Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00736 GAAATGAAAGGAGCTGTGCTCGTGGCTATCGCAGCGACCATCGGAAACTTTCTGCAAGGATGGGATAATGCTACCATTGCTGGAGCAATCGTGTATATCAAGAAGGATCTTGCACTGGAAACTACAGTCGAAGGTCTTGTGGTGGCTATGTCTCTGATTGGGGCCACCATTATCACCACCTGTTCTGGAGCAATATCAGATTGGATCGGCCGTCGGCCGATGCTCATAGCCTCGTCCGTGTTGTATTTTATCAGTGGCTTGATAATGCTTTGGTCGCCCAATGTAATTGTCCTCTGCATTGCCAGGCTTCTCGATGGCTTTGGAATTGGTCTGGCTGTAACGCTAATTCCGGTTTATATATCTGAAACGGCCCCATCGGAAATAAGAGGATTGCTAAATACCCTTCCTCAGTTCACTGGATCTGGTGGCATGTTTTTATCGTATTGTATGGTTTTTGGAATGTCCTTCTCGGCCTCGCCCAGCTGGAGAATAATGCTCGGAGTTCTTTCCATTCTCTCTCTCATATATCTTGGGTTGACTGTGTTTTTCTTGCCTGAATCTCCTCGGTGGCTTGTCAGTAAGGGAAGGATGGTCGAGGCTAAGAAGGTTCTGCAGAGATTGCGCGGCAAAGAAGATGTTTCAGGTTCCTTCTCGTACATATGTTATATAATTAGATACTTGTTGTTAACGCATATCAAGATTAACGTAGAAAACCTTTCCCCCCAAAAAAAAGATAGACAAAATTTACTCTTTGTAGCATATGATGATTTTTCTGGGATTAATGGGGTCCTGTACTACACTCCTCAAATTCTCGAAGAGGCGGGTGTTGAAGTTCTGCTTTCGGATTTGGGCATTAGCTCTGAATCTGCATCTTTCCTTATCAGCGCATTCACATCACTTTTGATGCTCCCATGCATTGGTGTGGCCATGAGGCTCATGGACATTGCTGGTAGAAGGCGGCTACTTCTCGTGACGATCCCTATTCTAATATTCTCGCTCGTCATTCTCGTCATTTTCGAGCTTGTCGAGCTGAGCTCGGTGGCAAATGCAGCAATTTCAACAGTTTGCGTGGTGGTTTACTTCTGTGTATTTGTGATGGCTTATGGACCAATCCCCAACATCCTCTGCTCGGAGATTTTCCCGACCAGGGTCCGGGGTCTCTGCATCGCCATTTGCGCATTGGTGTACTGGATTTGTGACATCATTGTGACATACACGCTGCCGGTGATGCTGACCGGAATTGGTCTGGCCGGAGTATTTGGCATTTATGCCGTGGTGTGTGTCATATCGTGGGTATTTGTGTTCTTGAAAGTTCCGGAAACCAAAGGCATGCCCCTGGAAGTCATTGCTGACTTCTTCTCGGTCGGCACCCGACAGAGCACTGCAGCAAAGACCGAGTGA 1401 46.9 EMKGAVLVAIAATIGNFLQGWDNATIAGAIVYIKKDLALETTVEGLVVAMSLIGATIITTCSGAISDWIGRRPMLIASSVLYFISGLIMLWSPNVIVLCIARLLDGFGIGLAVTLIPVYISETAPSEIRGLLNTLPQFTGSGGMFLSYCMVFGMSFSASPSWRIMLGVLSILSLIYLGLTVFFLPESPRWLVSKGRMVEAKKVLQRLRGKEDVSGSFSYICYIIRYLLLTHIKINVENLSPQKKDRQNLLFVAYDDFSGINGVLYYTPQILEEAGVEVLLSDLGISSESASFLISAFTSLLMLPCIGVAMRLMDIAGRRRLLLVTIPILIFSLVILVIFELVELSSVANAAISTVCVVVYFCVFVMAYGPIPNILCSEIFPTRVRGLCIAICALVYWICDIIVTYTLPVMLTGIGLAGVFGIYAVVCVISWVFVFLKVPETKGMPLEVIADFFSVGTRQSTAAKTE 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 19760371 19763511 + BLOR09224 Blo18g00736 74040

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00736 466 ProSitePatterns Sugar transport proteins signature 2. 104 129 IPR005829 GO:0016021|GO:0022857|GO:0055085
Blo18g00736 466 TIGRFAM SP: MFS transporter, sugar porter (SP) family 5 448 IPR003663 GO:0016020|GO:0022857|GO:0055085
Blo18g00736 466 CDD MFS_GLUT_like 11 440 - -
Blo18g00736 466 PANTHER - 2 231 - -
Blo18g00736 466 ProSiteProfiles Major facilitator superfamily (MFS) profile. 8 442 IPR020846 GO:0022857
Blo18g00736 466 ProSitePatterns Sugar transport proteins signature 1. 309 325 IPR005829 GO:0016021|GO:0022857|GO:0055085
Blo18g00736 466 PANTHER - 256 463 - -
Blo18g00736 466 ProSitePatterns Sugar transport proteins signature 1. 62 79 IPR005829 GO:0016021|GO:0022857|GO:0055085
Blo18g00736 466 Gene3D MFS general substrate transporter like domains 3 214 IPR036259 -
Blo18g00736 466 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 2 231 - -
Blo18g00736 466 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 256 463 - -
Blo18g00736 466 SUPERFAMILY MFS general substrate transporter 6 447 IPR036259 -
Blo18g00736 466 Pfam Sugar (and other) transporter 8 450 IPR005828 GO:0016021|GO:0022857|GO:0055085
Blo18g00736 466 PRINTS Sugar transporter signature 99 118 IPR003663 GO:0016020|GO:0022857|GO:0055085
Blo18g00736 466 PRINTS Sugar transporter signature 354 375 IPR003663 GO:0016020|GO:0022857|GO:0055085
Blo18g00736 466 PRINTS Sugar transporter signature 16 26 IPR003663 GO:0016020|GO:0022857|GO:0055085
Blo18g00736 466 PRINTS Sugar transporter signature 255 265 IPR003663 GO:0016020|GO:0022857|GO:0055085
Blo18g00736 466 PRINTS Sugar transporter signature 377 389 IPR003663 GO:0016020|GO:0022857|GO:0055085
Blo18g00736 466 Gene3D MFS general substrate transporter like domains 240 465 IPR036259 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00736 - - - zju:107419824 382.489
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00418 Blo-Chr15:5976229 Blo18g00736 Blo-Chr18:19760371 1.44E-96 dispersed
Blo18g00736 Blo-Chr18:19760371 Blo02g00082 Blo-Chr2:564918 5.02E-52 dispersed
Blo13g00468 Blo-Chr13:25420387 Blo18g00736 Blo-Chr18:19760371 8.55E-92 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g59 . . . . . . . . Cmo05g00985 Cmo12g00626 . . . Car12g00666 . . Cpe07g00599 Bhi04g01215 . . . . . . Cla08g00932 Cam08g1378 Cec08g0959 Cco08g1079 Clacu08g1085 . Cre08g0868 . . Cone17ag1472 Cone20ag0006 . . . Cme03g01330 . Blo18g00736 . Bda01g01570 Bpe02g01764 . Bma01g00694 . . . . Cma12g00691 Cma05g00966 Car05g00848 . Cpe11g00777 . . . . . . . . . . . . . . . Lsi08g00773 . Chy03g00605 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0024788 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00736 Blo_Chr18 FPKM 0.0 0.0 0.166374 0.0 0.0 0.0 0.0 0.0 0.0 0.0