Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00485 ATGGTGCTCTCCAGAGCTGCATCTCAAAGCGATGTCTCCGTCCACTCTACCTTCGCCTCCCGATACGTCAGAACTTCTCTTCCGAGGTTCCGAATGCCAGAAAATTCGATCCCGAAGGAGGCGGCGTACCAGATAATCAACGACGAGCTGATGCTGGACGGAAATCCGAGGCTGAATCTGGCGTCGTTCGTGACGACGTGGATGGAGCCGGAGTGCGACAAGCTGATCATGTCCTCCATTAATAAGAACTATGTTGACATGGATGAATACCCGGTGACCACTGAGCTTCAGGCACTGAAATGGGGATGGTTTTGGTGGATGCAGAATCGGTGTGTGAACATTATAGCTCACCTTTTCAATGCGCCGCTTGGAGAGTCAGAGACGGCGGTGGGCGTCGGAACGGTGGGGTCGTCGGAGGCCATCATGCTTGCCGGCTTGGCTTTCAAGCGAAAATGGCAGAACAGAAGGAAAGCAGAGGGCAAGCCCTGTGATAAGCCCAACATCGTCACCGGAGCTAATGTCCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAGGAGGTGAAGCTGAGGGAAGGGTATTATGTAATGGACCCAAAGAAAGCGGTGGAGATGGTCGACGAGAACACCATCTGCGTCGCTGCAATTCTGGGTTCTACTCTCAACGGAGAATTCGAAGACGTCAAACTCTTGAACGACCTCTTGATCCAGAAAAACAAGCAAACTGGATGGGATACTCCTATTCACGTAGATGCTGCAAGCGGAGGGTTCATTGCTCCATTTCTTTACCCAGAGCTTGAGTGGGACTTCAGGCTGCCATTGGTGAAGAGCATCAATGTCAGCGGCCATAAATACGGACTCGTTTATGCCGGAATCGGATGGGTTATTTGGAGAAGCAAAGAGGATTTGCCTGAAGAACTTATTTTCCATATCAACTATCTTGGAGCAGATCAACCTACTTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCCCAGTATTACCAGCTTATTCGCTTAGGATATGAGGGATATAGAAATGTCATGGAAAATTGCCGAGAAAACGCGATAGTACTCAGAGAAGGACTGGAAAATACAGATCGTTTCACCATAGTCTCCAAAGATGACGGAGTCCCACTGGTCGCCTTCTCTCTCAAAGACAACAGCTGCCACAACGAGTTTGAAATCTCCGAAATGTTGAGGCGCTTTGGGTGGATAGTCCCGGCCTACACCATGCCAGCCGACGCACAACACATAACAGTCCTCCGGGTCGTAATACGCGAAGATTTTTCTCGCACACTCGCTGAACGCCTGGTCTTTGATATAGAAAAAGTTTTGCACGAACTTGACACCCTTCCAGCTCGAGTGGTTACGACTAAGTTAGAAGCCACTAAATTAGACACCAGTACAGAAGCGGCCCCGGAGGGTGCAACTGTAACTGTGACCATTAAGAAGAGCGACGAGCAGGTCGAGAGGGAGGTGTCGACGATTTGGAAGAAGTTTGTGGCTAATAGGAAGAAGAAGAATGGTGTCTGTTAG 1557 49.45 MVLSRAASQSDVSVHSTFASRYVRTSLPRFRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQALKWGWFWWMQNRCVNIIAHLFNAPLGESETAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPKKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIQKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRENAIVLREGLENTDRFTIVSKDDGVPLVAFSLKDNSCHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVFDIEKVLHELDTLPARVVTTKLEATKLDTSTEAAPEGATVTVTIKKSDEQVEREVSTIWKKFVANRKKKNGVC 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5852115 5861395 - BLOR08973 Blo18g00485 73789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00485 518 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 392 IPR002129 GO:0016830|GO:0019752|GO:0030170
Blo18g00485 518 Gene3D - 372 459 - -
Blo18g00485 518 PANTHER GLUTAMATE DECARBOXYLASE 1 518 IPR010107 GO:0004351|GO:0006536|GO:0030170
Blo18g00485 518 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 455 IPR010107 GO:0004351|GO:0006536|GO:0030170
Blo18g00485 518 SUPERFAMILY PLP-dependent transferases 15 455 IPR015424 -
Blo18g00485 518 Gene3D - 66 371 IPR015421 GO:0003824
Blo18g00485 518 Gene3D - 1 65 - -
Blo18g00485 518 PANTHER GLUTAMATE DECARBOXYLASE 1 518 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00034 Blo-Chr15:266765 Blo18g00485 Blo-Chr18:5852115 0 transposed
Blo17g00126 Blo-Chr17:1161328 Blo18g00485 Blo-Chr18:5852115 3.94E-07 transposed
Blo10g00220 Blo-Chr10:2824461 Blo18g00485 Blo-Chr18:5852115 0 wgd
Blo17g00478 Blo-Chr17:6793866 Blo18g00485 Blo-Chr18:5852115 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00485 K01580 - pvy:116131519 892.493