Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00747 ATGGTGATGGATGGGGACAGAAATGAATGTGGAGCAGAGATTTTGGACGAAGAGAGTGATTTTAGCACGTCCAATCCTCCTGAGGAATTGCCTGTGGCCCAAGGCTTGGTGGCAATAATTGAATGTGTGGCTCAGTATGGAGATTATAAAAGGACTCAGAGAAAGGAATGTTATAACCTTGTGCGGCGCATGAAGTTGTTATTGCCGCTTTTTGAAGAATTGCGGGATTTGGACACGACGATCCAGGAGAATGGCGTTGTTTGGTTGTGCAATCTCAAGAAGGCTTTGCTTGCAGCCAATAAATTGTTAAAAACCTGTAATGAGGGAAGCAAGATTTATTTGGCCCTCGAAAGCGAAGGGATTATGATCAAATTTAAGGGCGTTTATGATAAATTGATCAAAGCTTTGGATGGTTTGCCGCATGATGAACTGGGGGTCTCAGATGAAGTAACAGAAGAGGTAGAGCTGATGCGCACACAACTTAAACGAGCAAAAAGACGCACGGACACCCAGGATATAGAACTTGCAATGGATATCATGGTGGTACTCTCTAAACAGGATGAAAGAAATGCAGATAGTGTCGTAATAGAAAGAATTGCGAAGAAGCTCGACTTGCAAAGCATTGAGAATATTAAAATAGAAACCATAGCTGTAAAAAACCTTGTAAAAGAAAGAGGTGGACCAAATGCAGAGAGTACCCAGCAAATCATGGATTTGCTTCAAAAGTTCAGACTGGCAGCAGGGATGGAAAACACCCGCATTCTTGATGATCCTGTTATGCCTAAAACGCTTGTGAAATGCCATTCTCTGGTGATTCCCCATGAATTTCTATGTCCAATCACCCTCGAAATAATGACAGATCCTGTTATCATTGCTAGCGGACAGACGTATGAGAGAGAGAGCATAGAGAAGTGGTTTGAAACCAACCACCGGACATGTCCGAAGACCAGGCAGACTCTTGCTCACCTAGCTTTGGCGCCCAATTATGCCCTGAAAAACCTTATACTGCAGTGGTGCGAGAAGCATAAATTCCAGCTTCCCAACAAGGACACATGTGCAGGACTTGAGAGCTCCTACACGGAACACAAAGAGGAAATCTCTTGTCTGGTTGAGAACCTTTCATCCAGTCAGTTAGACGTGCAGAGAAAAACTGTGATGAAAATACGGATGCTCTCGAAAGAGAATTCTGAAAATAGAGTTTTGATAGCTAATGGTGGAGGAATTCCACCTCTCGTGCATCTCCTCTCATATCCTGATTCCAAGATTCAAGAGCATGCTGTTACAGCCTTGTTGAATTTGTCAATTGATGAAGCCAACAAAACATTGATTGCTAGAGAAGGGGCCATCCCAGCCATTATTGAAGTTCTGCAGAAAGGCAGCATTGAAGCCAAAGAGAACTCTGCAGCAGCCTTGTTTAGCTTATCAATGGAGGACGAGAATAAGCTAACTGTTGGGCTGTCCAACGGTATACCACCCTTGGTTGATTTGTTGCAGAATGGTACAATTAGAGGTAAAAAAGATGCAGCAACGGCACTGTTCAACCTATCTCTAAACCAAGGAAACAAGGCAAGAGCCATTAGTGCCGGCATTGTCACGCCCTTGCTCCAGCTGCTCAAGGACAGAAACTTGGGCATGGTTGATGAAGCCCTCTCCATCTTCTTGCTTCTCTCGTCACACCCAGATGGGCGGCAGGAAATAGGGCAGCTTTCATTTATTGAAACTCTGGTCGAGTTTATTCGAGAAGGAACTCCTAAGAACAAGGAATGTGCAACTTCGGTTCTGCTCGAGCTGGGTTCGAAGAATTCGTCCTGCATTTTGGCTGCACTTCAGCTTGGAGTCTATGAGCATTTGGTCGAGGTCTCGAATACGGGAACGAATCGAGGCAAGAGAAAAGCGAACGCACTGTTGCAGCTCATGAGCAAAAGTGAGCAAATTCCATGA 1941 44.56 MVMDGDRNECGAEILDEESDFSTSNPPEELPVAQGLVAIIECVAQYGDYKRTQRKECYNLVRRMKLLLPLFEELRDLDTTIQENGVVWLCNLKKALLAANKLLKTCNEGSKIYLALESEGIMIKFKGVYDKLIKALDGLPHDELGVSDEVTEEVELMRTQLKRAKRRTDTQDIELAMDIMVVLSKQDERNADSVVIERIAKKLDLQSIENIKIETIAVKNLVKERGGPNAESTQQIMDLLQKFRLAAGMENTRILDDPVMPKTLVKCHSLVIPHEFLCPITLEIMTDPVIIASGQTYERESIEKWFETNHRTCPKTRQTLAHLALAPNYALKNLILQWCEKHKFQLPNKDTCAGLESSYTEHKEEISCLVENLSSSQLDVQRKTVMKIRMLSKENSENRVLIANGGGIPPLVHLLSYPDSKIQEHAVTALLNLSIDEANKTLIAREGAIPAIIEVLQKGSIEAKENSAAALFSLSMEDENKLTVGLSNGIPPLVDLLQNGTIRGKKDAATALFNLSLNQGNKARAISAGIVTPLLQLLKDRNLGMVDEALSIFLLLSSHPDGRQEIGQLSFIETLVEFIREGTPKNKECATSVLLELGSKNSSCILAALQLGVYEHLVEVSNTGTNRGKRKANALLQLMSKSEQIP 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 20192362 20195070 - BLOR09235 Blo18g00747 74051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00747 646 PANTHER U BOX DOMAIN-CONTAINING 26 643 - -
Blo18g00747 646 SUPERFAMILY RING/U-box 271 347 - -
Blo18g00747 646 SMART Ubox_2 275 338 IPR003613 GO:0004842|GO:0016567
Blo18g00747 646 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 488 530 IPR000225 GO:0005515
Blo18g00747 646 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 406 448 IPR000225 GO:0005515
Blo18g00747 646 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 15 26 643 - -
Blo18g00747 646 Gene3D - 350 645 IPR011989 -
Blo18g00747 646 Coils Coil 147 167 - -
Blo18g00747 646 SUPERFAMILY ARM repeat 366 642 IPR016024 -
Blo18g00747 646 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 447 489 IPR000225 GO:0005515
Blo18g00747 646 Gene3D - 29 141 IPR036537 GO:0007166
Blo18g00747 646 ProSiteProfiles U-box domain profile. 271 345 IPR003613 GO:0004842|GO:0016567
Blo18g00747 646 CDD RING-Ubox_PUB 276 318 IPR045210 -
Blo18g00747 646 SMART arm_5 395 435 IPR000225 GO:0005515
Blo18g00747 646 SMART arm_5 518 558 IPR000225 GO:0005515
Blo18g00747 646 SMART arm_5 436 476 IPR000225 GO:0005515
Blo18g00747 646 SMART arm_5 559 599 IPR000225 GO:0005515
Blo18g00747 646 SMART arm_5 477 517 IPR000225 GO:0005515
Blo18g00747 646 Pfam Armadillo/beta-catenin-like repeat 478 516 IPR000225 GO:0005515
Blo18g00747 646 Pfam Armadillo/beta-catenin-like repeat 395 434 IPR000225 GO:0005515
Blo18g00747 646 Pfam U-box domain 272 343 IPR003613 GO:0004842|GO:0016567
Blo18g00747 646 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 346 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01130 Blo-Chr3:37761378 Blo18g00747 Blo-Chr18:20192362 1.59E-172 dispersed
Blo07g01243 Blo-Chr7:32530776 Blo18g00747 Blo-Chr18:20192362 1.01E-06 dispersed
Blo09g00395 Blo-Chr9:14873526 Blo18g00747 Blo-Chr18:20192362 2.98E-07 dispersed
Blo13g00043 Blo-Chr13:620938 Blo18g00747 Blo-Chr18:20192362 8.43E-12 dispersed
Blo14g00121 Blo-Chr14:881191 Blo18g00747 Blo-Chr18:20192362 3.62E-162 dispersed
Blo15g00428 Blo-Chr15:6165272 Blo18g00747 Blo-Chr18:20192362 0 dispersed
Blo18g00747 Blo-Chr18:20192362 Blo13g00851 Blo-Chr13:31131878 1.28E-96 dispersed
Blo18g00742 Blo-Chr18:19986181 Blo18g00747 Blo-Chr18:20192362 1.12E-16 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00747 - - jre:109016026 934.095