGGCGGTTGTCGTGCAAGTGGACGAGCGGAGTCGGGGCGCGCATAGGGTGCGTGAAAGAGTACCCAACGGAGCTGCAGTGGCGCGCGCTGGAGCAAGTGAATTTGTCACCTAAGCCCACACCTCGACGCTGCCTTCCTATTCCTTCACCGCGGCCAAGCCCATTCATTAAGGAAAAAATGGGCAAGAAATGGAAGCTGTGGAGTTGGAAGGGCCTCGAAACAAGTCATACAACTGCTCCTGGACGCTGTGAGTCGGCTGATATTGCTCCATTTACGGCTGCAGTTGCGACGCTGGTTCGAGCTCCTCCTCAAGGTTTCAGGGTCGTCAGGCAAGAATGGGCTGCAACTCGTATCCAAACAGCTTTCCGCGCCTTCTTGGCAAGAAGGGCCCTTAGAGCTTTAAAAGGAGTGGTGAGGATTCAAGCTCTAGTCCGGGGCCGACAGGTGAGGAAGCAGGCGGCTGTAATGCTAAGGTGCATGCAGGCTCTAGTCCGGGTTCAGGCTCGCGTCCGCGCCGGTCGTGCTCGAAGATCCTCCGAGGGACAAGCCGTACAGCACATACTAGATCAACACAGAAGGAAGACAGATCGTCTGAGACGAGCCGAGGAAGGGTGGTGTGGTGGGAACGGAACATCGGAGGATGCTAAAGCAAATATACAAATGAGGCAAGAGGGTGCCATCAGAAGAGATAGAGCAGTCGCATATGCACTAACCCAGAAGCAAATGAATTCAAAATCCCGATCGAACTGTTCGAATTCTCCAAGCAACGAGCCCGAATTCGACCGGAACGATCCGGGTTGGAGTTGGGTAGAGCGTTGGATGGTTGCTAAGTCATGGGAGACGAGGCCGATAGCCAATCCGCCTCTGATGAGATATGTACCCTCTGCCCTCAAAACAGATCCAGAACCTTGCTCAGTGAGTGAGTGGAAAAACAATGTCAAGACTAGAATTTCAGCAAAACCTCCTCAAATTGGAAAGTTTTGTCTTCCGTCGTCTTCTTCGCTTCCGAGTTCTGAATTTTTTCCGGGTGGAAGCAGATCGACGACTCCCTCATCCGTCGAGATCGAGAGAGAGAGAGTCAGGATCAGCCAAATTACATGA 2157 49.51 MPIRKPPCLLPQPVIVPHHSPASLTELDAAATTLQKCYKSYRTRRNLADCAVVVEELWWKALDSAALKRSSVSFFNMEKTETAVSKWSRARTRAAKVGKGLSKDRNAQKLALQHWLEAIDPRHRYGHNLHFYYDDWSASRSTQPFFYWLDVGDGKDVNLEMCCRAVLHQQCIKYLGPREREEYEVIVESGKLVYMQSGILVNTEEDSKWIFVLSTSRALYVGKKKKGRFQHSSFLSGGATTAAGRLIVHGGVLEVAIWPYSGHYLPTEDNFKELISFLEEKGVGLTNVKRYGVDDESSSGGSEEMKPEEANAGDANGQIDIKLLLSNQKEEDMIMNSDSAIEEDESHILDTPRRLSCKWTSGVGARIGCVKEYPTELQWRALEQVNLSPKPTPRRCLPIPSPRPSPFIKEKMGKKWKLWSWKGLETSHTTAPGRCESADIAPFTAAVATLVRAPPQGFRVVRQEWAATRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVMLRCMQALVRVQARVRAGRARRSSEGQAVQHILDQHRRKTDRLRRAEEGWCGGNGTSEDAKANIQMRQEGAIRRDRAVAYALTQKQMNSKSRSNCSNSPSNEPEFDRNDPGWSWVERWMVAKSWETRPIANPPLMRYVPSALKTDPEPCSVSEWKNNVKTRISAKPPQIGKFCLPSSSSLPSSEFFPGGSRSTTPSSVEIERERVRISQIT 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2953121 2958047 + BLOR08769 Blo18g00281 73585

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00281 718 MobiDBLite consensus disorder prediction 296 310 - -
Blo18g00281 718 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 10 409 IPR044159 -
Blo18g00281 718 ProSiteProfiles IQ motif profile. 487 514 IPR000048 GO:0005515
Blo18g00281 718 Pfam IQ calmodulin-binding motif 465 484 IPR000048 GO:0005515
Blo18g00281 718 Pfam IQ calmodulin-binding motif 29 46 IPR000048 GO:0005515
Blo18g00281 718 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM5 10 409 - -
Blo18g00281 718 MobiDBLite consensus disorder prediction 293 313 - -
Blo18g00281 718 SMART iq_5 485 506 IPR000048 GO:0005515
Blo18g00281 718 SMART iq_5 462 484 IPR000048 GO:0005515
Blo18g00281 718 SMART iq_5 26 48 IPR000048 GO:0005515
Blo18g00281 718 ProSiteProfiles IQ motif profile. 463 491 IPR000048 GO:0005515
Blo18g00281 718 MobiDBLite consensus disorder prediction 591 611 - -
Blo18g00281 718 MobiDBLite consensus disorder prediction 591 616 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00281 - - - cit:102619101 566.229
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01460 Blo-Chr1:53769300 Blo18g00281 Blo-Chr18:2953121 4.75E-87 dispersed
Blo03g01027 Blo-Chr3:36556078 Blo18g00281 Blo-Chr18:2953121 1.13E-45 dispersed
Blo08g00348 Blo-Chr8:5404354 Blo18g00281 Blo-Chr18:2953121 5.37E-180 dispersed
Blo12g00496 Blo-Chr12:22748017 Blo18g00281 Blo-Chr18:2953121 1.50E-121 dispersed
Blo12g01017 Blo-Chr12:28111644 Blo18g00281 Blo-Chr18:2953121 5.71E-86 dispersed
Blo14g00556 Blo-Chr14:8317568 Blo18g00281 Blo-Chr18:2953121 0 dispersed
Blo16g00006 Blo-Chr16:433825 Blo18g00281 Blo-Chr18:2953121 1.11E-27 dispersed
Blo18g00281 Blo-Chr18:2953121 Blo17g00284 Blo-Chr17:3011091 0 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo13g00730 CCT,ECH 65 305 IQD Protein Family AT3G09710 50.8 6.9e-56 215.3
Blo09g00550 BCT 1 468 IQD Protein Family AT5G03040 50.3 7.4e-103 371.3
Blo13g00730 CCT,ECH 1 466 IQD Protein Family AT3G52290 51.1 1.1e-95 347.4
Blo03g01027 . 10 361 IQD Protein Family AT3G22190 57.0 4.0e-79 292.4
Blo01g01460 BCT 1 439 IQD Protein Family AT2G26180 60.9 4.6e-120 428.3
Blo12g01017 BCT 1 431 IQD Protein Family AT2G26180 60.9 1.8e-119 426.4
Blo18g00281 . 414 674 IQD Protein Family AT2G26180 56.3 6.8e-63 238.4
Blo03g01027 . 41 212 IQD Protein Family AT2G26180 61.7 1.1e-41 167.9
Blo16g00006 . 1 274 IQD Protein Family AT2G33990 52.5 5.6e-63 238.0
Blo07g00960 . 83 287 IQD Protein Family AT3G15050 54.1 3.6e-54 208.8
Blo02g00186 . 1 502 IQD Protein Family AT4G00820 50.4 1.5e-110 397.1
Blo05g00074 BCT,CCT,ECH 1 378 IQD Protein Family AT3G16490 50.9 1.0e-68 257.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000727 1 3 3 2 1 3 4 3 3 4 3 3 4 3 4 5 3 3 4 3 3 3 3 3 4 3 3 4 4 4 96
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00281 Blo_Chr18 FPKM 22.228165 26.014957 45.516235 46.979282 38.280807 40.632755 40.821125 46.841911 42.902924 44.737209