Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00725 ATGAACTTTTTACGGGCCTGCTTTTTTCCGGCATCGGATCGATATGCCAAGGGTTTGGATTCCGGAGGGCGACAGGACGGCCTCCTCTGGTACAAAGACAGTGGGCAACACTTGAATGGTGATTTTTCAATGGCTGTTGTTCAGGCCAATAACTTACTTGAGGACCAGAGTCAGATTGAATCTGGCTGTTTGAGTTCTAATGAATTTGGCCCATTCGGCACTTTTGTTGGCATTTACGACGGGCATGGCGGCCCCGAGACTTCCCGCTATATCACTGATCACCTCTTTCGGCACCTCAAGAGATTTGTTTCGGAGCAAAAAACAATGTCTGTCGATGTAATAAGGAAGGCATTCCAAGCTACGGAAGATGGGTTCACGTCCTTAGTCTCAAAAGAATGGCAGATGAAGCCACAAATTGCAGCCGTTGGATCATGTTGCCTAGTAGGAATCGTGTGTAGTGGGACTCTCTACATTGCCAACTTAGGCGATTCACGAGCTGTTTTAGGAAAATTAGTGAAAGCAGCGGGGGAAGTTCGATCGATACAATTGTCGGCAGAGCATAATGTGGCCATTGAGTCTGTAAGACAGGAGCTTCGTGCTGCACATCCCCACGACCGGCACATTGTTCTTCTTAAGCATAATGTATGGCGAGTTAAGGGTCTGATTCAGATCTCTCGATCTATCGGCGATGTGTATTTGAAGAAAGCTGAGTTCAACAGGGAGCCTCTGTATGCTAAGTTTCGCCTCCGTGAAGCCTTCAAGAGTCCGATTTTGAGCTCAGAACCGTCTATTTCGGTGCTCCAATTGCAGCCTTGTGATCAATTCATCATATTTGCATCGGACGGTCTGTGGGAACAACTCAGCAATCAGGAAGCTGTAGTCATAGTTAAAAATCATTCACGCAGTGGAATTGCGAGGAGGCTAGTGAAAGAGGCATTACAAGAAGCAGCAAAGAAGAGAGAAATAAGGTATTCCGACTTGAAGAAGATCGACAGAGGTGTGAGACGGCATTTCCACGATGACATCACAGTGATAGTCATGTTCCTTGATTCGAATGTGGTGAGCAGGGCTAGCTCAGTGAAGTCCCCTAATTTATCCGTGAGAGGCGGAATCAGCCTTCCTTCTAAAACACTCTCTCCTTACACTACACCTGTAGAAACGGGCACTGCCTGA 1173 46.97 MNFLRACFFPASDRYAKGLDSGGRQDGLLWYKDSGQHLNGDFSMAVVQANNLLEDQSQIESGCLSSNEFGPFGTFVGIYDGHGGPETSRYITDHLFRHLKRFVSEQKTMSVDVIRKAFQATEDGFTSLVSKEWQMKPQIAAVGSCCLVGIVCSGTLYIANLGDSRAVLGKLVKAAGEVRSIQLSAEHNVAIESVRQELRAAHPHDRHIVLLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREAFKSPILSSEPSISVLQLQPCDQFIIFASDGLWEQLSNQEAVVIVKNHSRSGIARRLVKEALQEAAKKREIRYSDLKKIDRGVRRHFHDDITVIVMFLDSNVVSRASSVKSPNLSVRGGISLPSKTLSPYTTPVETGTA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 18643623 18645264 + BLOR09213 Blo18g00725 74029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00725 390 SMART PP2C_4 33 347 IPR001932 -
Blo18g00725 390 Gene3D - 31 360 IPR036457 -
Blo18g00725 390 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Blo18g00725 390 PANTHER ALPHABET, ISOFORM E-RELATED 2 377 - -
Blo18g00725 390 Pfam Protein phosphatase 2C 74 318 IPR001932 -
Blo18g00725 390 SUPERFAMILY PP2C-like 50 350 IPR036457 -
Blo18g00725 390 ProSiteProfiles PPM-type phosphatase domain profile. 41 349 IPR001932 -
Blo18g00725 390 CDD PP2Cc 42 349 IPR001932 -
Blo18g00725 390 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 2 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00080 Blo-Chr3:2712736 Blo18g00725 Blo-Chr18:18643623 3.11E-134 dispersed
Blo07g01413 Blo-Chr7:34152304 Blo18g00725 Blo-Chr18:18643623 4.30E-144 dispersed
Blo13g00497 Blo-Chr13:26208463 Blo18g00725 Blo-Chr18:18643623 0 dispersed
Blo18g00725 Blo-Chr18:18643623 Blo15g00384 Blo-Chr15:5408640 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00725 - K01102 tcc:18607514 640.573