Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo18g00414 | ATGGGGAGAGGAAGAGTTGAACTGAAGAGGATAGAAAACAAGATAAACAGGCAGGTTACATTTGCAAAGAGGAGAAACGGGCTTTTTAAGAAAGCCTATGAGCTTTCCGTTCTCTGTGATGCTGAGGTTGCGCTTATCATCTTCTCCAATCGTGGCAAGCTCTATGAATTCTGCAGCACCTCTAACATGCTTAGAACCCTGGAAAGGTACCAAAAATGTAGCTATGGTGCTGTGGAAGTCAACAGACCATGCAAGGAGCTTGAGCAGAGCAGCTACAGAGAGTATTTGAAGCTAAAATCCAGATTTGAGTCCCTACAAAGAACTCAAAGAAATCTGCTTGGAGAAGAATTGGGTCCATTGAACTCGAAAGAGCTTGAACAGCTTGAGCATCAACTGGAGGCATCCCTAAAGCAAGTCAGATCCACCAAGACCCAGTACATGCTTGATCAGCTTTCTGATCTTCAAACCAAGGAACAAATGCTGATTGAAGCTAACAGAGCTTTGACTATAAAGCTGGATGAAATCAGCTCGAGAAATCACCTCAGGCAAGCTTGGGAAGCTGGGGAGCAAAACATGTCATATGGCCCGCAGAATGCTGCTCAAACTCAAGGATTCTTCCAGCCTCTGGACTGCAATGCCACTTTGCAAATTGGATACAGTGGAGCTGATGAGATGGCGGCAACTGGATCAGCCCACGGCCAGCAAGTCACCGGTTTCATACCTGGATGGATGCTCTGA | 738 | 46.07 | MGRGRVELKRIENKINRQVTFAKRRNGLFKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLRTLERYQKCSYGAVEVNRPCKELEQSSYREYLKLKSRFESLQRTQRNLLGEELGPLNSKELEQLEHQLEASLKQVRSTKTQYMLDQLSDLQTKEQMLIEANRALTIKLDEISSRNHLRQAWEAGEQNMSYGPQNAAQTQGFFQPLDCNATLQIGYSGADEMAATGSAHGQQVTGFIPGWML | 245 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 4509735 | 4512985 | + | BLOR08902 | Blo18g00414 | 73718 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo18g00414 | 245 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Blo18g00414 | 245 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Blo18g00414 | 245 | Pfam | K-box region | 88 | 172 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Blo18g00414 | 245 | PANTHER | DEVELOPMENTAL PROTEIN SEPALLATA 1 | 1 | 228 | - | - | |
Blo18g00414 | 245 | CDD | MADS_MEF2_like | 2 | 76 | IPR033896 | GO:0000977|GO:0045944 | |
Blo18g00414 | 245 | ProSiteProfiles | K-box domain profile. | 88 | 178 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Blo18g00414 | 245 | SUPERFAMILY | SRF-like | 2 | 76 | IPR036879 | GO:0003677|GO:0046983 | |
Blo18g00414 | 245 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 1 | 228 | - | - | |
Blo18g00414 | 245 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Blo18g00414 | 245 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Blo18g00414 | 245 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Blo18g00414 | 245 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Blo18g00414 | 245 | Coils | Coil | 122 | 145 | - | - | |
Blo18g00414 | 245 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Blo18g00414 | 245 | Gene3D | - | 13 | 83 | IPR036879 | GO:0003677|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00140 | Blo-Chr1:1906764 | Blo18g00414 | Blo-Chr18:4509735 | 1.70E-61 | dispersed | |
Blo02g00195 | Blo-Chr2:1761044 | Blo18g00414 | Blo-Chr18:4509735 | 4.71E-100 | dispersed | |
Blo07g00016 | Blo-Chr7:341868 | Blo18g00414 | Blo-Chr18:4509735 | 2.78E-99 | dispersed | |
Blo11g00805 | Blo-Chr11:12765549 | Blo18g00414 | Blo-Chr18:4509735 | 1.20E-50 | dispersed | |
Blo15g00152 | Blo-Chr15:1517856 | Blo18g00414 | Blo-Chr18:4509735 | 1.38E-39 | dispersed | |
Blo18g00414 | Blo-Chr18:4509735 | Blo01g00461 | Blo-Chr1:5098214 | 3.51E-44 | dispersed | |
Blo11g00324 | Blo-Chr11:2653451 | Blo18g00414 | Blo-Chr18:4509735 | 6.15E-135 | wgd | |
Blo17g00396 | Blo-Chr17:4438325 | Blo18g00414 | Blo-Chr18:4509735 | 1.31E-152 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13589 | PF01486 | K-box | 1.10E-26 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo18g00414 | K09264 | - | jre:108989428 | 405.216 |