Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00464 ATGAAAAGGGAGTACCAAGACGGATCTGCAACCGGCTATGGCGGAAGAAGAGTGGGGAATTCTGGAAAACCAGAGAGCTCAGTTTTGCAGTCAGCGAGAAAGGTTAAGATTTGGGAAGAACAACGAGATGCAGGAGGAATGGATGAGCTTCTTGCTGTGTTGGGGTACCAGGTTATGTCGGCGGACATGCCTGACGTTGCTCAGAAGATCGAAGAGCTCGAAATGGTCATGGGTACTGCTCAAGAAGATGCAATTTCTCAACTCTCTTGTGACACTGTTCATTACAATCCTGCTGATCTTTCTAGCTGGGTTCAAAGCATGCTTTCCGGGCTTAATAACCCTCTGAACAGCCTCGATTCTCTGCAAAATCAAGACGATAATCCGATTCTTGTCCCTCCCGAAGTTTCCGCGGTCATCAATGGCGGATTCTCGAATTCTCAGCGGCCTTTGGAGAATCAATCCAGGGTTTTCGACTATTCGGAGTTTGATCTAAGAGCAATACCCGGAGTTGCAGTTTGTCCTCAAATTGATTCGTCGAGAAAACGATTGAAAACTTCGCTAATTTCAGATTCATCGTCTTCTTCCTCCGGAGTTCCTGCTCCGACTTCTGACCAATCCCGACCGGTTGTTCTCGTCGACTCGCAGGAAACTGGCGTACGGCTCGTCCACACTCTCATGGCCTGTGCAGAAGCGGTTCAAGAAGACAACATGAAGCTCGCCGATGCTTTGGTGAAACATATCGGAATTCTGGCCGCTTCTCAGGCTGGTGCCATGCGGAAAGTGGCCACCTACTTAGCGGAAGCACTCGCTCGCAGGATTTACAGAATTTACCCTCAAGATTGTCTCAACCCATCTTACACCGATCTACTCGAGATGCACTTTTACGAGACCTGTCCTTACCTCAAATTCGCTCATTTCACTGCAAATCAAGCGATTCTCGAAGCTTTTGCAAACGCTAGCAGAGTCCACGTTATTGATTTCGGGATAAAACAGGGGATGCAGTGGCCGGCTTTGATGCAGGCTCTCGCACTACGGCCTGGAGGGCCACCGGCTTTCCGCCTGACTGGAATCGGCCCGCCTCAACCCGATAACACCGACGCTTTACAGCAAGTTGGTTGGAAATTAGCGCAATTTGCCGACAACATTGGAATTAAATTTGTGTTTCGTGGGTTTCTTTGCAACTGTCTCGCCGATCTGGAGCCTGAAATTCTTGATATCCGGCCACCAGAGTTGGAAACTGTTGCGGTGAACTCAGTTTTCGAGCTTCACCGTCTTCACTCTCGGCCTTCCGCCATTGATAAGGTGCTTTCTTCGATCAAGTGTATGAAGCCCAAAATTGTCACGATGGTGGAGCAAGAAGCGAATCACAATGGACCGGTTTTCTTGGACCGGTTCACTGAGGCACTCCATTATTATTCCAACCTCTTTGACTCGTTGGAAGGGTCGGCTAGGCCGAGCCAGGACCTAGTCATGTCGGAGTTGTATCTCGGGAGACAGATATGCAACGTGGTGGCTTGTGAAGGTTCCGACCGAGTGGAGCGGCACGAGACATTGACCCAATGGCGGACTCGGATGGGATCGGCCGGGTTCGATCCTGTTCACCTCGGATCGAACGTGTTTAAGCAGGCGAGCATGCTACTGGCTCTGTTCGCGGGCGGGGATGGGTACAGAGTGGAGGAAAACAATGGGTGTCTGACGCTCGGATGGCATACACGGCCGTTGATCGCCACCTCGGCCTGGCAATTAGCTGCCGGAGAAATTCAGTGA 1767 50.76 MKREYQDGSATGYGGRRVGNSGKPESSVLQSARKVKIWEEQRDAGGMDELLAVLGYQVMSADMPDVAQKIEELEMVMGTAQEDAISQLSCDTVHYNPADLSSWVQSMLSGLNNPLNSLDSLQNQDDNPILVPPEVSAVINGGFSNSQRPLENQSRVFDYSEFDLRAIPGVAVCPQIDSSRKRLKTSLISDSSSSSSGVPAPTSDQSRPVVLVDSQETGVRLVHTLMACAEAVQEDNMKLADALVKHIGILAASQAGAMRKVATYLAEALARRIYRIYPQDCLNPSYTDLLEMHFYETCPYLKFAHFTANQAILEAFANASRVHVIDFGIKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQFADNIGIKFVFRGFLCNCLADLEPEILDIRPPELETVAVNSVFELHRLHSRPSAIDKVLSSIKCMKPKIVTMVEQEANHNGPVFLDRFTEALHYYSNLFDSLEGSARPSQDLVMSELYLGRQICNVVACEGSDRVERHETLTQWRTRMGSAGFDPVHLGSNVFKQASMLLALFAGGDGYRVEENNGCLTLGWHTRPLIATSAWQLAAGEIQ 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5297705 5299471 - BLOR08952 Blo18g00464 73768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00464 588 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 581 IPR005202 -
Blo18g00464 588 SMART DELLA_2 48 121 - -
Blo18g00464 588 MobiDBLite consensus disorder prediction 1 30 - -
Blo18g00464 588 ProSiteProfiles GRAS family profile. 212 581 IPR005202 -
Blo18g00464 588 PANTHER DELLA PROTEIN RGL1 43 581 IPR030006 GO:0003712|GO:0005634
Blo18g00464 588 Pfam Transcriptional regulator DELLA protein N terminal 48 114 IPR021914 -
Blo18g00464 588 Pfam GRAS domain family 221 581 IPR005202 -
Blo18g00464 588 Gene3D - 46 111 IPR038088 -
Blo18g00464 588 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00085 Blo-Chr12:5701876 Blo18g00464 Blo-Chr18:5297705 1.95E-50 dispersed
Blo18g00464 Blo-Chr18:5297705 Blo02g00135 Blo-Chr2:1150119 3.06E-71 dispersed
Blo10g00896 Blo-Chr10:27940535 Blo18g00464 Blo-Chr18:5297705 1.68E-61 transposed
Blo17g00458 Blo-Chr17:6072350 Blo18g00464 Blo-Chr18:5297705 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13592 PF03514 GRAS 2.10E-134 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00464 K14494 - tcc:18601873 846.654