Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00284 ATGACTACCTCCACTTGTGGAGGCTCAGGCTTGGAACTCTGCCGAGATGACTCGGCTGCTTTCACTCTCAAGTTCATAGCCATGGCTTCCATCCTCATTGCCGGAGTTTCCGGGATAGCCATTCCTCTCGTCGGAAGACACCGAAGTTTCCTTAAGGCAGACAGTAATCTCTTTGTCTCTGCGAAAGCCTTTGCTGCTGGCGTGATCCTCGCAACTGGATTTGTCCACATGCTCTCTGGTGGGTCGAAGGCTCTGTCCAACCCCTGTTTGCCCACATTTCCTTGGTCCAAGTTTCCATTTTCTGGCTTCTTTGCCATGATTGCAGCTCTTGTGACCCTTCTGGTCGATTTTGTCGGGACTCAGTATTACGAGAGAAAGCAGGGGTTGAATCGATCATACGAGGAGCAGACTCAAGGGAACTTGAGAATGCAACGTTCTCATGATCATGATCATGATCATGGACATGGACACGGTCATGATCATGGACATGGACATTCTCATGGGATTCGAAACAGTGAAGAGGAGAGCAATCTTCGACATGTCGTGGTTTCTCAGATTTTGGAGCTTGGGATTGTATCGCATTCCGTGATCATCGGCCTATCTCTCGGAGTTTCTCAAAGTCCATGCACCATAAGACCGTTAATAGCAGCACTATCCTTCCACCAGTTTTTCGAAGGATTTGCGCTTGGAGGATGCATCTCCCAAGCGCAATTCAACCCCAAATCAGCCACGATCATGGCTTGCTTTTTTGCCATCACAACTCCGATTGGGATCGGGGCCGGGACCACCGTGGCATCGTTCTACAATCCTCTGAGCGTGGGAGCTTTGGTTGCAGAAGGGATATTGGACTCTCTTTCTGCTGGGATTCTGGTTTACATGGCCTTAGTGGATCTCATTGCAGCTGACTTTCTGATGCCCAGGGATTCCGGCGGTGATAGAGCGGCGGCCTCCGGCCGACCTTACTTTCCCACCGCCACTTTCGATTTTGTTTGGAAAGAAGAGCTTTCTTCTCTTTTCGGGTTCTTCATGGAGCGTGCGAGGCGGCTGGTGAACCGGGCGACTCTGAAGCGCCTGGTTTCGGGGTCGAGGCAGTACCGTCTGAATGAGCAACCGTCGTTTAACTATTCGTCTTCTATGCCGTATTCGAGCTCTAGGTACGTCTCCTCGCTCGTTCCTTATCTTCTCATGGCCAGAGGTCGCAGATCAGATTCGTCGATAGGAAGAAATTCGGCGAGCAATGTCAGCACCGGTTTGGGGTCGCAATCTCGGTCGATTTCCGTCGAAGCGTTGAAATCCAGCGACACTTTTCCACGACGACATAACTCCGCAACTCCAGAAGAACAAACGAACATGGCGGCTGTGTGTGGATTCGACAGTCTCGATTCGCTCATCGACGCCACCGTGCCCAAATCAATTCGACTGGAATCGATGAAGTTTTCCAAAATCATCGGAGTTAGCGTCGATTCTTCGGGTAAGCCCGCTTTACGGATGGCGATGCAGACTAGGGAGCAGCATATTAGGAGGGACAAGGCCACTAGCAACATTTGCACTGCTCAAGCTTTACTTGCAAACATGGCTGCTATGTATGCTGTTTATCACGGACCGAGTGGACTTAAAACCATCGCCCATCGAGTTCACGGCCTCGCCGGAGCATTTTCTCTTGGCCTGAAGAAACTCGGAACTGTGGAAGTTCAGGGCCTTCCCTTCTTCGACACGGTGAAGGTCAAGTGTGATGATGCTTATGCACTGGCCGATGCTGCTAGGACGAGTGAGATTAATCTCCGAATCGTAGACAAAAACACTATCACTGTTGCATTCGACGAAACGACGACATTAGACGACATCGATGCTCTCTTCAAAGTTTTCGCCGGCAAAAAGCCTGTTCCGTTTACAGCTGCATCTCTTGCACCGGACGTTCAAAGTGTAGTTCCTCCCGGGCTAGCTCGGGAGAGCCCGTTCCTAACGCACCCGATCTTTAACACGTACCACACAGAGCATGAATTACTAAGATATATACATCGATTACAGTCGAAAGATCTCTCGCTCTGTCACAGCATGATTCCGTTGGGATCTTGCACTATGAAATTGAATGCAACCACTGAAATGATGCCTGTAACATGGCCGAGCTTTACCGATATTCACCCTTTCGCCCCTGTCGATCAATCTCAGGGCTATCAGGAGATGTTCGACGATTTGGGCGAGCTGCTATGCGTCATCACTGGGTTTGACTCCTTCTCGCTGCAGCCTAATGCTGGCGCTGCCGGAGAGTATGCCGGTCTGATGGTTATTCGAGCTTATCACTTGGCGAGAGGAGACCATCATCGGAATGTGTGCATTATTCCGGTTTCGGCGCACGGGACAAATCCGGCAAGTGCAGCTATGTGCGGGATGAAAATTGTCTCTGTCGGAACTGATTCGAAGGGAAACATCAATATCGAAGAGTTGAAAAAGGCAGCCGAAGCGAACAGAGAGAACTTATCGGCTCTCATGGTCACCTATCCTTCCACGCACGGTGTGTATGAAGAAGGGATCGATGAGATATGCAAAATCATCCACGACAATGGCGGCCAAGTGTACATGGACGGAGCGAATATGAATGCGCAGGTGGGTCTGACGAGTCCTGGTTGGATCGGAGCCGACGTCTGCCATCTGAATCTCCACAAGACATTTTGCATTCCGCATGGAGGAGGAGGTCCTGGTATGGGCCCCATTGGCGTGAAGAAACACTTGGCTCCATTTTTGCCTTCTCACCCTGTGATACCCACTGGTGGAATTCCGGCGCCGGAAAAAAAGCAGCCGCTGGGGACCATTTCTGCAGCTCCGTGGGGATCTGCACTTATTTTGCCGATTTCTTACACTTACATCGCCATGATGGGATCGAAGGGTCTCACAGACGCATCGAAGATTGCCATTTTGAATGCAAATTACATGGCGAAGCGATTGGAGGATTATTTCCCCATTCTGTTCCGTGGCGTTAATGGAACGGTCGCTCATGAGTTCATCGTCGATCTGAGAGGATTCAAGAATACCGCCGGAATCGAGCCGGAAGATGTTGCGAAACGTCTTATGGACTATGGTTTTCATGCTCCGACAATGTCATGGCCGGTTCCCGGCACTCTCATGATCGAACCCACGGAGAGCGAAAGCAAGGCTGAGCTGGACCGATTCTGCGATGCTTTGATCTCAATTCGAGAAGAAATCGGAGTCATCGAGAAAGGAAAAGCCGACATCCACAACAATGTTCTAAAGAGTGCTCCTCATCCTCCATCGCTGCTCATGGCCGATGCTTGGACAAAACCATACTCTCGCGAATACGCAGCTTTTCCTGCTTCTTGGCTCCGCACTTCCAAGTTCTGGCCTTCCACTGGTCGTGTAGACAATGTGTACGGCGACAGAAACCTCGTCTGCACCCTACTTCCGGCATCCCATGTCGTCGAAGAACAAGCAGCTGCCACAGCTTAG 3462 50.72 MTTSTCGGSGLELCRDDSAAFTLKFIAMASILIAGVSGIAIPLVGRHRSFLKADSNLFVSAKAFAAGVILATGFVHMLSGGSKALSNPCLPTFPWSKFPFSGFFAMIAALVTLLVDFVGTQYYERKQGLNRSYEEQTQGNLRMQRSHDHDHDHGHGHGHDHGHGHSHGIRNSEEESNLRHVVVSQILELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNPKSATIMACFFAITTPIGIGAGTTVASFYNPLSVGALVAEGILDSLSAGILVYMALVDLIAADFLMPRDSGGDRAAASGRPYFPTATFDFVWKEELSSLFGFFMERARRLVNRATLKRLVSGSRQYRLNEQPSFNYSSSMPYSSSRYVSSLVPYLLMARGRRSDSSIGRNSASNVSTGLGSQSRSISVEALKSSDTFPRRHNSATPEEQTNMAAVCGFDSLDSLIDATVPKSIRLESMKFSKIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPSGLKTIAHRVHGLAGAFSLGLKKLGTVEVQGLPFFDTVKVKCDDAYALADAARTSEINLRIVDKNTITVAFDETTTLDDIDALFKVFAGKKPVPFTAASLAPDVQSVVPPGLARESPFLTHPIFNTYHTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPVDQSQGYQEMFDDLGELLCVITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVSVGTDSKGNINIEELKKAAEANRENLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIPTGGIPAPEKKQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLEDYFPILFRGVNGTVAHEFIVDLRGFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIGVIEKGKADIHNNVLKSAPHPPSLLMADAWTKPYSREYAAFPASWLRTSKFWPSTGRVDNVYGDRNLVCTLLPASHVVEEQAAATA 1153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2973853 2980916 + BLOR08772 Blo18g00284 73588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00284 1153 Gene3D Aspartate Aminotransferase, domain 1 956 1091 IPR015422 GO:0003824
Blo18g00284 1153 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 481 1153 - -
Blo18g00284 1153 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 343 481 - -
Blo18g00284 1153 Gene3D - 473 536 IPR015421 GO:0003824
Blo18g00284 1153 Gene3D - 704 955 IPR015421 GO:0003824
Blo18g00284 1153 Coils Coil 809 832 - -
Blo18g00284 1153 CDD GDC-P 665 1060 IPR020581 GO:0004375|GO:0006546
Blo18g00284 1153 Pfam ZIP Zinc transporter 21 307 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Blo18g00284 1153 SUPERFAMILY PLP-dependent transferases 659 1138 IPR015424 -
Blo18g00284 1153 MobiDBLite consensus disorder prediction 141 171 - -
Blo18g00284 1153 TIGRFAM zip: ZIP zinc/iron transport family 11 310 IPR004698 GO:0005385|GO:0016021|GO:0071577
Blo18g00284 1153 Pfam Glycine cleavage system P-protein 640 915 IPR020581 GO:0004375|GO:0006546
Blo18g00284 1153 Pfam Glycine cleavage system P-protein 481 622 IPR020581 GO:0004375|GO:0006546
Blo18g00284 1153 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 481 1153 IPR020581 GO:0004375|GO:0006546
Blo18g00284 1153 MobiDBLite consensus disorder prediction 133 171 - -
Blo18g00284 1153 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 343 481 IPR020581 GO:0004375|GO:0006546
Blo18g00284 1153 SUPERFAMILY PLP-dependent transferases 482 622 IPR015424 -
Blo18g00284 1153 TIGRFAM gcvP: glycine dehydrogenase 481 1137 IPR003437 GO:0004375|GO:0006544
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00284 Blo-Chr18:2973853 Blo19g00071 Blo-Chr19:1747606 4.20E-45 dispersed
Blo17g00288 Blo-Chr17:3033888 Blo18g00284 Blo-Chr18:2973853 0 transposed
Blo17g00287 Blo-Chr17:3031609 Blo18g00284 Blo-Chr18:2973853 2.32E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00284 K00281 - pop:7470701 1256.12