Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00305 ATGAGTCGAAGACGACTTCGGGTCGGATCGGATCGGGTCGAAACTGGATCGGTTCGGGTCGGGTCGAAACTGGGTCGGTTCGATTCGGGTCGGGTCAGATCACTTCAGTTGGACCGAACCTCTTCTTCCTCCTTCTCTCGTCTTCTTCTTCGTCCCGCGAAAACCAGAGGCAGAGTTCCTCTCTGCTTCGTGTCAAGAGTTCCTTTCTCGTCGTTCGTCCGTCGTAGGTTGCCGCTGGAGGAAGAGACTTCGCCGCAGAGGGGAGTTCGACTGGAGGAAGTCACTTCGGGAGGGATTCCTTCGCGGATAGAGGTGTGGCGAGAAGGATTGGGATTTTATATTCATGATATTGGTAACTGGAATCAACTTCCATTTTCTAGGAATATCTTTTTCTGTGGAGCAAAATTTGCTGATTCTGAGACAGATGGATCTTTCAGCTTACAAGCTGTATCTCCAACCCTCTTAGCTGCAGAAAAAGAAGAGGCCAAGGCTGTTTTGAGCTTGTTCTTAAAGAAACGAGGTCTGAGCAATGCACTCGCTGCCAAAACAATTAAAAAGTCTGATCTTTTCATCAACCACCTTGTCTCAAAGCTTCATTCTGTTCACAAGTCTCAGTATCTAATAGGTAGGGAGCTGACGACCCATGAAATTAGAGATGCTCTTAATCCTTACCTTGAATCTCTCCTTAAGGAATATGGAAAAATTCTTGTAGATGTGGTGGAAAGATTTCCAAATCCGCCAACTGGAGAAAAACCAACTTCAACAGGTGCAGTGTCGGCTTCCCTTCCCGTGTCCCATTCAACCATTGTTAATAAGAAGTTGAAAGCTATGTATCTAGTAAGTGAGATAGGTCCAGCAGGAAAGCTCAGGCCTAATCTCCTCTTTCTCATAGAGCTTGGAATGAGTCTCGAACAGATTAAAAAAATTACTCGCAGTTTCCCATCAATTGCTTATGATAGTGTGGAAGGGAAAATAATGGCTTTGGTTGAGTTTTTACTTGATCTAGGAGTACTTAAGTCACACATTCCTACTATCATCAGCAAAATGCCTCAATTATGTGGACTTAGTCTGTCTGAAAAATTGATCCATACAATAGAATATTTGGAATCTCGCGGTATAGATAAGAAACAATGGGCAAAAGTGATATATCGCTCTCCACAGATTCTCACTCATAGCAGACAAAAAGTGGAAGCAACTTTAGAGTTTCTCCATGAGATTGGACTTTCTGAGGAGAAAATAAGTAATATCATGAATCGATGCCCCCGCATTATAAGTTATAGCGTGGAGGACAAATTACGACCCACTGCTCAGTATTTTTGTTCTTTGGGAGTTGATGTGGCTGTTCTTCTTTACCGATCTCCCCAAACTTTTGGATTGAGTTTGGAGGCGAATTTGAAGCCCGTGACAGAATTTTTCTTGGAGAGAGGTTATAGTATGGAGGATGTTGGGACCATGATTTCAAGATTTGGATCTCTTCATACTTTCAGCTTAGCAGAAAACTTGACGCCAAAGTGGGAATTTTTTTTAACCATGGATTACTCATCATCAGAGTTGGTTAAATTTCCCCAGTTTTTTGGTTACAGTTTGGATGGAAGAATTAAACCAAGGTGCGGCGAGGAGAATTGGGATTTTATATTCATGATATTGATAACTGATATATTCACTGAAATGGCTGGGGGAATCATGTGGCAGTTATTGAGGAGGAAAATTCAGTCTCAGAATACTGCCTCTTCAAATATTTCATCCCTTATCTCTAAAAAAGATGATCTTGGACCTGGTTTTATGAAGTCTCTTAGAGCTCTTGCACTTGTTGGAGCTGGTGTTTCTGGGCTTTTGAGCTTTGCAACATTAGCTTCTGCAGATGAAGCTGAACAAGGATTGGAATGTCCAAGCTATCCTTGGCCCCACAAGGGTATTCTGAGTTCATATGATCATGCTTCTATCCGTCGTGGCCATCAAGTTTACCAACAAGTCTGTGCCTCATGTCATTCCATGTCTTTAATATCGTACCGTGATTTGGTCGGTGTTGCATATACAGAAGAGGAGACAAAAGCAATGGCTGCTGAGATTGAGGTTGTTGATGGGCCTAATGATGAAGGCGAGATGTTCACTCGCCCTGGTAAACTTAGTGACCGGTTTCCTCAACCGTATTCCAATGAACAAGCTGCTAGGTTTGCCAATGGAGGAGCATATCCTCCTGATTTAAGTCTCGTAACAAAAGCCCGCCACAATGGACAGAACTATGTATTTGCCCTTCTAACTGGTTACCGCGATCCTCCTGCTGGTGTTTCGATAAGAGAAGGTTTGCATTATAATCCTTATTTTCCTGGGGGTGCTATTGCGATGCCAAAAATGCTTAACGATGGTGCTGTTGAGTACGAGGATGGTACTCCTGCAACAGAAGCTCAGATGGGAAAAGACGTAGTGACTTTCTTGGCATGGGCTGCAGAACCCGAAATGGAAGAGAGGAAACTGATGGGATTCAAATGGATATTTGTTCTCTCCCTTGCTCTACTTCAGGCAGCCTATTACCGACGTTTGAAGTGGTCGGTTCTGAAGTCGCGCAAGCTAGTTCTTGACGTGGTGAACTAG 2592 43.44 MSRRRLRVGSDRVETGSVRVGSKLGRFDSGRVRSLQLDRTSSSSFSRLLLRPAKTRGRVPLCFVSRVPFSSFVRRRLPLEEETSPQRGVRLEEVTSGGIPSRIEVWREGLGFYIHDIGNWNQLPFSRNIFFCGAKFADSETDGSFSLQAVSPTLLAAEKEEAKAVLSLFLKKRGLSNALAAKTIKKSDLFINHLVSKLHSVHKSQYLIGRELTTHEIRDALNPYLESLLKEYGKILVDVVERFPNPPTGEKPTSTGAVSASLPVSHSTIVNKKLKAMYLVSEIGPAGKLRPNLLFLIELGMSLEQIKKITRSFPSIAYDSVEGKIMALVEFLLDLGVLKSHIPTIISKMPQLCGLSLSEKLIHTIEYLESRGIDKKQWAKVIYRSPQILTHSRQKVEATLEFLHEIGLSEEKISNIMNRCPRIISYSVEDKLRPTAQYFCSLGVDVAVLLYRSPQTFGLSLEANLKPVTEFFLERGYSMEDVGTMISRFGSLHTFSLAENLTPKWEFFLTMDYSSSELVKFPQFFGYSLDGRIKPRCGEENWDFIFMILITDIFTEMAGGIMWQLLRRKIQSQNTASSNISSLISKKDDLGPGFMKSLRALALVGAGVSGLLSFATLASADEAEQGLECPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLVTKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVTFLAWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 863
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3190526 3203233 + BLOR08793 Blo18g00305 73609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00305 863 ProSiteProfiles Cytochrome c family profile. 646 753 IPR009056 GO:0009055|GO:0020037
Blo18g00305 863 Gene3D - 623 818 IPR036909 GO:0009055|GO:0020037
Blo18g00305 863 Gene3D - 819 862 - -
Blo18g00305 863 PRINTS Cytochrome C1 signature 697 717 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 PRINTS Cytochrome C1 signature 632 651 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 PRINTS Cytochrome C1 signature 799 818 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 PRINTS Cytochrome C1 signature 818 833 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 PRINTS Cytochrome C1 signature 779 798 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 PRINTS Cytochrome C1 signature 768 779 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 PRINTS Cytochrome C1 signature 652 671 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 PRINTS Cytochrome C1 signature 730 754 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 571 863 - -
Blo18g00305 863 Pfam Cytochrome C1 family 634 850 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 Pfam mTERF 245 404 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 Pfam mTERF 392 537 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 SUPERFAMILY Cytochrome c 628 817 IPR036909 GO:0009055|GO:0020037
Blo18g00305 863 SMART mt_12 343 374 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 SMART mt_12 414 445 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 SMART mt_12 379 409 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 SMART mt_12 483 514 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 SMART mt_12 515 551 IPR003690 GO:0003690|GO:0006355
Blo18g00305 863 PANTHER CYTOCHROME C1 571 863 IPR002326 GO:0009055|GO:0020037
Blo18g00305 863 Gene3D Transcription termination factor 3, mitochondrial 350 542 IPR038538 -
Blo18g00305 863 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 818 862 IPR021157 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01008 Blo-Chr7:29728676 Blo18g00305 Blo-Chr18:3190526 1.13E-43 dispersed
Blo08g00560 Blo-Chr8:18645037 Blo18g00305 Blo-Chr18:3190526 4.82E-09 dispersed
Blo17g00323 Blo-Chr17:3378158 Blo18g00305 Blo-Chr18:3190526 0 dispersed
Blo18g00303 Blo-Chr18:3172211 Blo18g00305 Blo-Chr18:3190526 5.30E-06 dispersed
Blo18g00304 Blo-Chr18:3187577 Blo18g00305 Blo-Chr18:3190526 1.27E-110 tandem
Blo05g00006 Blo-Chr5:62704 Blo18g00305 Blo-Chr18:3190526 2.20E-29 transposed
Blo17g00322 Blo-Chr17:3367831 Blo18g00305 Blo-Chr18:3190526 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13579 PF02167 Cytochrom_C1 3.80E-96 CL0318 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00305 K15032 K00413 tcc:18592717 566.614