Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00578 ATGAGAGAAGTCTTCTCACAGAGAAGACTTCTCACAGAGAAACGCTTCTCGCAGAGAGAAGCGCTTCTCGTAGAGAAGCACAGGGATCTAGCGACGACCTTCAACCTTCGACTTCGACGAAACTGGACCGCGACGACCTTCGTCTTCGACGCGAGATCCAGCGTCCCAGCTCGTTCTCCTCCGAAGATCCGTCATCCTCCGAACTTCGTTCGTTCGTCGAAGATCTCGAACTGTTCTCCAAGATCCAGCGAGCAGTGCTGCTTGGACGAACGAAGCCTTCGTCTTCGTCCTGCACTCCTGTTGCTCGAGCCCGAGCTGGCGCCTGGCGTCTGGAGAGCTTCAACGACCCGGGCAGAGGGCTGGCTCGACGGGCCAGCCCGCCAGGCTCGAAAGCTCGGGCTCGCCGAGTTCATGAGCCCGGGTGCTCGGGCTCGGCTCAGCCCGTCTACCTGGCACAGGCAAAATCCGCTCGATTACTGTAGCGAGCCGAGCTTGGCTCGGACCGCTACAGTAACGGGCCCTTACCGAGCATTTGATGAGTACGAAGGGATTGAAGTTGCTTGGAATCAGATCAAACTCTATGATTTTCTGAAATGTCCAGAAGATCTTGAGAGGCTCTACAGTGAAATCCATCTCCTAAAAACATTGAAGCACAAAAATATTATGAAATTCTACACTTCTTGGGTCGATACTTCCAATAGGAACATCAATTTTGTCACTGAAATGTTCACTTCTGGAACCCTAAGACAGTATAGGCTTAAGCATAGGAGAGTAAACATTAGAGCCGTGAAGCATTGGTGTAGACAGATCTTGAAAGGGCTTCTCTATCTTCATAGCCATGATCCACCTGTGATTCACAGAGATCTAAAGTGTGATAATATCTTTGTAAATGGAAATCAAGGAGAAGTGAAGATTGGAGATCTTGGCCTTGCCGCGATTCTCCGAAAATCATTTGCCGATCATTGTGTTGGAACTCCGGAATTTATGGCTCCGGAAGTGTACGAAGAAGCATACAATGAATTAGTAGACATCTATTCATTTGGTATGTGCATACTGGAAATGGTAACATTTGAATATCCATACAGTGAATGTACTCACCCTGCTCAGATCTACAAGAAAGTTATTTCTGGAAAAAAACCAGATGGCTTGTACAAAGTGAAGGATCCAGAAGTAAAACAATTTGTCGAGAAATGTTTGGCAACAGTTTCACTTAGGCTATCGGCAAGGGAGCTCTTGAATGACCCTTTTCTCCAAATTGAAGATTGTGAATATGAGTTGAGATACTTGGATTGTGGGTTTAGGGACGCGGGTCTGACGATAAGGCAGCCTTTCTTTGATATAAATGGGAGTAAAAGTACCCTTTGTAATGGAGTTTCAGATGATTATAATTATTTTGATGCTTCGAGCGAATGGGGGTGTTTTCCAGCTGAGGTCGGGCATAGTGGAATCGAGCTTTTTGAGTGTCACGAGGATGGACATTATGAAGATGTCGACATAAGTATTAAAGGGAAGAGGAGAGAAAATGGTGATATCTTTCTGAGGCTAAGAATTACAGATAAAGATGGCCTGATCCGAAACATTTATTTCCCTTTTGATGTTGAGATCGATACTGCGCTCAGCGTAGCAGTTGAAATGGTGGCAGAACTTGATATAATGGACCTAGATGTGACAAGAATAGCAGATATGATTGACAGGGAGATTGCTTCCATGGTTCCCCAATGGAGGCTCGGGCCTAGCATGGACGATTCGATTAATTTTGTCGATCAAACTTTTTGTCAGAATTGTGCTTCGAATCGGACATCATATGGATCTTTAATGGAGTATTTGACGACTAATTCTTCTGGAAAGAACTTGCAGGTTTATCAGTGCTGTAAAAATGGCTGTGCCACTACTCATGGCCGTTTCGAGGAGATTACCTTCCAAGCGACTGATGGCTCCAAGAATGATTTGAAAGAGCCTGCTTTGAATGTGTCGAGCCAATCGAATTGCCTCAATTATCATGAGACTTTGGGCGGCCATGAAAGCTGTGAACCAAACCATTCTGATGAAGAATATGAAGAAACAGATCGGCACATGTCAAAAATCAAAACAAGTACTTGTTCCGGAAGTTATCACGGAGGCTTGGCCGCACCTGAACTGTCCAACAATTTCGAACAAGAAAGCCAGCAAAAATTGAGATGGCTAAAAGCAAATTTTCAGATGAAATTAAGGGCGCTTAGGGATCAGCATCTTAGTCATGATGTCGATAAAGTTGGCGGGAAGTCGCCCATTGCAGAGGGCATGGCTGCTTCTAATGGCTTCTGCAATGCCTCCATAGCTTCTTCAAACTCCATTCATAGGACACTTTCCCTCCCAGTTGATGCTGTCCACTTATGA 2376 45.37 MREVFSQRRLLTEKRFSQREALLVEKHRDLATTFNLRLRRNWTATTFVFDARSSVPARSPPKIRHPPNFVRSSKISNCSPRSSEQCCLDERSLRLRPALLLLEPELAPGVWRASTTRAEGWLDGPARQARKLGLAEFMSPGARARLSPSTWHRQNPLDYCSEPSLARTATVTGPYRAFDEYEGIEVAWNQIKLYDFLKCPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTSNRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSFADHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDGLYKVKDPEVKQFVEKCLATVSLRLSARELLNDPFLQIEDCEYELRYLDCGFRDAGLTIRQPFFDINGSKSTLCNGVSDDYNYFDASSEWGCFPAEVGHSGIELFECHEDGHYEDVDISIKGKRRENGDIFLRLRITDKDGLIRNIYFPFDVEIDTALSVAVEMVAELDIMDLDVTRIADMIDREIASMVPQWRLGPSMDDSINFVDQTFCQNCASNRTSYGSLMEYLTTNSSGKNLQVYQCCKNGCATTHGRFEEITFQATDGSKNDLKEPALNVSSQSNCLNYHETLGGHESCEPNHSDEEYEETDRHMSKIKTSTCSGSYHGGLAAPELSNNFEQESQQKLRWLKANFQMKLRALRDQHLSHDVDKVGGKSPIAEGMAASNGFCNASIASSNSIHRTLSLPVDAVHL 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8400628 8405024 + BLOR09066 Blo18g00578 73882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00578 791 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 175 749 - -
Blo18g00578 791 CDD STKc_WNK 175 417 - -
Blo18g00578 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Blo18g00578 791 Gene3D Phosphorylase Kinase; domain 1 164 241 - -
Blo18g00578 791 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 175 749 - -
Blo18g00578 791 Pfam Protein kinase domain 175 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00578 791 Gene3D Transferase(Phosphotransferase) domain 1 243 422 - -
Blo18g00578 791 ProSiteProfiles Protein kinase domain profile. 132 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00578 791 SUPERFAMILY Protein kinase-like (PK-like) 175 418 IPR011009 -
Blo18g00578 791 SMART serkin_6 175 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00261 Blo-Chr11:2112948 Blo18g00578 Blo-Chr18:8400628 1.64E-09 dispersed
Blo12g00329 Blo-Chr12:18887379 Blo18g00578 Blo-Chr18:8400628 0 dispersed
Blo13g01016 Blo-Chr13:32507392 Blo18g00578 Blo-Chr18:8400628 2.13E-140 dispersed
Blo16g00483 Blo-Chr16:19050196 Blo18g00578 Blo-Chr18:8400628 6.41E-144 dispersed
Blo17g00594 Blo-Chr17:11584084 Blo18g00578 Blo-Chr18:8400628 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84827 PF00069 Pkinase 4.60E-45 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00578 K08867 - zju:107412222 826.239