Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo18g00400 | ATGGAGGTTCTGTTCAGAAAGTCGCCGCCGACAATGGTGGCGATTGCGGTTGCGGTGTGTGTTTTAGGGATGATGGTGCCAGAAGTTTCAGGCACTCGGTGGACTGTAGGGAGTAACATGGGTTGGACCACCGGTGTTAACTACACTATTTGGGCTCAAGATAAGCACTTCTACAATAGCGACTGGCTCTTCTTTGTTTACGACCGGAATCAAATGAACGTTCTAGAGGTGAACCAAACGGACTACGAGGCCTGCAATTCCGATCACCCGAAACATAATTGGACAACGGGTGCCGGAAGAGATGTCGTCCCGCTCAACGTGACCAGGCCCTACTATTTCATCAGCGGCAAAGGTTTCTGCTATGGAGGTATGAAGCTGGCTATTAACGTTGAGAATTTACCTCCTCCTCCATCCTCTTCGCCATTGGATCAGAAGAACTCTGCTCCGACTCTAACTTACGGATTGACCCGTCTTCTTCTTCCCGTGGCTGTAGCGGTCGGAGTCTTTTGGGAAGCTCTTTTCCGGCTCCGGTAG | 534 | 50.75 | MEVLFRKSPPTMVAIAVAVCVLGMMVPEVSGTRWTVGSNMGWTTGVNYTIWAQDKHFYNSDWLFFVYDRNQMNVLEVNQTDYEACNSDHPKHNWTTGAGRDVVPLNVTRPYYFISGKGFCYGGMKLAINVENLPPPPSSSPLDQKNSAPTLTYGLTRLLLPVAVAVGVFWEALFRLR | 177 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 4282481 | 4283678 | - | BLOR08888 | Blo18g00400 | 73704 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo18g00400 | 177 | Pfam | Plastocyanin-like domain | 42 | 124 | IPR003245 | GO:0009055 | |
| Blo18g00400 | 177 | Gene3D | - | 31 | 133 | IPR008972 | - | |
| Blo18g00400 | 177 | ProSiteProfiles | Phytocyanin domain profile. | 32 | 132 | IPR003245 | GO:0009055 | |
| Blo18g00400 | 177 | PANTHER | LAMIN-LIKE PROTEIN | 12 | 167 | - | - | |
| Blo18g00400 | 177 | PANTHER | BLUE COPPER PROTEIN | 12 | 167 | IPR039391 | GO:0009055 | |
| Blo18g00400 | 177 | SUPERFAMILY | Cupredoxins | 31 | 130 | IPR008972 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo17g00375 | Blo18g00400 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo17g00375 | Blo-Chr17:4171405 | Blo18g00400 | Blo-Chr18:4282481 | 8.77E-85 | dispersed | |
| Blo18g00400 | Blo-Chr18:4282481 | Blo07g00213 | Blo-Chr7:2706591 | 1.63E-15 | dispersed | |
| Blo10g00507 | Blo-Chr10:11266716 | Blo18g00400 | Blo-Chr18:4282481 | 9.55E-29 | transposed | |
| Blo17g00374 | Blo-Chr17:4139278 | Blo18g00400 | Blo-Chr18:4282481 | 3.78E-82 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo18g00400 | - | - | pop:7496000 | 254.988 |