Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00718 ATGGCTCTAGAAGCTCTTACCTCTCCTTCGGCGCCGTCGCCGGGGTTTCAGTGCGACGGTCCCAATCTCAACTACTTGGAACCATGGACGAAGGGGAAGCGGTCCAAACGCCCACGTTTAGATGGCGCAGAGACGGAGGAAGAGTATTTCGCTCTCTGCCTCATCATGCTCGCTCGCGGCGGTGATCCCTTTTCGACTCAGCCAAAAACTGCTGCTCCGTCCACGCCGAAGCTCAACTACAAGTGTTCTGTCTGCGATAAGGCGTTTTATTCTTACCAGGCTTTGGGGGGACACAAGGCGAGCCACCGAAAACTTGTTGTTGGAGAAGATCGATCGACGTCGTCCACTGCTACGACGACCTCTGCTCTAACTGCAGCGACCACTGGTTCAGCTTCTATAGCTAGAGCAAGAACTCATGAATGCTCTATTTGCCACAAGTCGTTTCCGACGGGGCAGGCCTTGGGTGGACACAAGCGGTGCCACTACGAAGGCGGCAATAAATCTAGCAGCGCCACGGTGACCTCGTCGGAAGGAATGGGAAGCTCCAGCCATATCCGAGGCTTCGATCTGAACCTCCCTGCTTTGCCGGAATTTTCACCAAAATTCTTGGTCTCCGGCGACGACGAGGTTGAGAGCCCTCTGCCCACAAAGAAACCCCGTCTTTTGACGCATCCAAAAATTGAAATCTCTCAAGATCATTGA 702 53.85 MALEALTSPSAPSPGFQCDGPNLNYLEPWTKGKRSKRPRLDGAETEEEYFALCLIMLARGGDPFSTQPKTAAPSTPKLNYKCSVCDKAFYSYQALGGHKASHRKLVVGEDRSTSSTATTTSALTAATTGSASIARARTHECSICHKSFPTGQALGGHKRCHYEGGNKSSSATVTSSEGMGSSSHIRGFDLNLPALPEFSPKFLVSGDDEVESPLPTKKPRLLTHPKIEISQDH 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 17808813 17809514 - BLOR09206 Blo18g00718 74022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00718 233 SMART c2h2final6 80 102 IPR013087 -
Blo18g00718 233 SMART c2h2final6 139 161 IPR013087 -
Blo18g00718 233 MobiDBLite consensus disorder prediction 211 233 - -
Blo18g00718 233 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Blo18g00718 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 161 IPR013087 -
Blo18g00718 233 ProSitePatterns Zinc finger C2H2 type domain signature. 141 161 IPR013087 -
Blo18g00718 233 PANTHER ZINC FINGER PROTEIN ZAT10 1 224 - -
Blo18g00718 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 102 IPR013087 -
Blo18g00718 233 MobiDBLite consensus disorder prediction 204 233 - -
Blo18g00718 233 Gene3D Classic Zinc Finger 78 161 - -
Blo18g00718 233 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 224 IPR044653 GO:0003700
Blo18g00718 233 SUPERFAMILY beta-beta-alpha zinc fingers 80 161 IPR036236 -
Blo18g00718 233 MobiDBLite consensus disorder prediction 1 22 - -
Blo18g00718 233 Pfam C2H2-type zinc finger 139 162 - -
Blo18g00718 233 Pfam C2H2-type zinc finger 80 104 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo18g00718 Blo-Chr18:17808813 Blo14g00204 Blo-Chr14:1732744 2.94E-21 dispersed
Blo04g01361 Blo-Chr4:31652117 Blo18g00718 Blo-Chr18:17808813 6.64E-60 transposed
Blo12g00982 Blo-Chr12:27851538 Blo18g00718 Blo-Chr18:17808813 3.25E-81 wgd
Blo17g00862 Blo-Chr17:28115317 Blo18g00718 Blo-Chr18:17808813 1.79E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13608 PF13912 zf-C2H2_6 1.60E-12 CL0361 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00718 - - zju:107433725 273.863