Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00657 ATGGACGGAGAGTGTTGCAGCTCCGCCGCCTCAAGCTTGGAGAAGAGGAAGCAGAAGGACAATCGGCAAGAGAAGCGTTACAGGGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTTGCTGAAATTAGAGAACCGAATAAAAGGTCTAGGATTTGGCTAGGGTCTTACACAACTCCGATCGCCGCCGCTCGTGCGTATGACACCGCAGTGTTTTACCTCCGGGGATCGTCTGCTCGCCTGAATTTTCCCGAGTTGATCTTCCAAGAAGATCAGCTAAACGACATGTCCGCAGCTTCAATACGGAAAAAGGCCACCGAGGTTGGAGCTAGGGTGGACGCAATCGAAGCTTCTCTTAACGCCTCCAAGTCTAATTCTTCTCAGCTATCGGAAAAACCTGATTTAAACGAGTTTCCAGACCCAGAAAACTCCGACGAAGAGGACCATCTTCTGTGA 453 50.33 MDGECCSSAASSLEKRKQKDNRQEKRYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGSSARLNFPELIFQEDQLNDMSAASIRKKATEVGARVDAIEASLNASKSNSSQLSEKPDLNEFPDPENSDEEDHLL 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 12325563 12326015 - BLOR09145 Blo18g00657 73961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00657 150 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Blo18g00657 150 CDD AP2 25 85 IPR001471 GO:0003700|GO:0006355
Blo18g00657 150 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Blo18g00657 150 MobiDBLite consensus disorder prediction 1 25 - -
Blo18g00657 150 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 144 - -
Blo18g00657 150 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Blo18g00657 150 PRINTS Ethylene responsive element binding protein signature 65 85 IPR001471 GO:0003700|GO:0006355
Blo18g00657 150 MobiDBLite consensus disorder prediction 118 150 - -
Blo18g00657 150 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Blo18g00657 150 MobiDBLite consensus disorder prediction 134 150 - -
Blo18g00657 150 MobiDBLite consensus disorder prediction 118 132 - -
Blo18g00657 150 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
Blo18g00657 150 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 144 - -
Blo18g00657 150 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01061 Blo-Chr4:15228463 Blo18g00657 Blo-Chr18:12325563 1.91E-55 dispersed
Blo12g00962 Blo-Chr12:27752920 Blo18g00657 Blo-Chr18:12325563 2.34E-72 dispersed
Blo12g00963 Blo-Chr12:27757652 Blo18g00657 Blo-Chr18:12325563 3.59E-72 dispersed
Blo16g00400 Blo-Chr16:14566956 Blo18g00657 Blo-Chr18:12325563 3.28E-54 dispersed
Blo18g00138 Blo-Chr18:1285485 Blo18g00657 Blo-Chr18:12325563 2.53E-24 dispersed
Blo18g00657 Blo-Chr18:12325563 Blo18g00081 Blo-Chr18:691852 7.27E-26 dispersed
Blo18g00657 Blo-Chr18:12325563 Blo01g01521 Blo-Chr1:54799376 3.62E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13604 PF00847 AP2 1.20E-11 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00657 K09286 - csv:101219005 223.016