Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00633 ATGGCGACGAGGAATAGAACCTTGCTGTTTAAGAAATATAGAGATGCTTTAAAGAGCGTTAGAGTTCCGACGAGCTCTTCCCTTGCGTCTGGTTCGCCGTCGACTTCTGGCGGTGGCGGAGGTGGTCCGGTTATCGAATTGGTCAGTACCTCGCTTTTGCATCCGAATCGATCTTATGCTCCGCTAAGTACGGAGGATCCAGGTTATTCAAGTAAGGGTGCTCTTACTGTTGGTCTACCTCCAGCTTGGGTGGATGTTTCTGAAGAAATATCAACAAGTGTGCAGCGTGCACAGATAAAAATGGCAGAGTTAGCCAAGGCACATGCAAAGGCTTTAATGCCTTCATTTGGGGATGGTAAAGAAGATCAAAGATTAATTGAAGCTCTTACTCAAGAGATTACAGGTCTGATTAAGAAATCAGAGAAGAGACTACAAAGACTTTGTGTAGCAGGACCTTCTGAAGATTCCAATGTCAGAAAAAATGTTCAGCGTTCTCTTGCCACAGACCTTCAAAATCTTTCAATGGAGCTTCGCAAAAAACAATCAACTTACCTCAAGCGGCTCAGGCAGCAAAAGGAGGGTCAAGATGGGATTGACTTGGAGATGAATCTCAATGGAAGTAGATCTATTGCCGAGGATGATGACTTGGATAACATGATATTTAATGAGCATCAGATGGCCAAGCTTAAAAAGAGCGAAGCATTCACAGCAGAAAGAGAAAGAGAAATCCAACAGGCAAGAGAAATGTCTTTATTTACTGCCTTTTTAGTCGTAGAATCTGTAAATGAGCTTGCTCAGATTATGAAGGATCTTTCAGTTCTTGTTATAGACCAGCAGGGCACAATTGTTGATAGGATTGATTACAACATTCAGAATGTGGCAACAACAGTTGAGGAGGGCCTTAAACAGCTGCAGAAGGCTGAAAGAACACAGAAACAAGGAGGGATGGTTATGTGCGTATCTGTGCTTGTTATCATGTGCTTCATTATGTTGGTTCTCCTGGTTCTCAAGGAAATATTTTTGTGA 1026 42.59 MATRNRTLLFKKYRDALKSVRVPTSSSLASGSPSTSGGGGGGPVIELVSTSLLHPNRSYAPLSTEDPGYSSKGALTVGLPPAWVDVSEEISTSVQRAQIKMAELAKAHAKALMPSFGDGKEDQRLIEALTQEITGLIKKSEKRLQRLCVAGPSEDSNVRKNVQRSLATDLQNLSMELRKKQSTYLKRLRQQKEGQDGIDLEMNLNGSRSIAEDDDLDNMIFNEHQMAKLKKSEAFTAEREREIQQAREMSLFTAFLVVESVNELAQIMKDLSVLVIDQQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKQGGMVMCVSVLVIMCFIMLVLLVLKEIFL 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10785740 10790587 - BLOR09121 Blo18g00633 73937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00633 341 MobiDBLite consensus disorder prediction 22 37 - -
Blo18g00633 341 SMART SynN_4 74 189 IPR006011 GO:0016020
Blo18g00633 341 CDD SNARE_syntaxin16 237 306 - -
Blo18g00633 341 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 276 307 IPR000727 -
Blo18g00633 341 MobiDBLite consensus disorder prediction 22 46 - -
Blo18g00633 341 Gene3D - 80 299 - -
Blo18g00633 341 SMART tSNARE_6 228 307 IPR000727 -
Blo18g00633 341 SUPERFAMILY t-snare proteins 79 300 IPR010989 GO:0016020|GO:0016192
Blo18g00633 341 PANTHER SYNTAXIN 1 336 IPR045242 -
Blo18g00633 341 PANTHER SYNTAXIN-43-LIKE 1 336 - -
Blo18g00633 341 Pfam SNARE domain 281 333 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00673 Blo-Chr17:17428536 Blo18g00633 Blo-Chr18:10785740 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00633 K08489 - jre:109011309 525.783