Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00584 CCACACCTTCTAATAGAGAAGGGTACTCAAATGTCTCCAATGTTGAGCTATGTACTATCAAGATTGCAAATGTTATCCACTTCCGATCATTCCTCTATTGTGTCCATGAATTTATTTGTGGCGCTACTTTGTGGTTGTATTGTGATTGGTCATCTTCTTGAGGAGAATCGGTGGATGAATGAGTCAATTACGGCTCTCTTGATTGGACTAAGCACTGGAGTTGTCATTTTGCTCGTCAGTAGGGGGAAAAATTCACATTTACTAGTCTTCAGTGAAGATCTTTTCTTTATATATCTCCTGCCACCTATTATATTCAATGCCGGGTTCCAGGTGAAAAAAAAGCAGTTTTTCAGAAACTTTATTACAATTATGCTCTTTGGGGCAATTGGTACATTAATCTCTTGTTGCGTCATTTCATTAGGTGTTATACAATTTTTTAAGAAATTGGATATCGGATCACTGGACATTGGAGATTATTTAGCAATTGGTGCAATTTTTGCTGCAACGGATTCGGTATGCACGTTGCAGATTTTGAATCAGGATGAGACACCTTTACTCTACAGTCTTGTATTTGGAGAGGGTGTGGTAAATGATGCTACATCAGTGGTGCTATTCAATGCAATCCAGAGCTTTGATCTCACCAATATTGATTCCAGGATTGCATTACAATTTATTGGCAGCTTCTTTTACTTATTTTTTACAAGCACTATTCTGGGTGTGATGACCGGTTTGCTAAGTGCTTTCATTATCAAAAAGCTATATTTTGGCAGGCATTCTACAGACCGCGAGGTTGCTTTAATGATATTAATGGCATACCTTTCATATATGATGGCTGAATTGTTCTATTTAAGTGGCATTCTCACGGTGTTCTTTTGCGGGATCGTGATGTCACATTACACCTGGCACAATGTCACTGAAAGTTCACGAGTTACCACAAAGCATGCTTTTGCTACATTGTCATTTGTAGCGGAGATCTTTATCTTCCTTTATGTTGGCATGGACGCATTGGACATTGAAAAGTGGAGATTTGTCGGTGACAGTCCTGGAACTTCTTTGGCAGTCAGTTCCATACTTTTAGCTTTGGTTATGGCTGGAAGAGCTGCCTTCGTTTTTCCTTTATCATTTTTGTCCAACTTAGCAAAAAAATCATCAGCTGAGAAAATTAGCTTCAGGCAGCAAGTGATAATTTGGTGGGCTGGTCTGATGAGAGGTGCTGTCTCAATGGCTCTTGCTTATAATCAGTTCACAAGATCAGGACACACTCAATTGCGTGGGAATGCAATCATGATCACAAGCACTATAACAGTCGTTCTCTTCAGCACAGTGTTGTTTGGGTTAATGACCAAGCCTCTCATTAGGTTCTTGTTACCTAATCCGAAACCCACATCGAGCATGGTTTTGTCCGATCCATCCACTCCCAAATCATTTATCATTCCGCTTCTCGGAGGCAGTCAAGATTCCGAAGTCGATACTGGGAGCCAAGAAATTCCCCGTCCGAGCAGTATTCGAGCGCTTTTAACCACTCCAACACACACTGTTCATCGGTACTGGCGTAAATTTGACGATGCTTTTATGCGGCCAGTGTTTGGCGGACGAGGTTTTGTCCCCTTTGTGCCTGGATCGCCAACAGAGAGGAGTGCC 1641 41.38 PHLLIEKGTQMSPMLSYVLSRLQMLSTSDHSSIVSMNLFVALLCGCIVIGHLLEENRWMNESITALLIGLSTGVVILLVSRGKNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLISCCVISLGVIQFFKKLDIGSLDIGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLTNIDSRIALQFIGSFFYLFFTSTILGVMTGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVGDSPGTSLAVSSILLALVMAGRAAFVFPLSFLSNLAKKSSAEKISFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRGNAIMITSTITVVLFSTVLFGLMTKPLIRFLLPNPKPTSSMVLSDPSTPKSFIIPLLGGSQDSEVDTGSQEIPRPSSIRALLTTPTHTVHRYWRKFDDAFMRPVFGGRGFVPFVPGSPTERSA 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8744593 8750086 + BLOR09072 Blo18g00584 73888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00584 547 Gene3D - 156 207 - -
Blo18g00584 547 PRINTS Na+/H+ exchanger signature 163 173 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo18g00584 547 PRINTS Na+/H+ exchanger signature 123 131 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo18g00584 547 PRINTS Na+/H+ exchanger signature 94 105 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo18g00584 547 PRINTS Na+/H+ exchanger signature 108 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo18g00584 547 Pfam Sodium/hydrogen exchanger family 38 452 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo18g00584 547 PANTHER SODIUM/HYDROGEN EXCHANGER 17 546 IPR018422 GO:0006812|GO:0015299|GO:0016021
Blo18g00584 547 PANTHER SODIUM/HYDROGEN EXCHANGER 2 17 546 - -
Blo18g00584 547 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 36 455 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00088 Blo-Chr1:1199412 Blo18g00584 Blo-Chr18:8744593 0 transposed
Blo05g00328 Blo-Chr5:3757500 Blo18g00584 Blo-Chr18:8744593 0 transposed
Blo11g00954 Blo-Chr11:21021981 Blo18g00584 Blo-Chr18:8744593 1.23E-09 transposed
Blo18g00601 Blo-Chr18:9356710 Blo18g00584 Blo-Chr18:8744593 0 transposed
Blo18g00837 Blo-Chr18:24760235 Blo18g00584 Blo-Chr18:8744593 1.08E-06 transposed
Blo17g00606 Blo-Chr17:11984139 Blo18g00584 Blo-Chr18:8744593 8.91E-23 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00584 - - zju:107412105 924.85