Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00335 ATGGGTGCTCTTCAACTTCCTAGTTATGGAGCTGTTGATCGCTCCTCCTTATTCTACTCCAATGATTTATCGTCCTCATTTTGGGGACGAGATTTGTGTCTCGGCTCTAGGTGCAGTTCCAGAGTGAATGTTCAGTTTAATGGGACTTTCCCTAGGGTTTTCGCCACGTCAAATGGCGTACCGTCTCCTTTCAAGATGAACCTCAATGAGTACATGATTACTCTTGAAAAACCTCTCGGTATTCGCTTCGCTCTTTCCATCGACGGAAAAATATTCGTTCACGCTCTTAAAAGAGGGGGTAATGCTGAGAAGTCAAGGATAATCATGGTGGGAGACACATTGAAGAAGGCTAGTGAATCGTCTGGTGGCAAGATTATACAGATCAATGACTTAAGTGATACCCAGAAGATGCTGAAGGAGAAATCAGGATCTTTTAGTCTGGTTCTTGAAAGACCCTTCTCTCCTTTTCCAATTCAACTGCTTCTATTTAGTGATTTTGACGTATTATTCAATAGAGGTCGAGTCCCTATTGCCTCATGGAACAAGAATGTTATAGCACCGGCATCTACTGACAGTGATGGCAATTCTGGGTTTGCTGTGTTTACCTCGAAGTTTTCAACATCACAAGGGTGGAATATTATGAACCAAAATGAGGCTATAATACCACAAAAGCAGAAGAATTCTCTCTTACCTCCCATAAAACAGCTGATCAGTATCTTTTCAGAAGAGGAATCTGGAGATGGAGAGTGGGGTCATGGGAGCTTCCCATTAGAGGAGTATACTAAAGCACTGGATCGGTCGAAAGGCGAGCTATACTATGATCACTTTCTTGGTATGCGCTACAGTAAGATTACGGAGCAAATATATGTGGGATCTTGCATACAAACTGAAGCTGATGTGGAGACTTTGGCAAAGATGGGGGTTACAGCTGTTTTGAATTTCCAAAGTGGAATTGATGCAGAAAATTGGGGTATCAATTCTAAGTTAATTAATGAGTCGTGCCAAAGATTGGATATCCTAATGGTAAACTATCCAATAAGGGAAGGTGATTCTTATGGCTTAAGGAAGAGGCTACCATTTTGTGTGGGGTTACTATTACGCTTGTTAAAGAAGGGCCACCGTGTTTTTATTACTTGTACTACTGGTTTTGATCGATCTCCATCCTGTGTGATTGCATACCTGCATTGGATGACTGATACTTCCCTTCAGGCAGCATATAATTTTGTTACCAGTTTGCATTTATGCAAGCCAGACAGGCCAGCTATTGCTTGGGCTACATGGGATCTCATTGCTATGGTGGAAAATGGTAGGCACGATGGACCCGCGACACATGCTGTGACCTTTGTGTGGAATGGACACGAGGGAGAGGAAGTGCTTTTGGTCGGAGATTTTACTGGAAATTGGAAGGAACCAGTGAGGGCAACCCACAAGGGTGGGCCAAGATATGAGGTTGAATTGAGACTTCCTCAAGGAAAGTACAACTACAAGTATATAGTAAACGGTCAATGGCGGCATTCAACATCATCACCCGCAGAGAGGGACCAGCGGGGGAATGTCAATAACGTGATTGAAGTAGGCGATACTGCCAGTGTTAGACCTGCCGATCAACAGTACAAGAAAGATGCCAATGTCTTAAAGGTGATGGAGAGGCCATTGACCGAAAACGAACGCTTTATGCTGGCCAAGGCTGCTCGATGCATCGCATTCTCCGTCTGCCCAATCAGGCTAGCTCCCAAGTAG 1740 43.97 MGALQLPSYGAVDRSSLFYSNDLSSSFWGRDLCLGSRCSSRVNVQFNGTFPRVFATSNGVPSPFKMNLNEYMITLEKPLGIRFALSIDGKIFVHALKRGGNAEKSRIIMVGDTLKKASESSGGKIIQINDLSDTQKMLKEKSGSFSLVLERPFSPFPIQLLLFSDFDVLFNRGRVPIASWNKNVIAPASTDSDGNSGFAVFTSKFSTSQGWNIMNQNEAIIPQKQKNSLLPPIKQLISIFSEEESGDGEWGHGSFPLEEYTKALDRSKGELYYDHFLGMRYSKITEQIYVGSCIQTEADVETLAKMGVTAVLNFQSGIDAENWGINSKLINESCQRLDILMVNYPIREGDSYGLRKRLPFCVGLLLRLLKKGHRVFITCTTGFDRSPSCVIAYLHWMTDTSLQAAYNFVTSLHLCKPDRPAIAWATWDLIAMVENGRHDGPATHAVTFVWNGHEGEEVLLVGDFTGNWKEPVRATHKGGPRYEVELRLPQGKYNYKYIVNGQWRHSTSSPAERDQRGNVNNVIEVGDTASVRPADQQYKKDANVLKVMERPLTENERFMLAKAARCIAFSVCPIRLAPK 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3476759 3481544 + BLOR08823 Blo18g00335 73639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00335 579 ProSiteProfiles PDZ domain profile. 72 153 IPR001478 GO:0005515
Blo18g00335 579 CDD E_set_AMPKbeta_like_N 446 525 - -
Blo18g00335 579 Gene3D Protein tyrosine phosphatase superfamily 273 560 IPR029021 -
Blo18g00335 579 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 24 579 - -
Blo18g00335 579 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 275 413 IPR029021 -
Blo18g00335 579 SMART dsp_5 280 430 IPR020422 GO:0006470|GO:0008138
Blo18g00335 579 SUPERFAMILY PDZ domain-like 56 159 IPR036034 GO:0005515
Blo18g00335 579 Gene3D Immunoglobulins 433 530 IPR013783 -
Blo18g00335 579 Pfam Glycogen recognition site of AMP-activated protein kinase 446 527 IPR032640 -
Blo18g00335 579 CDD DSP_laforin-like 279 424 IPR045204 GO:0019203|GO:0046838
Blo18g00335 579 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 24 579 IPR030066 GO:0005983
Blo18g00335 579 Pfam Dual specificity phosphatase, catalytic domain 288 416 IPR000340 GO:0008138|GO:0016311
Blo18g00335 579 ProSiteProfiles Dual specificity protein phosphatase domain profile. 280 438 IPR020422 GO:0006470|GO:0008138
Blo18g00335 579 SUPERFAMILY E set domains 444 526 IPR014756 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00691 Blo-Chr13:29671812 Blo18g00335 Blo-Chr18:3476759 3.62E-28 dispersed
Blo14g00328 Blo-Chr14:3385372 Blo18g00335 Blo-Chr18:3476759 1.54E-07 dispersed
Blo18g00335 Blo-Chr18:3476759 Blo04g00349 Blo-Chr4:2735410 4.24E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00335 - - csv:101214241 871.307