Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00720 ATGGAGTCTGTTGGTGTTTTTCCTGATGGAGAATGGGACTCTTTCAGTTCAATTTTTGACTCTGACGAGGTCAATTCGCTGCCTCGCTATCTCGGAAACTTTCGGTTGCAGGAAAATTATGATGCCGGCCTGAATTCTGCACCGCCTACTTGCTTCGATCCTCCTGCTAGTTTAGGTATTAATGGGGCTAACAAGAGCTGGTGTTATTCTCTTGATGCTTTGACTGCTGATTTCAACCTGAGCAAACATGATTATCGCCACAGTTCGTATCACACTTCCCAACCAAATGATATTTCTATTTTCATTGATATGGATTCAATGGGTGTTAGAAAGACTTGTTCATTTTCCGCATCTCTGACTGAAAATTTAGAGGAAGATCGTCATCAAGCTCTATCTTTGTGTGGCGATATCTGTAGTCATGGATATGAGAATTTAAACTATAATCTTCCAACCTCGACGGCTATAAATCCCAGCAACGAAGAAGAAAAACTCAAAAGGAAGTTAAATGGTAGAGTGCAGAATACACAGTTGGCCTCCAACGCAAAGAAGAAAACTCGAGTCTCTCAGCATGTACAAAAGAGTGCAAAAATTGTAGAGTCGCCAAAATCTACTTTTAAAAGTGTCAAGAATTCTTCAAAAACCAGTGTTCAAGAAGACGGCAATGGAGGATCTGAAGGACAGAGCTCTGGTAGTAGTAGTACAGATGACGAAAATGCTTCACATGATTACAATGGAGGTGCAACTTCAGCGTCTAAAGCGAGTGAAGTTCTCAACTCCAACGGAAAAACAAGAGCTGCAAGAGGGTCAGCTACTGATCCACAAAGTCTCTACGCAAGAAAACGAAGAGAGAGAATAAATGAGAGACTCAGAATCTTGCAAAAACTCGTTCCCAATGGCACAAAGGTCGATATAAGCACAATGCTCGAAGAAGCAGTTCATTACGTTAAGTTTCTGCAGCTTCAAATCAAGCTCTTAAGCTCCGATGATCATTGGATGTATGCTCCAATCGCATACAATGGATTGGACATTGGTCTGCACCAGAAGATCTCTCCACTTCAACTCAATTGA 1068 41.48 MESVGVFPDGEWDSFSSIFDSDEVNSLPRYLGNFRLQENYDAGLNSAPPTCFDPPASLGINGANKSWCYSLDALTADFNLSKHDYRHSSYHTSQPNDISIFIDMDSMGVRKTCSFSASLTENLEEDRHQALSLCGDICSHGYENLNYNLPTSTAINPSNEEEKLKRKLNGRVQNTQLASNAKKKTRVSQHVQKSAKIVESPKSTFKSVKNSSKTSVQEDGNGGSEGQSSGSSSTDDENASHDYNGGATSASKASEVLNSNGKTRAARGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDHWMYAPIAYNGLDIGLHQKISPLQLN 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 17979927 17981456 + BLOR09208 Blo18g00720 74024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00720 355 CDD bHLH_AtIND_like 270 332 - -
Blo18g00720 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 271 334 IPR036638 GO:0046983
Blo18g00720 355 MobiDBLite consensus disorder prediction 168 281 - -
Blo18g00720 355 Coils Coil 354 355 - -
Blo18g00720 355 SMART finulus 275 324 IPR011598 GO:0046983
Blo18g00720 355 MobiDBLite consensus disorder prediction 170 270 - -
Blo18g00720 355 Gene3D - 271 330 IPR036638 GO:0046983
Blo18g00720 355 PANTHER TRANSCRIPTION FACTOR BHLH54 4 351 - -
Blo18g00720 355 Pfam Helix-loop-helix DNA-binding domain 279 319 IPR011598 GO:0046983
Blo18g00720 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 269 318 IPR011598 GO:0046983
Blo18g00720 355 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 351 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01498 Blo18g00720 CCT
Blo01g01498 Blo18g00720 ECH
Blo17g00860 Blo18g00720 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00204 Blo-Chr10:2582902 Blo18g00720 Blo-Chr18:17979927 8.01E-25 dispersed
Blo12g00959 Blo-Chr12:27725668 Blo18g00720 Blo-Chr18:17979927 4.24E-18 dispersed
Blo18g00720 Blo-Chr18:17979927 Blo01g00628 Blo-Chr1:7078735 1.59E-20 dispersed
Blo17g00860 Blo-Chr17:28076507 Blo18g00720 Blo-Chr18:17979927 3.27E-173 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13609 PF00010 HLH 1.10E-08 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00720 - - zju:107433661 254.603