Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo18g00463 | ATGGAGCACTTGTTGGGTCTTCTTAAAATTCATGTTTGCAAGGGTGTCAACCTCGCTGTGAGGGATGTAACGACCAGTGACCCTTACGTTGTTGTCAAAATGGGAAAACAGTTTCTTATGTGCTTGAGTTTCTTTACTTCTTGCTTTTGGTTGAAGAATCTTTTTACTCATCTGGATTTCAGTTCTAGAATTGTTTTGCCGTTCGTTAATTTTGATGCCTTTAAAAGAGTTTATTCCTTCGCTCTTAGATCTTCAATTTATTCCAGCTCTTTCCAATTATCATTAACTAATCACCTCCTCATTGTGTTGTATCTTGTTTACTGTTTGAAGCAGAAACTGAAAACTCATGTGGTGAAGAAAAACATTAATCCAGAGTGGAATGAAGAGTTAACCATGGCAATCTTAGATGCTTCTCAACCGATTAAACTGTTTGTGTATGACAAAGATATGTTTTCACTGGATGACAAAATGGGAGAGGCAGAGTTTGAGATTGAAACATTTCTGGAAGCCATGAGAATGCGCTTGGATGGCCTCCCAAGCGGAACAATTATAACGAGGGTTCAACCGTCGAGGCAAAATTGCTTATCGGAAGAGAGTAGCATTGTGTGGGAAGAAGGGCAAGTTTTCCAAAACTTGTTCCTCAGACTAAGAAATGTGGAATGTGGTGAAATTCAATTGAAGCTGCACTGGGTTGATATTCCTGGCTCAAGAGGCTTGGCTCAGGCTACTCATTTGTCATCTCTAGATACGACCAACTTGTGTCCTTTTGAGGTGTATGGAAGCTCAATTGAAAGAACTCAACCTGAAAGCAGAAGCGCCCACCATTTAGTCATCTCCATCCCAGCCTCTAACTTTATATCCACGGCAGCCGGATAA | 876 | 40.64 | MEHLLGLLKIHVCKGVNLAVRDVTTSDPYVVVKMGKQFLMCLSFFTSCFWLKNLFTHLDFSSRIVLPFVNFDAFKRVYSFALRSSIYSSSFQLSLTNHLLIVLYLVYCLKQKLKTHVVKKNINPEWNEELTMAILDASQPIKLFVYDKDMFSLDDKMGEAEFEIETFLEAMRMRLDGLPSGTIITRVQPSRQNCLSEESSIVWEEGQVFQNLFLRLRNVECGEIQLKLHWVDIPGSRGLAQATHLSSLDTTNLCPFEVYGSSIERTQPESRSAHHLVISIPASNFISTAAG | 291 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 5261428 | 5265436 | - | BLOR08951 | Blo18g00463 | 73767 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo18g00463 | 291 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 37 | IPR044562 | - | |
| Blo18g00463 | 291 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 109 | 237 | IPR044562 | - | |
| Blo18g00463 | 291 | Gene3D | C2 domain | 2 | 231 | IPR035892 | - | |
| Blo18g00463 | 291 | ProSiteProfiles | C2 domain profile. | 1 | 177 | IPR000008 | - | |
| Blo18g00463 | 291 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 5 | 168 | IPR035892 | - | |
| Blo18g00463 | 291 | SMART | C2_3c | 7 | 176 | IPR000008 | - | |
| Blo18g00463 | 291 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE | 1 | 37 | - | - | |
| Blo18g00463 | 291 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE | 109 | 237 | - | - | |
| Blo18g00463 | 291 | Pfam | C2 domain | 7 | 37 | IPR000008 | - | |
| Blo18g00463 | 291 | Pfam | C2 domain | 104 | 170 | IPR000008 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo11g00975 | Blo-Chr11:23205757 | Blo18g00463 | Blo-Chr18:5261428 | 9.31E-44 | dispersed | |
| Blo17g00457 | Blo-Chr17:6050322 | Blo18g00463 | Blo-Chr18:5261428 | 6.93E-18 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo18g00463 | - | - | qsu:112031486 | 209.92 |