Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00776 ATGGCTTGCAAAAGTGTTTCATTGCTTGTGTTGATGGTGAAGCTTTTGATAGCAGCAATATCTTCCACCACTTTTACTATTTCAAATAAATGCGATTACTCTGTATGGCCGGGAATTCTCTCTAACGCCGGCGTACCGCCACTTTCCACCACCGGATTCGCTCTCCAAAAGGGGGAGTCCAAGACTATCTCCGCCCCAACTTCATGGGCCGGCCGATTCTGGGGTCGAACTTTCTGTTCCAACCATTCCTCCTCCGGCGAATTCTACTGCGTCATCGGTGACTGTGGCTCCGGCGAGATCGAATGCTCAGGCAAAGGCCCCGCCCCGCCGGCTACTCTGGCTGAATTCACTCTCGACGGGCAGGATGGATATGATTTTTTCGATGTCAGCTTGGTGGACGGCTATAACCTCCCTATGCTAGTGGCTCCTCAGGGCGGAACAGGACGCAACTGTGCGACCACGGGCTGCGTGGCGGATCTCAATAGCGCGTGTCCTTCGGGGCTGAAAGTGACGGGGGAGGATGGGAGGGAGGGTGTTGCCTGTAGAAGTGCATGCCAGGCTCTTGGGCAGCCGCAATATTGTTGCAGCGGCGCGTATAGAACACCGGATACTTGCAAGCCGTCGTCGTACTCGCAGATTTTTAAAAAAGCATGCCCACGGGCTTACAGCTATGCCTACGACGATGAGAGCAGCATCTTCACCTGCGTCGCCGCCGATTACGTCATCACTTTCTGCGCCTCTCCGCAAAGGAGGGACAGTCTAAAATCGTCGGGGAAGGGGGAGAACTCGACCACAAACTCGTCCATCGGAAGCAGCGCCATGGTGTACGAAGGTGCTGCTGCTGCGTTGTACCAAAATAATTCCGAATCATCCACATGCTGCAACGTGGCTGGTCGGACTGTCATTGTGATCCTAGTCAGCAGCATCATGATGGGAATTGGACGGTCCCGCATCCCACTGGCATTGTTGTCCATGGCTGTGGCATCGCAACTTTTTGGCTGA 1002 54.39 MACKSVSLLVLMVKLLIAAISSTTFTISNKCDYSVWPGILSNAGVPPLSTTGFALQKGESKTISAPTSWAGRFWGRTFCSNHSSSGEFYCVIGDCGSGEIECSGKGPAPPATLAEFTLDGQDGYDFFDVSLVDGYNLPMLVAPQGGTGRNCATTGCVADLNSACPSGLKVTGEDGREGVACRSACQALGQPQYCCSGAYRTPDTCKPSSYSQIFKKACPRAYSYAYDDESSIFTCVAADYVITFCASPQRRDSLKSSGKGENSTTNSSIGSSAMVYEGAAAALYQNNSESSTCCNVAGRTVIVILVSSIMMGIGRSRIPLALLSMAVASQLFG 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 22182084 22183165 - BLOR09264 Blo18g00776 74080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00776 333 SUPERFAMILY Osmotin, thaumatin-like protein 23 246 IPR037176 -
Blo18g00776 333 Pfam Thaumatin family 29 245 IPR001938 -
Blo18g00776 333 PANTHER BNAA02G17480D PROTEIN 15 273 - -
Blo18g00776 333 CDD TLP-PA 24 245 - -
Blo18g00776 333 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Blo18g00776 333 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Blo18g00776 333 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Blo18g00776 333 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Blo18g00776 333 PANTHER OS03G0233200 PROTEIN 15 273 IPR001938 -
Blo18g00776 333 ProSiteProfiles Thaumatin family profile. 22 245 IPR001938 -
Blo18g00776 333 SMART tha2 25 246 IPR001938 -
Blo18g00776 333 Gene3D Thaumatin 23 246 IPR037176 -
Blo18g00776 333 PIRSF PR5 1 288 IPR001938 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01603 Blo-Chr1:55891279 Blo18g00776 Blo-Chr18:22182084 3.21E-131 wgd
Blo12g00882 Blo-Chr12:27019113 Blo18g00776 Blo-Chr18:22182084 9.67E-130 wgd
Blo16g00082 Blo-Chr16:2209602 Blo18g00776 Blo-Chr18:22182084 3.05E-90 wgd
Blo18g00776 Blo-Chr18:22182084 Blo04g00882 Blo-Chr4:10098299 8.42E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00776 - - tcc:18591569 405.986