Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo18g00475 | ATGACCAATCCAGAGGCAGAGGAGAGAGAGTACGAAGTGGAGGAAATGAGAGAGAGGATAAAGTCTTCGAGAGGAAGCCGATTTAATCTGATAGAGAACGAGTTGAGGACGGAGTCGACGCAAAGAAAGTTTTGCCGCGAGAGCTTCATCAATGGCATCCAGGACCTCTCCACTGGCCTCGTTATCCACCCTGAAAACAGGTGGTACTCGGCGTGGATCAACTTCATACTGATATGGGCAGTTTACTCGTCTTTCTTTACGCCAATGGAGTTTGGATTCTTCAGGGGACTGCCTGAGAATCTCTTCATTCTTGACATTGCTGGACAGATTACCTTTTTCCTTGACATCGTTCTTCAGTTCTTTGTTGCTTACAGAGACAGTCAGACCTATATTATGATTCACAAACGTACCCCTATTGCTCTCCGGTCCGTCTTCTCTTTCCCCTCTCTATTTCTGCCTCAATACACCATTTTTCATGTTTGTCAACTCTTCAGGTACTTGAAATCTGGGTTTGTGATTGATTTTCTTGGATGCATGCCTTGGGACATCATTTACAAGGCTAGCGGGAGAAGAGAGGAAGTAAGGTATCTTTTATGGATCAGATTAAGTAGGGTGCGAAAAGTCACTGATTTCTTTCGGAATATGGAGAGGAACATACGTATAAACTACATGTTCACTAGGATTGTCAAGCTTATTGTTGTTGAACTCTATTGCACACATACAGCTGCCTGCATCTTTTACTATTTGGCTACAACTCTTCCATCTTCTGAAGAAGGATACACCTGGATAGGAAGCCTAAAGTTGGGAGACTACAGTTACTCAAATTTCAGAGATATTGATATATGGAAACGCTATATAACATCCTTATATTTTGCCATAGTAACCATGGCCACAGTCGGTTATGGTGAGATACATGCAGTTAATATGAGGGAAATGATATTTGTAATGATATATGTCTCTTTTGACATGATTCTTGGGGCTTATTTGATTGGTAACATGACAGCCTTGATTGTTAAAGGTTCAAAAACTGAAAAGTTCAGAGATAAAATGACGGATCTCATCAAATACATGAATCGAAACAGGCTTGGAAGAGACATCCGTAATCAGATTAAAGGTCATGTACGTTTACAGTACGAGAGTAGCTACACCGAAGCTTCTGTTCTTCAGGACATCCCCATTTCTATCCGCGCTAAGATTTCACAAACATTATACTTGCCTTACATTGAGAATGTTTCTCTCTTCAAGGGATGCTCAACCGAGTTCATCAATCAAATAGTTTTAAGACTCCACGAAGAGTTTTTTCTCCCTGGAGAAGTGATACTGGAACAGGGAAATGTCGTAGATCAACTTTATTTTATCTGTCATGGTAAATTGGAGGAACTGGGCATAGGAGAAGATGGATCAGAAGAAACTATTTCAGTACTAGAACCCAACAACTTATTTGGAGAGATTTCTATTCTTTGCAATATTCCTCAACCCTATGCAGTTCGCGTCAGTGAATTATGTCGGCTTCTGAGGCTTGACAAGCAGTCTTTTATGAATATTCTTGATATATACTTTTACGATGGCCGGAAAATCTTGAGCAATCTTCTAGAAGGAAAAGAATCTAGTCTCCGAGTCAAGCAGTTGGAATCAGATATTACATTTCACATTGGAAAGCAAGAAGCAGAACTTGCTTTAAAGGTGAATAGTGCAGCTTACCATGGAGATTTGTACCAGCTCAAAGGTTTGATCCGAGCAGGAGCCAATCCGAACAAGAAAGATTACGACGGAAGGTCACCATTGCACCTTGCAGCATCAAGAGGGTATGAAGATATTGCAATTTTTCTCATTCAGGAAGGAGTAGACACCAACATAATAGATAAATTTGGAACCACGCCCTTACTTGAAGCCATAAAATATGGGCACGATCGAATTGTGGCTTTACTTGTCCAACAAGGTGCTTCTTTAAAGATAGAAGAAGCTGGGACCTTTCTTTGTACAGCCGTTGCAAGGGGGGATTCAGATTTCCTTAAAAGAGTGTTGGCCAATGGAATAGACCCAAACTCAAAAGATTATGATTATCGAACTCCGCTCCATGTGGCGGCTTCTGAAGGATTGTATCCGATGGCTAAGCTGCTGATAGAAGCTGGGGCCAGTGTCTTTTCAAAAGACAGATGGGGAAATACCCCTCTAGATGAGGCCAGGACGGTTGGAAACATGAACTTGATCAAACTATTGGAAGAAGAGAAGACCTTTCAGCTCTCTCCATCATCATCCTCTCATCAAACCCAAGAAGTCACTGATAAGAAGCATTCAAGACAATGCACTGTGTTCCCTTTCCACCCTTGGGATCCTAAAGAAAATAGAAGATCGGGGATTGTGTTATGGGTTCCACAAACCATTCAAGAGCTTATTGAAGCAGCCATCGAGCAGCTTGAGCTTAAGAGCGGGACTTGTCTATTAACAGAAGATGGGGGTAAAATTCTTGATGTTGACATGATTAATGACAATCAAAAGCTGTATCTAGGCAATGAAACAAATTAG | 2526 | 41.29 | MTNPEAEEREYEVEEMRERIKSSRGSRFNLIENELRTESTQRKFCRESFINGIQDLSTGLVIHPENRWYSAWINFILIWAVYSSFFTPMEFGFFRGLPENLFILDIAGQITFFLDIVLQFFVAYRDSQTYIMIHKRTPIALRSVFSFPSLFLPQYTIFHVCQLFRYLKSGFVIDFLGCMPWDIIYKASGRREEVRYLLWIRLSRVRKVTDFFRNMERNIRINYMFTRIVKLIVVELYCTHTAACIFYYLATTLPSSEEGYTWIGSLKLGDYSYSNFRDIDIWKRYITSLYFAIVTMATVGYGEIHAVNMREMIFVMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLIKYMNRNRLGRDIRNQIKGHVRLQYESSYTEASVLQDIPISIRAKISQTLYLPYIENVSLFKGCSTEFINQIVLRLHEEFFLPGEVILEQGNVVDQLYFICHGKLEELGIGEDGSEETISVLEPNNLFGEISILCNIPQPYAVRVSELCRLLRLDKQSFMNILDIYFYDGRKILSNLLEGKESSLRVKQLESDITFHIGKQEAELALKVNSAAYHGDLYQLKGLIRAGANPNKKDYDGRSPLHLAASRGYEDIAIFLIQEGVDTNIIDKFGTTPLLEAIKYGHDRIVALLVQQGASLKIEEAGTFLCTAVARGDSDFLKRVLANGIDPNSKDYDYRTPLHVAASEGLYPMAKLLIEAGASVFSKDRWGNTPLDEARTVGNMNLIKLLEEEKTFQLSPSSSSHQTQEVTDKKHSRQCTVFPFHPWDPKENRRSGIVLWVPQTIQELIEAAIEQLELKSGTCLLTEDGGKILDVDMINDNQKLYLGNETN | 841 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 5596545 | 5602912 | + | BLOR08963 | Blo18g00475 | 73779 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo18g00475 | 841 | ProSiteProfiles | Ankyrin repeat region circular profile. | 590 | 622 | - | - | |
Blo18g00475 | 841 | ProSiteProfiles | KHA domain profile. | 768 | 841 | IPR021789 | - | |
Blo18g00475 | 841 | ProSiteProfiles | Ankyrin repeat profile. | 623 | 655 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | ProSiteProfiles | Ankyrin repeat profile. | 590 | 622 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | Gene3D | - | 547 | 655 | IPR036770 | - | |
Blo18g00475 | 841 | Pfam | KHA, dimerisation domain of potassium ion channel | 768 | 836 | IPR021789 | - | |
Blo18g00475 | 841 | PRINTS | Ankyrin repeat signature | 703 | 717 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | PRINTS | Ankyrin repeat signature | 591 | 606 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 413 | 533 | IPR000595 | - | |
Blo18g00475 | 841 | ProSiteProfiles | Ankyrin repeat region circular profile. | 623 | 654 | - | - | |
Blo18g00475 | 841 | Pfam | Cyclic nucleotide-binding domain | 433 | 517 | IPR000595 | - | |
Blo18g00475 | 841 | PANTHER | POTASSIUM CHANNEL SKOR-LIKE | 164 | 840 | - | - | |
Blo18g00475 | 841 | SMART | ANK_2a | 720 | 752 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | SMART | ANK_2a | 687 | 716 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | SMART | ANK_2a | 654 | 683 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | SMART | ANK_2a | 623 | 652 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | SMART | ANK_2a | 590 | 619 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | CDD | CAP_ED | 413 | 527 | IPR000595 | - | |
Blo18g00475 | 841 | SUPERFAMILY | Ankyrin repeat | 563 | 741 | IPR036770 | - | |
Blo18g00475 | 841 | PANTHER | POTASSIUM CHANNEL AKT1 | 7 | 146 | IPR045319 | GO:0005249|GO:0006813 | |
Blo18g00475 | 841 | PANTHER | POTASSIUM CHANNEL AKT1 | 164 | 840 | IPR045319 | GO:0005249|GO:0006813 | |
Blo18g00475 | 841 | SUPERFAMILY | Voltage-gated potassium channels | 64 | 338 | - | - | |
Blo18g00475 | 841 | PRINTS | EAG/ELK/ERG potassium channel family signature | 329 | 338 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Blo18g00475 | 841 | PRINTS | EAG/ELK/ERG potassium channel family signature | 237 | 247 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Blo18g00475 | 841 | PRINTS | EAG/ELK/ERG potassium channel family signature | 105 | 115 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Blo18g00475 | 841 | PRINTS | EAG/ELK/ERG potassium channel family signature | 285 | 302 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Blo18g00475 | 841 | Pfam | Ion transport protein | 70 | 338 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Blo18g00475 | 841 | Pfam | Ankyrin repeats (many copies) | 675 | 728 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | ProSiteProfiles | Ankyrin repeat profile. | 687 | 719 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | Pfam | Ankyrin repeats (3 copies) | 565 | 652 | IPR002110 | GO:0005515 | |
Blo18g00475 | 841 | Gene3D | - | 656 | 749 | IPR036770 | - | |
Blo18g00475 | 841 | Gene3D | Jelly Rolls | 397 | 535 | IPR014710 | - | |
Blo18g00475 | 841 | Gene3D | - | 71 | 339 | - | - | |
Blo18g00475 | 841 | SMART | cnmp_10 | 413 | 531 | IPR000595 | - | |
Blo18g00475 | 841 | Gene3D | Helix hairpin bin | 340 | 396 | - | - | |
Blo18g00475 | 841 | ProSiteProfiles | Ankyrin repeat region circular profile. | 687 | 719 | - | - | |
Blo18g00475 | 841 | PANTHER | POTASSIUM CHANNEL SKOR-LIKE | 7 | 146 | - | - | |
Blo18g00475 | 841 | SUPERFAMILY | cAMP-binding domain-like | 341 | 530 | IPR018490 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo18g00475 | Blo-Chr18:5596545 | Blo12g01092 | Blo-Chr12:28596716 | 8.56E-77 | dispersed | |
Blo11g00625 | Blo-Chr11:6414502 | Blo18g00475 | Blo-Chr18:5596545 | 1.64E-11 | transposed | |
Blo17g00470 | Blo-Chr17:6596870 | Blo18g00475 | Blo-Chr18:5596545 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo18g00475 | K21867 | - | gmx:100797927 | 1305.04 |