Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00545 ATGGAGCGGGAGCTTCAGAGTCCGGAGCTGGGTAAAGCCGCCACTTTAGAAGGGAGCAGCAGAGGTAGCGGTGGGTCGGATCGTTTCGGGTTGGCCCGAGATCTTGTCACCGACTGTGGCGTCCATAGGAAGAAGAGGATGGCCAGGCAGAGACGATCCTCCGTTCTCAACTTACATCTCTCCTTCTCTTCCTCCAGCTCTCACGTGCCAACCTCTTCAGTCACCCACCTCCCTCCCTCTCTTCCACCCCCACCTGCACGTGTAATTGATCCGAGGCAGCTGAGATTCCTTTTTCAGAAGGAGCTCAAAAACAGTGATGTCAGCTCTCTCAAAAGAATGATACTCCCAAAGAAAGCAGCTGAGACTCATCTTCCTGTTCTTGAATCAAAGGAAGGCATTCTTATCAACATGGATGACTTGGATGGTCTTCACGTTTGGAGCTTCAAGTATAGCAGGTTTTGGCCTAACAACAACAGCAGAATGTATGTGCTCGAAAACACCGGGGACTTTGTTAACACCCATGATTTACAGCTAGGAGACCTCATCTTAGTCTACCAAGATGTTCAAAATCAAAATTATGTAATTCAAGCGAAAAAGACTTCGGACGAAGAAATATATGGCGACATAACCGGAAGCAACAACAGTGTCAATCCGAATGAAGAGTTACTTTTTAACGACAATTTGGAGTTTATGAACAAGCCCTCTAACGCTTTCTTTTCGGTGAATTGGCCCTCCCTTGACGATGATCAAGGCATGTCCTTCGTCTATGACACAACGACCTTCTCAAATGACTATCTTTTGGACTTTCTGGGTGGGCCTATGACCAGCTACTCCAGACCAGTGGCGACTCCGGAAGGGTTTGGGTCGGTCGAAAACTTGTCTCTTGATGATTTCTATGGCTTTTAA 906 47.35 MERELQSPELGKAATLEGSSRGSGGSDRFGLARDLVTDCGVHRKKRMARQRRSSVLNLHLSFSSSSSHVPTSSVTHLPPSLPPPPARVIDPRQLRFLFQKELKNSDVSSLKRMILPKKAAETHLPVLESKEGILINMDDLDGLHVWSFKYSRFWPNNNSRMYVLENTGDFVNTHDLQLGDLILVYQDVQNQNYVIQAKKTSDEEIYGDITGSNNSVNPNEELLFNDNLEFMNKPSNAFFSVNWPSLDDDQGMSFVYDTTTFSNDYLLDFLGGPMTSYSRPVATPEGFGSVENLSLDDFYGF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7632504 7634639 - BLOR09033 Blo18g00545 73849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00545 301 SMART B3_2 98 201 IPR003340 GO:0003677
Blo18g00545 301 CDD B3_DNA 96 199 IPR003340 GO:0003677
Blo18g00545 301 ProSiteProfiles B3 DNA-binding domain profile. 98 201 IPR003340 GO:0003677
Blo18g00545 301 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 42 299 - -
Blo18g00545 301 Pfam B3 DNA binding domain 98 196 IPR003340 GO:0003677
Blo18g00545 301 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 42 299 IPR044800 GO:0003700
Blo18g00545 301 Gene3D - 94 209 IPR015300 -
Blo18g00545 301 SUPERFAMILY DNA-binding pseudobarrel domain 96 195 IPR015300 -
Blo18g00545 301 MobiDBLite consensus disorder prediction 1 29 - -
Blo18g00545 301 MobiDBLite consensus disorder prediction 63 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00204 Blo-Chr2:1864512 Blo18g00545 Blo-Chr18:7632504 7.24E-34 dispersed
Blo07g01062 Blo-Chr7:30474638 Blo18g00545 Blo-Chr18:7632504 3.62E-17 dispersed
Blo14g00364 Blo-Chr14:3958679 Blo18g00545 Blo-Chr18:7632504 1.27E-15 dispersed
Blo14g00398 Blo-Chr14:4314134 Blo18g00545 Blo-Chr18:7632504 1.91E-26 dispersed
Blo18g00545 Blo-Chr18:7632504 Blo08g00183 Blo-Chr8:2085505 1.58E-17 dispersed
Blo18g00545 Blo-Chr18:7632504 Blo10g00609 Blo-Chr10:18598301 6.57E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13600 PF02362 B3 1.20E-14 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00545 - - jre:109001833 312.768