Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00520 ATGGGCATCCAAATGGAGAAGACTTCATTTAAACTCTATGAATCTTCAACCTTTATGCCATTAAGAAGTCTTGATCCACGTTCAGTTCAAAGGGCAGAAGCAAGACCTCCTTACCAATGCCGGAGTATTGCAACAACTGTTGGTTTCGTTGAATCCAATTCACAAGATCCTCCCCCAAGTGTTCTTGATGTACCACCCCACATTAAATTTAAAAGACTTGATAAAACTGCCAAGCATATAATGCAGGCATGCAATTTTCAAGCGTCAAAGTATTATTATCTCAAATATAAGGAAGCTGTTGAAGAGGTGAAGTCACAGAGAGATATACCTGATATAAAACCTGGTTACATAGTGCAACTCAAAGTGGAAGTACCAGAGAACAAACGTCGTGCCTCAATTTTGAAAGGCATCGTAATAGCTAGACGAAATGCTGGATTGAATACTACTTTTAGGATTAGGAGACTAGTTGCTGGGGTTGGAGTCGAGTCCATGTTTCCGCTGTTTGGCTGTAATAACTGTGATGCTCGTTACAACCTGCCTCGTGGCTCTGGTAATCGTCTTATGCTGGCACAAGAGTATTTACCTCGCCATTGCCTTCCACTGTTCTTCAGCTCTGTCGAAGCCCTCTACTTTTCTGCCACTGTGATCAAGTTTCTCGAAGGAGCTTGGGTCCCCGTCGCCCTATCCTTCATCTTCCTCATCGTAATCTACGTTTGGCACTACGGAACGCTGAAAAAGTATGAATTTGATGTTCAGAATAAGGCTTCCATCAATTGGCTTCTCTGTTTGGGTCCGAATCTGGGCATTGTTAGTGTTCGAGGAATCTGCCTTGTTCATACCGAGCTAGTCTGTGGATTACCTGCGATTTTCTCACACTTTGTCACAAACCTCCCTGCTTTTCACCAGGTCGTCGTCTTTCTCTGCATCAAATCTGCTCCGGTTCCTCACGTTAGACCAGAGGAGAGGTTTCTCGTAGGAAGAATCGGCCCTAAAGGATACCGGATTTACAGATACATAGCGAGGTACGGTTATCACGACGTTCACAGAGACGATATAGAGTTCGAAAAGGACCTAATTTGCAGCATCGTCCACTTCATTCGATCGGAGAGACAGGAATTCATCAGCGGAACAGGAGAAAAGGAAGAAAATGAAAGAATGGCAGTGGTGGGAACACGTTCGTCGAACTGCGACGGGATAAGACTGTGGGAGGACGAGATTACCAGTTTTAGGTTACCAGTTTTAGATTACATGTTCGTCAAACTAACCTCGTACTTTTAG 1278 44.05 MGIQMEKTSFKLYESSTFMPLRSLDPRSVQRAEARPPYQCRSIATTVGFVESNSQDPPPSVLDVPPHIKFKRLDKTAKHIMQACNFQASKYYYLKYKEAVEEVKSQRDIPDIKPGYIVQLKVEVPENKRRASILKGIVIARRNAGLNTTFRIRRLVAGVGVESMFPLFGCNNCDARYNLPRGSGNRLMLAQEYLPRHCLPLFFSSVEALYFSATVIKFLEGAWVPVALSFIFLIVIYVWHYGTLKKYEFDVQNKASINWLLCLGPNLGIVSVRGICLVHTELVCGLPAIFSHFVTNLPAFHQVVVFLCIKSAPVPHVRPEERFLVGRIGPKGYRIYRYIARYGYHDVHRDDIEFEKDLICSIVHFIRSERQEFISGTGEKEENERMAVVGTRSSNCDGIRLWEDEITSFRLPVLDYMFVKLTSYF 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6652542 6659443 - BLOR09008 Blo18g00520 73824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00520 425 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 198 406 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo18g00520 425 Gene3D - 76 171 IPR038657 -
Blo18g00520 425 SUPERFAMILY Translation proteins SH3-like domain 91 168 IPR008991 -
Blo18g00520 425 PANTHER POTASSIUM TRANSPORTER 6 198 406 - -
Blo18g00520 425 Pfam K+ potassium transporter 199 346 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo18g00520 425 Pfam Ribosomal protein L19 98 168 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00149 Blo-Chr13:4735728 Blo18g00520 Blo-Chr18:6652542 5.89E-37 dispersed
Blo18g00520 Blo-Chr18:6652542 Blo11g00671 Blo-Chr11:7429037 8.03E-100 dispersed
Blo18g00520 Blo-Chr18:6652542 Blo16g01154 Blo-Chr16:40057157 1.58E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00520 K03549 - cit:102627813 329.331