Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00689 ATGCTTAGCCGTGAAAGCTCTTGTGGTTTAAATCGCTGCCTTCCTCAACTCTACAGTCTTCGCCTAGCTCACGATCTGGCCACCTGTGAATTGTGTGATTTCCTCTTCTCTCTTTCTCTTCCGTTCCTTTTGTGTAAAAAAGCGGTGCACCTCAAATTAGTGTCTTTTGAAACTATAGAAATGGCCAACAAGCTTTCTGACGAACTAACCCAGAAAACAGGCGTTTTTGGTCTCATGGTATGGGAAGTCATCGGAATTGCTGTCGGGTTGTTCATTGTAGGTATCCTATCCATTCTATCATTATGTCTCACCTCAAGAAAAAAGTCAAGGAGAGGTAGGGACGAGGTCACTCTCAGTCAAATCCCAACTGTCTCTAAGGAGATCAAAGAAGTTAGAGTGGAGCATTTATCAGCAGCTGAATTTGTTCCTCGTAATGGAATTCTTCTAACCATTCATGACAAATCGAGTGAAAAAGGTTCGGACAAGGTTCTGGTGCACCTTGATGTGGGTAAGATGAAGAATGGAGACAATGGCAGTCAATCTGGCTCCTTTCATCAGTTTGATAAAGATGGAGGTGGATCCCAATCAGGGGAAGAAGGGAGTTCTGGCAAGATTACCATATACAGACCTTCTTCTTCTGCTTCATATCCGTTGACCGCCCCTTCCCCGCTTTCCGGCCTGCCTGAATTTTCTCACTTGGGTTGGGGCCACTGGTTTACGCTCAGAGATCTTGAGGTGGCCACCAATCGATTCTCCAAAGAAAATGTGCTTGGAGAGGGTGGCTATGGAGTTGTTTATAGGGGGTGTCTAATCAACGGAATTGCTGTGGCTGTTAAAAGGATTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCCATTGGTCACGTCCGCCATAAGAATTTGGTTCGTCTTCTTGGATATTGCATGGAAGGGACTCATAGAATGCTGGTTTATGAGTATGTGAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCAGCATGGGTACCTTACCTGGGAGGCGCGTACTAAAATTCTACTTGGCACTGCCAAAGCGCTTGCGTATTTGCACGAAGCCATTGAGCCAAAAGTGGTGCATCGCGACATAAAGTCGAGCAACATATTAATCGACGATGACTTCAATGCTAAGGTATCTGACTTTGGCCTGGCCAAGTTGCTTGGTGCTGGAAAGAGTCACGTCACCACTCGAGTTATGGGGACCTTCGGATATGTAGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTCTTGAAACTATTACCGGAAGAGATCCTGTAGACTATGGACGCTCTGCACAGGAGGTAAATCTTGTAGATTGGTTGAAAATGATGGTTGGAAGCAGGCGATCAGAAGAAGTTGTTGATCCAAATATGGAGGTAAGGCCATCCACAAGAGCCTTGAAACGAGCGCTTTTGACTGCTTTGAGGTGTGTCGACCCCGATTCTGAAAAAAGACCAAAGATGGGTCAAATTGTTCGAATGCTTGAATCGGAGGAGTATCCACTACCACGAGAGGATCGAAGGCACCGAAGAGCTCAGGCCAGCAGCATGGATACTGAATCACAGAGGGAGTATTCCGATACGGAGTTGAGTGAAAATCCGGTGTCGAAATCAGAGAGCAGGAGCAACCAACAAATGTAG 1722 45.64 MLSRESSCGLNRCLPQLYSLRLAHDLATCELCDFLFSLSLPFLLCKKAVHLKLVSFETIEMANKLSDELTQKTGVFGLMVWEVIGIAVGLFIVGILSILSLCLTSRKKSRRGRDEVTLSQIPTVSKEIKEVRVEHLSAAEFVPRNGILLTIHDKSSEKGSDKVLVHLDVGKMKNGDNGSQSGSFHQFDKDGGGSQSGEEGSSGKITIYRPSSSASYPLTAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYRGCLINGIAVAVKRILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRQHGYLTWEARTKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLETITGRDPVDYGRSAQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLESEEYPLPREDRRHRRAQASSMDTESQREYSDTELSENPVSKSESRSNQQM 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 14827290 14830558 - BLOR09177 Blo18g00689 73993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00689 573 SMART serkin_6 251 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00689 573 MobiDBLite consensus disorder prediction 508 573 - -
Blo18g00689 573 Pfam Protein kinase domain 252 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00689 573 Gene3D Transferase(Phosphotransferase) domain 1 327 539 - -
Blo18g00689 573 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 62 571 - -
Blo18g00689 573 MobiDBLite consensus disorder prediction 555 573 - -
Blo18g00689 573 CDD STKc_IRAK 257 523 - -
Blo18g00689 573 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Blo18g00689 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Blo18g00689 573 MobiDBLite consensus disorder prediction 174 206 - -
Blo18g00689 573 SUPERFAMILY Protein kinase-like (PK-like) 235 544 IPR011009 -
Blo18g00689 573 MobiDBLite consensus disorder prediction 508 554 - -
Blo18g00689 573 Gene3D Phosphorylase Kinase; domain 1 233 326 - -
Blo18g00689 573 PANTHER OS01G0323000 PROTEIN 62 571 - -
Blo18g00689 573 ProSiteProfiles Protein kinase domain profile. 251 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00877 Blo18g00689 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00689 Blo-Chr18:14827290 Blo06g00945 Blo-Chr6:32676531 1.81E-90 dispersed
Blo17g00692 Blo-Chr17:18529350 Blo18g00689 Blo-Chr18:14827290 0 transposed
Blo17g00877 Blo-Chr17:28915243 Blo18g00689 Blo-Chr18:14827290 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84829 PF00069 Pkinase 1.20E-48 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00689 - - mnt:21405451 877.47