Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00399 ATGGATGGACCGAGTTTGCGTGGTGCCAGTAGCGTGGATGTATATCTTCCCAATTACAAACTTGGGAAGACTCTCGGAATTGGTTCATTTGGTAAGGTCAAAATTGCAGAGCATGTATTGACGGGTCATAAGGTTGCTATCAAGATCCTCAATCGTAAAAAGATAAAGAACTTGGATATGGAAGAGAAAGTGAGAAGGGAAATCAAGATACTGAGATTGTTTATGCATCCTCACATAATAAGACTCTATGAGGTTATTGAGACTCCAGCTGACATTTTTGTTGTGATGGAGTTTGTGAAATGTGGGGAGCTCTTTGATTATATTGTGGAGAAGGGTCGGTTGCAGGAAGATGAAGCTCGCACTTTTTTCCAACAGCAGATAATATCTGGTGTGGAGTACTGCCACAGGAATAGGGTAGTTCATAGAGACCTTAAACCTGAGAATTTGCTTTTGGATTCCAAGCGCAATGTAAAGATTGCAGACTTTGGGTTGAGCAATATAATGCGTGATGGTCATTTTCTGAAGACGAGTTGTGGAAGTCCTAATTACGCTGCTCCTGAGGTTATTTCTGGTAAACTGTATGCTGGACCTGAAGTAGATGTATGGAGCTGTGGTGTTATATTGTATGCTCTTCTATGTGGTACACTTCCATTCGATGATGAAAACATACCCAACCTTTTTAAGAAAATAAAGGGTGGGATATATACTCTTCCCAGTCATTTATCTCCTGGTGCTAGAGATTTGATCCCAAGAATGCTCGTGGTAGAACCTACAAAGCGTATGACCATACCTGAGATTCGCCAACATCTTTGGTTCCAGGCCCATCTTGCACGCTATTTAGCCGTGCCTCCTCCTGATACAATGCAACAAGCTAAAAAGATTGATGAAGACATTCTCCAAGAAGTGGTGAAAATGGGATTTGACAGAAACCAGCTGTTGGAGTCTCTTCATAACAGAATTCAAAATGAGGCCACAGTTACATATTATTTGTTGCTGGATAACCGGTTTCGCGTCTCTAGTGGCTATCTTGTAGATGAGTTTCAGGAAACGATGGAATCTGACATCAACTCCATGCATCCAAGTGCCAAGTCTCCATCTGTTGGACATCGTCTTCCTGGATTTATGGATTATCAAGGGATGGGATTGAGACCACAGTATCCCCTAGAGCGTAAATGGGCACTTGGATTACAGTCAAAAGCTCATCCTCGTGAAATAATGATGGAAGTCCTCAAGGCCCTGCAAGTACTCAATGTGGGGTGGAAGAAGATTGGACATTACAACATGAAATGTAGGTGGATACCTGGCATTCAGGATCATCACGGAGCCATGGTAAACGATCCTGTACACGGTAATCATCACCTTGGTGATGATTCAACCATCATTGAGAATGATGGGGTTTGTAAATCTTCAAATGTTGTCAAGTTTGAAGTACAGCTTTACAAGACGAGGGAGGATAAGTATCTTCTTGATCTACAGAAAGTTCAAGGCCCTCAGTTTTTGTTCTTGGATCTTTGTGCGGCTTTCCTTGCTCAGCTTAGAGTTCTTTAG 1548 42.12 MDGPSLRGASSVDVYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRKKIKNLDMEEKVRREIKILRLFMHPHIIRLYEVIETPADIFVVMEFVKCGELFDYIVEKGRLQEDEARTFFQQQIISGVEYCHRNRVVHRDLKPENLLLDSKRNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVEPTKRMTIPEIRQHLWFQAHLARYLAVPPPDTMQQAKKIDEDILQEVVKMGFDRNQLLESLHNRIQNEATVTYYLLLDNRFRVSSGYLVDEFQETMESDINSMHPSAKSPSVGHRLPGFMDYQGMGLRPQYPLERKWALGLQSKAHPREIMMEVLKALQVLNVGWKKIGHYNMKCRWIPGIQDHHGAMVNDPVHGNHHLGDDSTIIENDGVCKSSNVVKFEVQLYKTREDKYLLDLQKVQGPQFLFLDLCAAFLAQLRVL 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4266530 4270498 - BLOR08887 Blo18g00399 73703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00399 515 Gene3D Kinase associated domain 1, KA1 395 513 - -
Blo18g00399 515 CDD UBA_SnRK1_plant 294 334 - -
Blo18g00399 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Blo18g00399 515 CDD STKc_AMPK_alpha 16 272 - -
Blo18g00399 515 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 514 - -
Blo18g00399 515 Gene3D Transferase(Phosphotransferase) domain 1 10 354 - -
Blo18g00399 515 SUPERFAMILY Protein kinase-like (PK-like) 16 290 IPR011009 -
Blo18g00399 515 SMART uba_6 295 332 IPR015940 -
Blo18g00399 515 PANTHER SERINE/THREONINE KINASE 8 514 - -
Blo18g00399 515 ProSiteProfiles Protein kinase domain profile. 19 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00399 515 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 466 514 IPR001772 -
Blo18g00399 515 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 293 333 IPR015940 -
Blo18g00399 515 Pfam Kinase associated domain 1 472 514 IPR001772 -
Blo18g00399 515 SMART serkin_6 19 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00399 515 Pfam Protein kinase domain 19 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00399 515 SUPERFAMILY KA1-like 329 514 IPR028375 -
Blo18g00399 515 CDD AMPKA_C 389 512 - -
Blo18g00399 515 Pfam UBA/TS-N domain 294 330 IPR015940 -
Blo18g00399 515 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00372 Blo18g00399 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00399 Blo-Chr18:4266530 Blo02g00304 Blo-Chr2:3068255 6.58E-86 dispersed
Blo17g00372 Blo-Chr17:4116336 Blo18g00399 Blo-Chr18:4266530 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84824 PF00069 Pkinase 2.10E-76 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00399 K07198 - cit:102626026 898.656