Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00647 ATGAAGGTTCATCAATTTGCATGCCGATTCTGGGACCTCGAACCACCCTCGCTTTCCCATGGCTGCAAGCGTCTCCGTCCTCTCGCTCCCAAGCTTCAAAACAACACTGATACTACCATCTCCAACTTTGATCTCAAGAACTACATCAGCCCCAATTGCTGCCCTAGAACAAATCCTTCTTCTTCCTTCTCTTCAGACGACAAGAGAGATTCACCTCAAGTGGAGACGCATCCTGGAGGGACAAGGTGGAATCCAACTCAAGAGCAGATAGGGATATTGGAGATGCTTTACAGAGGAGGAATGAGGACTCCTAATGCACAAGAAATAGAACAAATGACAAAACAGCTTGGTAATTATGGAAAAATAGAAGGAAAAAATGTGTTTTATTGGTTTCAAAACCACAAAGCTCGAGAAAGGCAGAAACAGAAGCGAAATAGTCTTGGTCTTTGCCATAGCCCAAGAGCATCTGTAGCGGACTCTAGGGAATGCCCTGTAATATTTTTTCCATTTTATGATGTTGAAGTTGCAGTAGAAAAAGTTTCTAATGGAATTTATGTGCAGGTAGAAGGAATAGATCATAAAAGAGTGGAAGATAGTTCGCTCAAGAGAAAGTGCAGAAGCTGGGTATTTGAATGCTTGGAGGAAGGGGAAGATCCAGGAGACAGAACTTTGGAGTTGTTTCCATTGCACCCAGAAGGTAGATGA 705 43.12 MKVHQFACRFWDLEPPSLSHGCKRLRPLAPKLQNNTDTTISNFDLKNYISPNCCPRTNPSSSFSSDDKRDSPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQEIEQMTKQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLCHSPRASVADSRECPVIFFPFYDVEVAVEKVSNGIYVQVEGIDHKRVEDSSLKRKCRSWVFECLEEGEDPGDRTLELFPLHPEGR 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11829088 11829907 - BLOR09135 Blo18g00647 73951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00647 234 Gene3D - 80 147 - -
Blo18g00647 234 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 234 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Blo18g00647 234 SMART HOX_1 78 145 IPR001356 GO:0003677
Blo18g00647 234 MobiDBLite consensus disorder prediction 56 85 - -
Blo18g00647 234 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Blo18g00647 234 CDD homeodomain 81 142 IPR001356 GO:0003677
Blo18g00647 234 SUPERFAMILY Homeodomain-like 76 146 IPR009057 -
Blo18g00647 234 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 234 - -
Blo18g00647 234 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00647 Blo-Chr18:11829088 Blo01g00756 Blo-Chr1:10156514 3.08E-24 dispersed
Blo18g00647 Blo-Chr18:11829088 Blo13g01096 Blo-Chr13:33107554 1.12E-25 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13603 PF00046 Homeodomain 1.60E-18 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00647 - - cit:102627740 283.493