Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00281 ATGCCGATAAGAAAGCCTCCATGTTTGCTACCCCAACCTGTGATAGTTCCTCACCATTCCCCTGCATCTCTTACGGAGCTAGACGCCGCTGCAACTACTCTTCAGAAATGCTACAAAAGCTACCGTACACGACGAAACCTTGCAGATTGTGCAGTGGTTGTTGAAGAGCTATGGTGGAAAGCCCTAGACTCTGCAGCTCTGAAACGAAGCTCAGTTTCGTTCTTTAACATGGAGAAAACGGAAACTGCCGTGTCCAAATGGTCAAGAGCCAGAACAAGGGCCGCCAAAGTTGGGAAGGGTTTATCAAAGGACAGGAATGCTCAAAAATTAGCTCTGCAACACTGGCTTGAAGCGATTGATCCACGCCATAGATATGGACACAATTTACATTTCTACTATGATGACTGGTCTGCCAGCAGAAGCACCCAGCCTTTCTTTTATTGGTTGGACGTTGGTGATGGTAAAGATGTAAATCTAGAGATGTGCTGCAGAGCTGTTCTACATCAGCAATGCATCAAATATCTCGGACCAAGGGAGAGGGAAGAATATGAAGTGATTGTAGAAAGTGGAAAGCTGGTTTACATGCAGAGTGGAATACTAGTAAACACAGAGGAAGATTCCAAGTGGATTTTTGTACTCAGCACATCTAGAGCTCTTTACGTGGGGAAGAAGAAGAAGGGTCGTTTTCAGCACTCAAGCTTTCTGTCTGGAGGAGCAACAACAGCGGCTGGAAGATTGATCGTCCATGGCGGCGTACTTGAGGTGGCCATTTGGCCCTACAGTGGCCACTATCTTCCAACAGAAGACAATTTTAAGGAATTAATCAGCTTCCTTGAGGAAAAGGGCGTAGGATTAACCAATGTTAAGAGATACGGCGTAGACGATGAGAGCTCCTCAGGTGGCAGCGAAGAGATGAAACCAGAGGAAGCAAACGCCGGCGATGCTAATGGGCAGATAGACATCAAACTGTTGCTTTCTAATCAGAAGGAAGAAGACATGATTATGAACAGTGATTCAGCCATCGAAGAAGACGAGTCTCATATTCTTGATACGCCGAGGCGGTTGTCGTGCAAGTGGACGAGCGGAGTCGGGGCGCGCATAGGGTGCGTGAAAGAGTACCCAACGGAGCTGCAGTGGCGCGCGCTGGAGCAAGTGAATTTGTCACCTAAGCCCACACCTCGACGCTGCCTTCCTATTCCTTCACCGCGGCCAAGCCCATTCATTAAGGAAAAAATGGGCAAGAAATGGAAGCTGTGGAGTTGGAAGGGCCTCGAAACAAGTCATACAACTGCTCCTGGACGCTGTGAGTCGGCTGATATTGCTCCATTTACGGCTGCAGTTGCGACGCTGGTTCGAGCTCCTCCTCAAGGTTTCAGGGTCGTCAGGCAAGAATGGGCTGCAACTCGTATCCAAACAGCTTTCCGCGCCTTCTTGGCAAGAAGGGCCCTTAGAGCTTTAAAAGGAGTGGTGAGGATTCAAGCTCTAGTCCGGGGCCGACAGGTGAGGAAGCAGGCGGCTGTAATGCTAAGGTGCATGCAGGCTCTAGTCCGGGTTCAGGCTCGCGTCCGCGCCGGTCGTGCTCGAAGATCCTCCGAGGGACAAGCCGTACAGCACATACTAGATCAACACAGAAGGAAGACAGATCGTCTGAGACGAGCCGAGGAAGGGTGGTGTGGTGGGAACGGAACATCGGAGGATGCTAAAGCAAATATACAAATGAGGCAAGAGGGTGCCATCAGAAGAGATAGAGCAGTCGCATATGCACTAACCCAGAAGCAAATGAATTCAAAATCCCGATCGAACTGTTCGAATTCTCCAAGCAACGAGCCCGAATTCGACCGGAACGATCCGGGTTGGAGTTGGGTAGAGCGTTGGATGGTTGCTAAGTCATGGGAGACGAGGCCGATAGCCAATCCGCCTCTGATGAGATATGTACCCTCTGCCCTCAAAACAGATCCAGAACCTTGCTCAGTGAGTGAGTGGAAAAACAATGTCAAGACTAGAATTTCAGCAAAACCTCCTCAAATTGGAAAGTTTTGTCTTCCGTCGTCTTCTTCGCTTCCGAGTTCTGAATTTTTTCCGGGTGGAAGCAGATCGACGACTCCCTCATCCGTCGAGATCGAGAGAGAGAGAGTCAGGATCAGCCAAATTACATGA 2157 49.51 MPIRKPPCLLPQPVIVPHHSPASLTELDAAATTLQKCYKSYRTRRNLADCAVVVEELWWKALDSAALKRSSVSFFNMEKTETAVSKWSRARTRAAKVGKGLSKDRNAQKLALQHWLEAIDPRHRYGHNLHFYYDDWSASRSTQPFFYWLDVGDGKDVNLEMCCRAVLHQQCIKYLGPREREEYEVIVESGKLVYMQSGILVNTEEDSKWIFVLSTSRALYVGKKKKGRFQHSSFLSGGATTAAGRLIVHGGVLEVAIWPYSGHYLPTEDNFKELISFLEEKGVGLTNVKRYGVDDESSSGGSEEMKPEEANAGDANGQIDIKLLLSNQKEEDMIMNSDSAIEEDESHILDTPRRLSCKWTSGVGARIGCVKEYPTELQWRALEQVNLSPKPTPRRCLPIPSPRPSPFIKEKMGKKWKLWSWKGLETSHTTAPGRCESADIAPFTAAVATLVRAPPQGFRVVRQEWAATRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVMLRCMQALVRVQARVRAGRARRSSEGQAVQHILDQHRRKTDRLRRAEEGWCGGNGTSEDAKANIQMRQEGAIRRDRAVAYALTQKQMNSKSRSNCSNSPSNEPEFDRNDPGWSWVERWMVAKSWETRPIANPPLMRYVPSALKTDPEPCSVSEWKNNVKTRISAKPPQIGKFCLPSSSSLPSSEFFPGGSRSTTPSSVEIERERVRISQIT 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2953121 2958047 + BLOR08769 Blo18g00281 73585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00281 718 MobiDBLite consensus disorder prediction 296 310 - -
Blo18g00281 718 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 10 409 IPR044159 -
Blo18g00281 718 ProSiteProfiles IQ motif profile. 487 514 IPR000048 GO:0005515
Blo18g00281 718 Pfam IQ calmodulin-binding motif 465 484 IPR000048 GO:0005515
Blo18g00281 718 Pfam IQ calmodulin-binding motif 29 46 IPR000048 GO:0005515
Blo18g00281 718 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM5 10 409 - -
Blo18g00281 718 MobiDBLite consensus disorder prediction 293 313 - -
Blo18g00281 718 SMART iq_5 485 506 IPR000048 GO:0005515
Blo18g00281 718 SMART iq_5 462 484 IPR000048 GO:0005515
Blo18g00281 718 SMART iq_5 26 48 IPR000048 GO:0005515
Blo18g00281 718 ProSiteProfiles IQ motif profile. 463 491 IPR000048 GO:0005515
Blo18g00281 718 MobiDBLite consensus disorder prediction 591 611 - -
Blo18g00281 718 MobiDBLite consensus disorder prediction 591 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01460 Blo-Chr1:53769300 Blo18g00281 Blo-Chr18:2953121 4.75E-87 dispersed
Blo03g01027 Blo-Chr3:36556078 Blo18g00281 Blo-Chr18:2953121 1.13E-45 dispersed
Blo08g00348 Blo-Chr8:5404354 Blo18g00281 Blo-Chr18:2953121 5.37E-180 dispersed
Blo12g00496 Blo-Chr12:22748017 Blo18g00281 Blo-Chr18:2953121 1.50E-121 dispersed
Blo12g01017 Blo-Chr12:28111644 Blo18g00281 Blo-Chr18:2953121 5.71E-86 dispersed
Blo14g00556 Blo-Chr14:8317568 Blo18g00281 Blo-Chr18:2953121 0 dispersed
Blo16g00006 Blo-Chr16:433825 Blo18g00281 Blo-Chr18:2953121 1.11E-27 dispersed
Blo18g00281 Blo-Chr18:2953121 Blo17g00284 Blo-Chr17:3011091 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00281 - - cit:102619101 566.229