Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00635 ATGACGAGGGCTCCTCTTGTTCCTCTCGCGACTCTAATAGGGCGGGAGCTTAGGAAAGAAAAGGCCGAGAAACCTTTTGTAAAGTTTGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGATTACTTTCTCATAAAACCCAATTGCCAGCGGATTCCTGAAAACCCATCTTCATCATTTTCCGTCTTTGCGATTTTCGATGGGCACAATGGAATATCAGCCGCTATCTTTGCAAAGGAGCATTTATTGGGCAATGTCTTGAGTGCAATTCCTCAAGGGATCAGTCGAGACGAATGGCTTCAAGCCCTTCCTCGGGCTCTGGTTTCCGGATTTGTAAAAACAGACATTGAGTTTCAGCAGAAAGGTGAGACTTCAGGGACTACTGTCACATTTGTTGTGATTGATGGATGGACAGTTACAGTTGCATCTGTAGGAGATTCTCGGTGCATATTGGACACTCAGGGAGGTGTGGTTTCTCTGCTGACTGTAGATCACAGGCTTGAGGAGAATGAGGAAGAGAGGGAGCGAGTCACTGCCAGTGGGGGTGAGGTAGGAAGGCTCAATGTTTTTGGAGGAAATGAGGTTGGGCCTCTTCGCTGCTGGCCAGGTGGACTATGTCTTTCTAGATCCATCGGTGACACAGATGTGGGAGAATTTATTGTTCCAATTCCGCATGTTAAGCAAGTGAAGCTTTCAACGGCTGGAGGAAGACTGTTAATAGCTTCTGACGGCATCTGGGACGCATTATCGTCTGATATGGCTGCCAAATCTTGTCGTGGTTTACCCGTTGAGCTTGCTGCTAAGTTGGTCGTGAAGGAGGCTCTGCGGTCGAGGGGCCTGAAGGATGATACCACATGTTTAGTTGTTGATATAATCCCTTCAGATCAACCTGTGCCTCTACCAACTCCAAGTAGGAAACAAAATATGATAACTTCACTTATTTTTGGGAGGAAATCACATAACTTTTCAAACAAAGCTGGGAGTAATAAGCTTTCTGCTGTTGGAGTTGTGGAGGAATTATTTGAAGAGGGCTCTGCAGTACTTGCTGAGAGGTTGGGCAAGGATTTTCATTCGGACCCAAATTCTGGGATCGTCAAATGTGCAGTATGCCAAGTGAATCAACCCCTAAATGAAACTTTATCGGGGAATTCCGACCCTTTGTTTTCAGCATCATTGAAGGCGTGGGAGGGCCCTATCCTCTGTCCAAACTGTCGGAAAAAGAAAGATGCAATGGAAGGGAAAAGACCAAGCAAACCCATGATAACCTCGTAA 1269 46.26 MTRAPLVPLATLIGRELRKEKAEKPFVKFGQAALAKKGEDYFLIKPNCQRIPENPSSSFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGISRDEWLQALPRALVSGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSTAGGRLLIASDGIWDALSSDMAAKSCRGLPVELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDQPVPLPTPSRKQNMITSLIFGRKSHNFSNKAGSNKLSAVGVVEELFEEGSAVLAERLGKDFHSDPNSGIVKCAVCQVNQPLNETLSGNSDPLFSASLKAWEGPILCPNCRKKKDAMEGKRPSKPMITS 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10858196 10860301 + BLOR09123 Blo18g00635 73939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00635 422 Gene3D - 31 295 IPR036457 -
Blo18g00635 422 PANTHER ALPHABET, ISOFORM E-RELATED 3 421 - -
Blo18g00635 422 Pfam Protein phosphatase 2C 51 260 IPR001932 -
Blo18g00635 422 SUPERFAMILY PP2C-like 36 290 IPR036457 -
Blo18g00635 422 CDD PP2Cc 36 290 IPR001932 -
Blo18g00635 422 SMART PP2C_SIG_2 44 290 IPR001932 -
Blo18g00635 422 SMART PP2C_4 16 288 IPR001932 -
Blo18g00635 422 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 3 421 - -
Blo18g00635 422 ProSiteProfiles PPM-type phosphatase domain profile. 18 290 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00635 Blo-Chr18:10858196 Blo01g01427 Blo-Chr1:53080047 3.10E-23 dispersed
Blo17g00668 Blo-Chr17:17077808 Blo18g00635 Blo-Chr18:10858196 0 transposed
Blo10g00378 Blo-Chr10:6280001 Blo18g00635 Blo-Chr18:10858196 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00635 - - csv:101219622 709.909