Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00629 ATGGGTTATGGGAATGATTCCAGCAAGAAGAAGAGATACACAATCGTGGGTGTTTCGGGTTTGTTACTCGTCGCCATGGTTGTGGCCGTGACAGTTGGAACCAACTTGAGCAGTAGTGATGAGAGCCATATTCCGAGCGAGAATTCTAATGAACTTTCTTCTTCAATGAAAGCCATTAAGTCGATGTGTCAACCCACGACTTACAAAGAAGAATGTGTTGAGAGTCTCCAATCCTCAAACTCGACCGATCCGAAAGAACTCATTCAGGTCGGTTTTAGGGCCGCAATAAAGTACGTCAATGAGGCTGCCAAGAAATCTACAACCTTGAAAGAGATCGAAAAAGACCCGAGGGCCGCCAAGGCACTTGTCAATTGTAAAGAGCTTATGGACTTTGCCATAGGCGAGCTGAAGCACTCATTTAACAAATTAGGCGAATTCGATATTACAAAGCTTGATGAAATGCTCATAGACTTGAGAATTTGGCTTAGTGCTACCATCACATATCAAGAAACTTGCTTGGATGGGTTTGAAAACACCACAAGCAATGCCGGGGAGAAGATGAAATCGGCTTTGAAGACGTCGATGAGGCTAACTAGCAATGGTCTAGCCATGGTCACCGAGATGTCTTCCTTCCTCACCGACTTACTAATTCCAGGGATCAGCCGCAGGCTACTTTCCGACGATATTCCAGTCCTCGGCCACGATGAGTTCCCCGTCTGGGCCAACCTTGGCCTCAGAAGACTCCTCCAGGCTCCGGCTTCAAGCATCAAGGCCGACATCGTCATTGCCAAGGACGGAAGCGGAAAATACAAGACCATCAATGAAGCATTAGTCCACATCCCAAAGTACAGCAATACTACCTTTGTGATTTACATCAAGGAAGGCATTTATAATGAAGTTGTCCATTTCAACAAAACCTTCACTCATTTGGTATTGATCGGTGACGGCCCTACCAAAACCCGCATCACTGGAAGCAGGAACTTCATCGACGGCACCCCGACCTTCAAGACTGCAACAGTTGCTGTGCTTGGAGATTACTTCACTGCGAAGGACATAGGATTTGAAAACACAGCTGGGCCTGAGAAACACCAGGCCGTGGCGTTGAGAGTCCAATCCGATTACTCCATCTTCTACAACTGCGCTATGGATGGTTACCAAGACACTCTGTACGTTCACGCGAAGCGACAATTCTACCGCGATTGTGAGGTCTCCGGTACGATCGATTTCGTCTTCGGCGACGCTGCTGCTGTCTTCCAGAACTGCACGTTCTTAGTCCGGAAGCCATTGGAGAACCAGCAAACAATCGTCACCGCGCAAGGTAGAAAGGACAGGAGACAGCCATCGGCGTTGATCCTCCAGAAGTGTAAGATCACCTCCGCTCCCGATTATGTCCCAGTGCGAAAGCAATTTCGAGCATTCCTCGGCCGCCCGTGGAAGGAGTACTCGAGGACGATCATCATGGAATCGTTCATCGACGATTTGATTCAGCCAGAAGGATGGCTGCCATGGATGGGAGATTTCGGGCTCAGAACCTGCTTCTACACCGAATATAACAACTACGGCCCTGGCTCGGACAAATCACGCCGAGTGAAGTGGCGGGGAATCAAGACGGTTAATCCTGCACACGCACAGAAATTCTCAGCGGGAGCGTTTTTCAAAATTGATAGCTGGATCAAAGCCAATCAACCCGAGCGTGTTCCTCCGATTCCGGCGAGCGGCGATCTCGGATCTGCGACGACAGCTCCGAGGTTGAGCTGTTTTCCGATTCCGGCGACGAACAACTCCGACCCTGTTCGGTGGGTGAGACTATTCGATTTGAGTTTTTGCCTCGATGTTAAGTTCGGATTTGTGATGGCGTTGGTTGATCTGTGTTGTGGGTTTACCGCGACCGATCTGAAGGATTCCGGACGAACAATCTCCGGCAATGGCAGCTTCGGATCTGATTCCGGCAAGAACAGAACCCTCAGTTCTGTTTTGTTCTATTGGGGCTGGTCCAGGGTCACGGTTCAATTGAAAACAAAAAGGGCAAAAAATTTTAATTGGCCCCTGGCCTTCGCTGGCGAACAACAGAGAGGGAGTGAGGGAGATCGAGAGAAGGGAACGATCGGGAAGGATGACGAGGAGCGGCGAATCGGCGATGGCGTGAGGGAGACATCGGCAATGGCTCGGGTGCGGCGTGCGACTCCGGGCTTGGAGCGCTGCTGCAGAGCCGATTTGGCGGGGGTCATAGGTGAAGGTCGGAGGCAGGGCATCGGTCCGAGTCTGTTGGTCCACTCTGGACCAATTTGTTCCAATTGCTTTGACTACTGGATAAGGCTTCCACGCGTCTCTTGCTGGCTGGACCTCCCTCCTTGA 2355 50.57 MGYGNDSSKKKRYTIVGVSGLLLVAMVVAVTVGTNLSSSDESHIPSENSNELSSSMKAIKSMCQPTTYKEECVESLQSSNSTDPKELIQVGFRAAIKYVNEAAKKSTTLKEIEKDPRAAKALVNCKELMDFAIGELKHSFNKLGEFDITKLDEMLIDLRIWLSATITYQETCLDGFENTTSNAGEKMKSALKTSMRLTSNGLAMVTEMSSFLTDLLIPGISRRLLSDDIPVLGHDEFPVWANLGLRRLLQAPASSIKADIVIAKDGSGKYKTINEALVHIPKYSNTTFVIYIKEGIYNEVVHFNKTFTHLVLIGDGPTKTRITGSRNFIDGTPTFKTATVAVLGDYFTAKDIGFENTAGPEKHQAVALRVQSDYSIFYNCAMDGYQDTLYVHAKRQFYRDCEVSGTIDFVFGDAAAVFQNCTFLVRKPLENQQTIVTAQGRKDRRQPSALILQKCKITSAPDYVPVRKQFRAFLGRPWKEYSRTIIMESFIDDLIQPEGWLPWMGDFGLRTCFYTEYNNYGPGSDKSRRVKWRGIKTVNPAHAQKFSAGAFFKIDSWIKANQPERVPPIPASGDLGSATTAPRLSCFPIPATNNSDPVRWVRLFDLSFCLDVKFGFVMALVDLCCGFTATDLKDSGRTISGNGSFGSDSGKNRTLSSVLFYWGWSRVTVQLKTKRAKNFNWPLAFAGEQQRGSEGDREKGTIGKDDEERRIGDGVRETSAMARVRRATPGLERCCRADLAGVIGEGRRQGIGPSLLVHSGPICSNCFDYWIRLPRVSCWLDLPP 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10397379 10410494 - BLOR09117 Blo18g00629 73933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00629 784 CDD PMEI-like_3 61 210 - -
Blo18g00629 784 Pfam Plant invertase/pectin methylesterase inhibitor 58 204 IPR006501 GO:0004857
Blo18g00629 784 PANTHER PECTINESTERASE 14 570 - -
Blo18g00629 784 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 207 IPR006501 GO:0004857
Blo18g00629 784 SUPERFAMILY Pectin lyase-like 256 560 IPR011050 -
Blo18g00629 784 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 209 IPR035513 -
Blo18g00629 784 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Blo18g00629 784 Gene3D - 253 565 IPR012334 -
Blo18g00629 784 Pfam Pectinesterase 259 553 IPR000070 GO:0030599|GO:0042545
Blo18g00629 784 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Blo18g00629 784 SMART PMEI_2 54 204 IPR006501 GO:0004857
Blo18g00629 784 PANTHER PECTINESTERASE 14 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00028 Blo-Chr1:376793 Blo18g00629 Blo-Chr18:10397379 1.51E-06 dispersed
Blo02g00641 Blo-Chr2:14694898 Blo18g00629 Blo-Chr18:10397379 7.72E-07 dispersed
Blo18g00629 Blo-Chr18:10397379 Blo07g00810 Blo-Chr7:25995500 6.31E-140 dispersed
Blo10g00373 Blo-Chr10:6186853 Blo18g00629 Blo-Chr18:10397379 0 wgd
Blo17g00653 Blo-Chr17:15444902 Blo18g00629 Blo-Chr18:10397379 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00629 K01051 - csv:101207393 796.964