Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00445 ATGTCTCCTATCTTCACGAGCATAATCATGATCATAATCTTTGTTCAAGTTCGATTATCTCTAGGTGCAGATGATGAGCAGTACATAAACTGCAGTTCTACATTCCAGTGTGCTAATATTTCAACTCTCAGCTATCCCTTCTGGGGAGGAAATCGGCCAAGTTATTGTGGCCACCCTGAGTTTCAGTTGAACTGCACTGGTGAAGTCCCGTTGATCACTATCGCTTCGACACGGTACAGAGTCCTCGAAATCAATGAAGCAAACACTCTTAATGTTTCTAGATTGGATTATTGGAAAGATGTTTGTCCTCAATACCTTGTTAATTCCACTTTGGATGAAACGTCCTTTAGCTATACCTCATCTAGCGAAGAGCTAATTCTATTCTATGGATGCTCAACACTTAATCTTATACCGAGTTCTACCTTGACTACTCAATTCAACTGCACCATAAATGAAACTGCTTATGCAAACTTCTTTGTGACCCAGAATTCTGTATCGAGTGAAGTAGTTGGTCAAATGATAAACTTATGCCATAGAAATGTTCATCTTTGGATTTTCGAATCAAAAATCCAGACTTTAGCTAGCAATATGGTCAAAGAGAGTTTGATTAGTGCGATAGACTCTGGTTTTCAATTAGAGTGGAAGATTAACACCAGCGATTTTTGTGATGAATGCCAAAGGTCGGGAGGTTTGTGTGGTTCAAACACGAATTCTGGCGTATTTACTTGCCTTTGCAAGGATGGATCATCTTCATCAACTTGTGGATCAAGAGAAGGAAATAAAAGTATCAAAGCACCCATCATAATAGGCGTTTCAGTTGGAGGTGCAGCCATTTTGGCTGTGCTTTTAGGCTGCAGGATGGTCTTTGTTAGACAAAAAAAGAAGAAACTAGCTTTTCAGGCTAAATCCAAAGACCTTCCTTCCCCTCCTTCAAGCAATGGCTTTTCTTCTCCCTCCACAAACCTCTCCAAAAGCATTCCTTCTTATACCTATTCAAAAGTCAGCATTGAGAGGGGTGGGTACAAGAGCAACTACTTTGGAGCACAAGTCTTTAGTTATGAAGAACTTGAAGAAGCCACCGATAGTTTTCACGTGTCTAAAGAACTCGGAGACGGAGGCTTTGGAAAGGTTTATTATGGGAAGCTGCGAGACAACCGAGCTGTTGCCGTGAAGCGCCTTTATGAACATAATTTGAAACGTGTAGAGCAGTTCAAGAATGAAGTAGAGATTCTCACTCGTTTGCAACACCATAACCTCGTGAAGCTTTACGGATGCACATCGAGACATAGCCAAGAGCTCCTCCTCGTGTATGAATTCGTTTCGAATGGAACAGTGGCTGACCATCTCCATGGAAACAGAGCTAACTCTGGTTTGCTCACTTGGCCTCTCCGATTAAGAATCGCCATAGAGACAGCCGATGCTCTGGCTTACCTCCATAGTTCGGACATTATTCATCGAGATGTCAAAACTGATAACATTCTTCTCGACCACAACTTTCACGTAAAAGTGGCTGATTTCGGGTTATCAAGGCTTTTTCCGACAAATGTGACCCATGTTTCGACGGCCCCACAAGGGACTCCGGGATATGTCGATCCAGAGTATTACCAGTGCTACCATCTCACTGACAAGAGTGATGTTTATAGTTTTGGGGTGGTCTTGATCGAGTTAATTTCGTCATTACAAGCAGTTGATACGAATAGGCATCGAACGGATATCAATTTGGCCAACATGGCACTCACTAAAATTCAAAAACATGCATTGGCTGAGTTAGTAGATCCATCTCTCGAGTTTGAAAAGGATTATGCAGTGAGAAGGATTATAACATTGGTAGCGGAATTGGCTTTTCGGTGTTTACATGTCCAGAGAGATGAGAGACCTCCTATGAGCGAAGTCTTGGAGGCGTTAAGAGGACTAGAGAACGATGAATTGGCAGCTCGAAAAGCTGAAGTAGTCGATTTTGGAGACGACGATGTAGGACTTTTAAGGAATATGCCTTCCCCATTTTCGCCGGACGATTCTGTGACCGATAAATGGGTAAGCATCTCTTCTACTTCTTTCATTCTGGCATATTGA 2073 42.21 MSPIFTSIIMIIIFVQVRLSLGADDEQYINCSSTFQCANISTLSYPFWGGNRPSYCGHPEFQLNCTGEVPLITIASTRYRVLEINEANTLNVSRLDYWKDVCPQYLVNSTLDETSFSYTSSSEELILFYGCSTLNLIPSSTLTTQFNCTINETAYANFFVTQNSVSSEVVGQMINLCHRNVHLWIFESKIQTLASNMVKESLISAIDSGFQLEWKINTSDFCDECQRSGGLCGSNTNSGVFTCLCKDGSSSSTCGSREGNKSIKAPIIIGVSVGGAAILAVLLGCRMVFVRQKKKKLAFQAKSKDLPSPPSSNGFSSPSTNLSKSIPSYTYSKVSIERGGYKSNYFGAQVFSYEELEEATDSFHVSKELGDGGFGKVYYGKLRDNRAVAVKRLYEHNLKRVEQFKNEVEILTRLQHHNLVKLYGCTSRHSQELLLVYEFVSNGTVADHLHGNRANSGLLTWPLRLRIAIETADALAYLHSSDIIHRDVKTDNILLDHNFHVKVADFGLSRLFPTNVTHVSTAPQGTPGYVDPEYYQCYHLTDKSDVYSFGVVLIELISSLQAVDTNRHRTDINLANMALTKIQKHALAELVDPSLEFEKDYAVRRIITLVAELAFRCLHVQRDERPPMSEVLEALRGLENDELAARKAEVVDFGDDDVGLLRNMPSPFSPDDSVTDKWVSISSTSFILAY 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4935945 4939446 - BLOR08933 Blo18g00445 73749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00445 690 SMART serkin_6 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00445 690 MobiDBLite consensus disorder prediction 301 320 - -
Blo18g00445 690 Gene3D Transferase(Phosphotransferase) domain 1 440 651 - -
Blo18g00445 690 Pfam Protein kinase domain 363 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00445 690 ProSiteProfiles Protein kinase domain profile. 363 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00445 690 PANTHER - 5 677 - -
Blo18g00445 690 Gene3D Phosphorylase Kinase; domain 1 337 439 - -
Blo18g00445 690 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 677 IPR044652 -
Blo18g00445 690 SUPERFAMILY Protein kinase-like (PK-like) 345 638 IPR011009 -
Blo18g00445 690 Pfam Wall-associated receptor kinase galacturonan-binding 31 92 IPR025287 GO:0030247
Blo18g00445 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Blo18g00445 690 Pfam Wall-associated receptor kinase C-terminal 148 248 IPR032872 -
Blo18g00445 690 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Blo18g00445 690 MobiDBLite consensus disorder prediction 305 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00445 Blo-Chr18:4935945 Blo09g00230 Blo-Chr9:10442710 1.83E-69 dispersed
Blo18g00445 Blo-Chr18:4935945 Blo18g00446 Blo-Chr18:4940478 4.03E-33 tandem
Blo05g00602 Blo-Chr5:15498780 Blo18g00445 Blo-Chr18:4935945 3.70E-85 transposed
Blo16g00132 Blo-Chr16:2986830 Blo18g00445 Blo-Chr18:4935945 0 transposed
Blo18g00827 Blo-Chr18:24383066 Blo18g00445 Blo-Chr18:4935945 2.80E-83 transposed
Blo11g00359 Blo-Chr11:3039905 Blo18g00445 Blo-Chr18:4935945 5.31E-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84825 PF00069 Pkinase 9.30E-49 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00445 - - jre:108988017 761.14