Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00515 ATGCTTCTGCGAACACGTATCTTCCGCAAAACTGAGTGTATCCGTGAACACCTATGCTTTTATAGACCCAAACATTTTTACGAACATGTGTTCACTGCGAAAACACTCCTCTCGGAGACACCAGTGTACTATGGAAGCCTAGGCTTCTGCAAATACGTGGATTCTTCAGAAGTTGCCTTCCACAAACATGCACGTTTCTATGGAAACCTTTCTTCCATGGACACAAATAGTCTGCTACCTACATTGATGAAGCTCTGGCATAACCCTGCGAGGAGGAACGCCACATTATGCTGGTTCTCGTCTCCAAACAGCTCGAACCTCCACACACACTCCAAACCAATTCCATACACCAAGACATACCATCAGGTTGTGGCTGTGAAGCAGCTAGATAGAAATGGTCTACAAGGAAATAAGGAGTTTCTTGTTGAGGTTCTCATGTTAAGCCTCTTACACCATCCTAACTTGGTCAACCTCGTCGGATATTGCGCCGACGGCGATCAACGGCTTCTTGTTTATGAGTTCATGGCCAATGGATCTCTCGAGGATCATCTTCTAGAGATACAAGACAAAGAGAAGGCATTGGATTGGTACACGAGAATAAAGATAGCATCAGGGGCGGCAAGAGGACTTGAATATCTACACAACAAGGCCGATCCACCAGTAATATACAGGGATCTGAAGTCCTCAAACATCTTGTTAGACCACGATTACAACCCCAAGTTATCGGATTTTGGACTGGCAAAGCTTGGCCTGACTAGCGACAAAATGCAGGTGTCCTCCAGGATTATTGGAACATACGGTTATTGTGCCCCCGAATACGCGAGGACCAAAGATCTCACTTTGAAATCCGACGTGTACAGCTTTGGCGTAATTTTGCTTGAGCTCATTACAGGGAGAAGAGCGATTGACACGACTCGGCCAAGTAGTGAGCAAAATCTTGTTGGTTGGGCACAACCATTATTCAGAGATCCTAAGAAGTACCCGGAAATGGTAGACCCACAACTCAAAGGAAACTTCCCAGAAAAAGACCTGAATCAAGCGGTCGCCATAGCGGCCATGTGCCTCCAGGAAGAAGCTTCAGCCCGTCCATTAATAAGCGACGTCGTCATCGCGCTCAGCTTCCTCTCCTCCTCTCCTGACCACCTTCCTCATGAAGAAGACAAGAATTCAGACTCCTCAAACGGAGAAGAAGATGAAGCAGAAAAAGACGGCGAAGAAGAAGCTGCTAAAAGCGACGTTGAAATGCAAGAGGGTTGTCAGTGCTCGCCTAGCTCCGGCAAGAGCAGTTGTAGGTCGGAGAACGAGAGCTTCTCTTCAACCCACGCAAGAAGGAGCAGTAAAGTACCGGAGGACGCCATGTTTGTAAGCAGGAACAGCAGTTTGAACAGCAGAAAGTCTGTCTTCAATGGAGGATCAGTGGTGAGCCATGGCACTAGTAAAGCTGATTCTGATCGTCACGAAAATGGAAGCAGCTGGGGATCGGAGGAAGAGCGTGGGTAG 1500 47.47 MLLRTRIFRKTECIREHLCFYRPKHFYEHVFTAKTLLSETPVYYGSLGFCKYVDSSEVAFHKHARFYGNLSSMDTNSLLPTLMKLWHNPARRNATLCWFSSPNSSNLHTHSKPIPYTKTYHQVVAVKQLDRNGLQGNKEFLVEVLMLSLLHHPNLVNLVGYCADGDQRLLVYEFMANGSLEDHLLEIQDKEKALDWYTRIKIASGAARGLEYLHNKADPPVIYRDLKSSNILLDHDYNPKLSDFGLAKLGLTSDKMQVSSRIIGTYGYCAPEYARTKDLTLKSDVYSFGVILLELITGRRAIDTTRPSSEQNLVGWAQPLFRDPKKYPEMVDPQLKGNFPEKDLNQAVAIAAMCLQEEASARPLISDVVIALSFLSSSPDHLPHEEDKNSDSSNGEEDEAEKDGEEEAAKSDVEMQEGCQCSPSSGKSSCRSENESFSSTHARRSSKVPEDAMFVSRNSSLNSRKSVFNGGSVVSHGTSKADSDRHENGSSWGSEEERG 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6545510 6550458 + BLOR09003 Blo18g00515 73819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00515 499 MobiDBLite consensus disorder prediction 452 478 - -
Blo18g00515 499 MobiDBLite consensus disorder prediction 479 499 - -
Blo18g00515 499 ProSiteProfiles Protein kinase domain profile. 67 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00515 499 Pfam Protein kinase domain 118 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00515 499 Gene3D Transferase(Phosphotransferase) domain 1 176 400 - -
Blo18g00515 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Blo18g00515 499 SUPERFAMILY Protein kinase-like (PK-like) 121 375 IPR011009 -
Blo18g00515 499 MobiDBLite consensus disorder prediction 417 436 - -
Blo18g00515 499 PANTHER RECEPTOR-LIKE KINASE LIP1 122 453 - -
Blo18g00515 499 MobiDBLite consensus disorder prediction 379 499 - -
Blo18g00515 499 CDD STKc_IRAK 122 369 - -
Blo18g00515 499 PANTHER OS07G0668900 PROTEIN 122 453 - -
Blo18g00515 499 Gene3D Phosphorylase Kinase; domain 1 116 175 - -
Blo18g00515 499 SMART serkin_6 116 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00515 Blo-Chr18:6545510 Blo06g00366 Blo-Chr6:21673337 3.58E-139 dispersed
Blo18g00515 Blo-Chr18:6545510 Blo07g00911 Blo-Chr7:28059265 4.97E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84826 PF00069 Pkinase 3.50E-41 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00515 - - psom:113331076 429.098