Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00547 ATGGCGTTCTCGGAAAACTCCTTCCGTCAGTCTCTTATCCCCGGATTCCTCTACTCTACCTCTTCCTCTACCAAATCCATAGCCGTCGAGAAAATGCTCCGGAATAGCCCTAGCGGATTCTCTTCCCCCTCTCCTGCTGCCGATTCTCTTCCGTCGTCGAAGAGCAGCTTTGTGATTTCGTCTCCTAGCGAGCAGAGCATGAAGATCGAGATGTACTCCCCGGCCTTCTACGCTGCGTGTACTGCTGGTGGAATCCTTAGCTGCGGTCTTACGCATATGACCGTCACTCCTCTTGACCTTGTTAAATGTAATATGCAGATCGACCCAGTAAAATACAAAAGCATTTCATCTGGATTTGGGGTCTTGCTCAAGGAGCAGGGAGTTAGGGGCTTCTTTAGGGGTTGGGTGCCTACCCTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTCTATGAATTTTTTAAGAAATACTACTCAGATATTGCTGGACCAGAATATGCCGCGAAGTATAAGACCTTGATTTATCTAGCTGGATCAGCATCTGCGGAGGTGATAGCAGATATTGCCCTTTGTCCCTTTGAAGCTGTGAAAGTCCGGGTTCAAACTCAACCTGGTTTTGCCAGAGGTCTGTCAGACGGCCTTCCTAAATTTGTCAGATCTGAAGGCACTCTTGGGTTGTATAAGGGTCTTGTTCCTCTGTGGGGACGTCAGATTCCATATACAATGATGAAGTTTGCATCCTTCGAAACTATAGTGGAGTTGATCTATAAGCACGCTATTCCAACACCCAAGGACCAGTGCAGCAAAAATCTACAGCTTGGTGTTAGTTTTGCTGGCGGCTACGTAGCTGGTGTTTTTTGTGCAATTGTTTCTCATCCTGCTGATAACCTTGTTTCTTTTCTCAACAATGCCAAAGGGGCAACTGTCGGTGATGCGGTGAAGAAACTTGGTTTATTGGGTCTTTTTACCCGGGGGCTTCCCCTCCGTATCGTCATGATTGGAACACTCACTGGAGCTCAGTGGGGTATTTACGATGCATTCAAAGTTTTTGTGGGACTGCCAACTACTGGCGGTGTAACTCCTGCTCCAGCTGCTGCCGCAGCAGAACTTGCGAAAGCTTAG 1128 47.96 MAFSENSFRQSLIPGFLYSTSSSTKSIAVEKMLRNSPSGFSSPSPAADSLPSSKSSFVISSPSEQSMKIEMYSPAFYAACTAGGILSCGLTHMTVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKDQCSKNLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPAPAAAAAELAKA 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7718366 7720866 - BLOR09035 Blo18g00547 73851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00547 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Blo18g00547 375 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 369 IPR044677 GO:0005315|GO:1990547
Blo18g00547 375 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 369 - -
Blo18g00547 375 Gene3D Mitochondrial carrier domain 75 352 IPR023395 -
Blo18g00547 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Blo18g00547 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Blo18g00547 375 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Blo18g00547 375 Pfam Mitochondrial carrier protein 176 260 IPR018108 -
Blo18g00547 375 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00771 Blo-Chr16:32017137 Blo18g00547 Blo-Chr18:7718366 0 dispersed
Blo18g00547 Blo-Chr18:7718366 Blo06g00145 Blo-Chr6:5741865 3.23E-11 dispersed
Blo18g00547 Blo-Chr18:7718366 Blo13g00467 Blo-Chr13:25413152 2.97E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00547 K15102 - csv:101221771 595.119