Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00740 ATGAGACGTTCTGTGGTTTTCTTTCTCTTGTCGACGGCCATACTACACTCGTTGATCGATTGTTTGTCTGACTCCGCCTTCTCCCCCTCCGTCCTTTCCGCTCCATATCCCAAGGATTTCAAGCCCTTGACTTCCCTTTTACCCCCGATTCCCGAGAGTGATGTCGCTGTCGTGGCAGCTCTGGATGGGGAAATTTATTTGGTGCAAATTCGTTCGAAAAAAGTTCTATGGTCGTTCTCGTCAGGACGCCCCATTTATTCATCGTATCAGGCTTCTGTTCGTCATGGCAGTGAGAAGAAGAATTCTTCTGACTCGAGTAGTGAGTTTTATGTCGACTGCGGTGAGGACTGGTCTCTCTACATGCATAGCAAACGCTATGGAAAAGTGAAACTGCCATTGAGTATTGAAGATTACATTCGGAACACTCCTTATGTATCTGACGATGGAGCTGTCACATTGGGTTCAAAGAAGACCAGTTTTATCCTTCTTGATGCCAAATCCGGAAGATTAATCAATTCTCACACTCTGACCGATTTTCCTTCCACGTCAGAGTTAAAGAATGTGGAAGAAGATCCTGTTTTGTCGAATGAAGATGCTGAAGAATTGCTTGAGTCTAGCACTGATAACTTAGAAGCAACTGAGTCAATGATTTACATCTTTAGAACAGATTATATGGTTCAGCATTATTCCCCAGACTCTGGCAAAGTATTATGGAATGTGACCTTCTCTGAATTTGATGCTTCTTTTCGATTTCAGAATCTGAAGAAACCTTTTCTTACTTTTGGAAATGAGCCTCTGGCTGAGTACCATGGTGATGTTGGGTTTCAAATTCCTCAGCAGAGAAGGCCCATGATTTTCCGGATTCGCGATAATGGCCTGATGGAATCCTTTTCTATTCTCGATAGACTTGCAAATGCCTATAAGGAAGGCTGGCCACTCCCTCTACCCTCTAGTAATCACCAGCAACCCCCTGCCTCTATGGATCAGTTTCCATTATCTTTACAATACAAAGAAGGCAAGGAAATGCTTGCATTGCCCTCTCCTGAAACAGAAAATTTTGGGGTATTGCCAATTCACGATGGAGAAACTGGTAAATTCAAAAACACTAGCATGGTTGCCGATATTGCTGCAAGGTATAGTATGCAGTCTTTTGTTCTATTTCTTCCTACAAGTGTCGCCATTGTGGGCTTCTTCTTTTATCACTATTTTGGACGACTACTGTCTAGGTGGACTGAGCAGACGTCAGACCTTAAAACACAAACTGGGATCTCAAAAAAGAAGAAAACTCGGAGGTCTGGAAATAATAAAAATGTTACTAATAATGACAAATCGCCAGAAACTATCAGCTCACGCAAAAATAAAATTGAATATGATAAGGCAAGTCTAAAAAATGATGGAAGTGAAAGGAGATCCTCAATTTCCTTCAGCAGCCTTGGTGACGGCCTTATGGAAGGGCGAAGAATTGGTAAATTAATTGTTTCTAGCAAAGAAATTGCTTTGGGAAGCAATGGTACGGTTGTACTTGAAGGAATTTATGATGGTCGTCCAGTAGCTGTGAAGAGACTTGTGCAATCTCATCATGATGTGGCTCTGAAGGAGATTCAAAATCTTATTGCTTCTGATCAGCATCCAAATATAGTTCGATGGTATGGAGTAGAATATGATCAAGACTTTGTATATCTCTCTCTGGAACGCTGTACTTGTAGTTTGTTCGACCTGATTTCCTCATGCTCTGAAATCTTTCAAAGTCAAACTGTCACCAAGGTTCAGGATTTAGATTCGAATGAATGCACTCCAATTCAGTCAGTGTTAGAGAATTCTAAGTTTACGTACTTGTGGAAGGCAAATGGTTATCCTTCACCTCAGTTGTTGAGGTTGATGAGGGATATTGTCTCTGGGCTTTCCCATTTGCATGAGCTTGGAATCATCCATAGAGACTTGAAGCCTCAAAATGTTTTGATAATCAAGGATAAATCTGTGTGTGGAAAGCTTTCAGATATGGGTATTAGCAAACGTCTTCGTGGGGACAGCTTGTCCTTGACGCAGAATGCTACTGGTTATGGCAGTTCTGGTTGGCAAGCACCCGAACAGCTTCTCCAAAAACGACAGAGTCGTGGAGTTGATTTATTTAGTTTAGGCTGTGTTCTCTTTTTCTGTATCACTGGCGGTAAGCACCCATTTGGAGATGGCATCGAACGAGATGTAAATATCATTAATAACCGGATGGACCTTTTCTTGGTGGAGAGCTTACCAGAAGCTGTGGATCTTTTGTCTCATCTTTTAGATTCTGATCCAGAGATGAGGCCAAGTGCCAAGGAAGTTTTGCATCATCCCTTTTTTTGGAGTTCAGAGATGAGACTTGCATTTCTCCGAGACGTAAGTGATCGGGTTGAACTGGAAGACAGGGAGGAATCTGAACTCTTAAAAGCAATAGAAAACGTTGGCGTCATTGCTTTAGATGGAAGGTGGGACGAAAAGATGGAAAATGCTTTTATCAATAACATTGGTAAGTACAGACGATACCGATATGACAGTGTGCGCGACTTACTACGTGTTATACGCAATAAGTTAAATCACTACCGAGAACTGCCTCAAGAAATCCAGGAGTTGTTAGGGCCGGTTCCTGAAGGATTTGAGAGCTATTTTACGAGCCGGTTTCCGAGACTGCTTATAGGGGTCCATCAAGCGATACTCAAATACTGCAGGGAGGAGGAATTTATGATTAAATACAGTAGCTATACAATACAGGCTGTTGATAACCCTCCTCCTGTCAAAATGAGGCTCATGTGTCGGAAAGCGGAAGGTGGTGAAGATGAGATGGGTTCAGAGTGA 2832 42.23 MRRSVVFFLLSTAILHSLIDCLSDSAFSPSVLSAPYPKDFKPLTSLLPPIPESDVAVVAALDGEIYLVQIRSKKVLWSFSSGRPIYSSYQASVRHGSEKKNSSDSSSEFYVDCGEDWSLYMHSKRYGKVKLPLSIEDYIRNTPYVSDDGAVTLGSKKTSFILLDAKSGRLINSHTLTDFPSTSELKNVEEDPVLSNEDAEELLESSTDNLEATESMIYIFRTDYMVQHYSPDSGKVLWNVTFSEFDASFRFQNLKKPFLTFGNEPLAEYHGDVGFQIPQQRRPMIFRIRDNGLMESFSILDRLANAYKEGWPLPLPSSNHQQPPASMDQFPLSLQYKEGKEMLALPSPETENFGVLPIHDGETGKFKNTSMVADIAARYSMQSFVLFLPTSVAIVGFFFYHYFGRLLSRWTEQTSDLKTQTGISKKKKTRRSGNNKNVTNNDKSPETISSRKNKIEYDKASLKNDGSERRSSISFSSLGDGLMEGRRIGKLIVSSKEIALGSNGTVVLEGIYDGRPVAVKRLVQSHHDVALKEIQNLIASDQHPNIVRWYGVEYDQDFVYLSLERCTCSLFDLISSCSEIFQSQTVTKVQDLDSNECTPIQSVLENSKFTYLWKANGYPSPQLLRLMRDIVSGLSHLHELGIIHRDLKPQNVLIIKDKSVCGKLSDMGISKRLRGDSLSLTQNATGYGSSGWQAPEQLLQKRQSRGVDLFSLGCVLFFCITGGKHPFGDGIERDVNIINNRMDLFLVESLPEAVDLLSHLLDSDPEMRPSAKEVLHHPFFWSSEMRLAFLRDVSDRVELEDREESELLKAIENVGVIALDGRWDEKMENAFINNIGKYRRYRYDSVRDLLRVIRNKLNHYRELPQEIQELLGPVPEGFESYFTSRFPRLLIGVHQAILKYCREEEFMIKYSSYTIQAVDNPPPVKMRLMCRKAEGGEDEMGSE 943
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 19978075 19982520 + BLOR09228 Blo18g00740 74044

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00740 943 Pfam Protein kinase domain 496 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00740 943 ProSiteProfiles KEN domain profile. 783 913 IPR010513 GO:0004540|GO:0006397
Blo18g00740 943 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 51 241 IPR011047 -
Blo18g00740 943 MobiDBLite consensus disorder prediction 417 473 - -
Blo18g00740 943 SMART serkin_6 492 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00740 943 SMART ire1_9 49 80 IPR018391 -
Blo18g00740 943 SMART ire1_9 143 175 IPR018391 -
Blo18g00740 943 SMART ire1_9 210 241 IPR018391 -
Blo18g00740 943 Gene3D Transferase(Phosphotransferase) domain 1 600 782 - -
Blo18g00740 943 Gene3D - 33 278 IPR015943 GO:0005515
Blo18g00740 943 PANTHER SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1B 44 911 - -
Blo18g00740 943 SUPERFAMILY Protein kinase-like (PK-like) 495 792 IPR011009 -
Blo18g00740 943 Pfam Ribonuclease 2-5A 786 910 IPR010513 GO:0004540|GO:0006397
Blo18g00740 943 Gene3D Phosphorylase Kinase; domain 1 482 564 - -
Blo18g00740 943 MobiDBLite consensus disorder prediction 447 466 - -
Blo18g00740 943 Coils Coil 196 216 - -
Blo18g00740 943 Gene3D KEN domain 783 921 IPR038357 -
Blo18g00740 943 SMART PGNneu 844 899 - -
Blo18g00740 943 ProSiteProfiles Protein kinase domain profile. 492 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00740 943 CDD RNase_Ire1 784 910 - -
Blo18g00740 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Blo18g00740 943 PANTHER IRE1-RELATED 44 911 IPR045133 GO:0004521|GO:0004674|GO:0030968
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00740 K08852 ERN1; serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-] - jre:109011489 1036.56
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00265 Blo-Chr6:14054750 Blo18g00740 Blo-Chr18:19978075 0 dispersed
Blo18g00740 Blo-Chr18:19978075 Blo01g00199 Blo-Chr1:2628327 3.31E-19 dispersed
Blo18g00740 Blo-Chr18:19978075 Blo08g00422 Blo-Chr8:8287756 3.00E-18 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g69 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo18g00740 . Bda01g01566 Bpe02g01760 . Bma01g00697 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002039 1 4 2 2 2 2 3 2 2 3 1 2 2 2 2 2 2 3 2 4 2 1 2 3 1 1 1 2 1 3 62
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84830 PF00069 Pkinase 4.10E-40 CL0016 Blo PK