Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00785 ATGTCTTCTACGTTCAGCGGCGATGAGACGGCGCCTTTTTTTGGCTTCCTTGGAGCGGCCGCTGCGCTCATCTTCTCCTGTATGGGGGCTGCTTATGGAACGGCGAAAAGCGGTGTAGGGGTAGCATCGATGGGAGTGATGAGGCCTGAGCTGGTGATGAAATCGATTGTGCCCGTTGTTATGGCCGGAGTTTTGGGTATTTACGGTCTGATTATTGCTGTAATTATTAGCACTGGGATCAACCCCAAGGCCAAATCCTATTACCTTTTTGATGGCTACGCTCATTTGTCCTCTGGTCTTGCTTGTGGCCTCGCTGGTCTCTCTGCTGGCATGGCTATTGGAATCGTTGGTGATGCTGGTGTTAGAGCGAATGCACAGCAGCCAAAGCTATTTGTTGGGATGATTCTCATTCTTATCTTTGCTGAAGCACTTGCCCTGTATGGTCTCATTGTTGGCATCATTCTTTCTTCACGAGCAGCCACATGTTTGGCCAATGAAAATGAGGTACGTGGAATTGGAAATGAAGTTGCAATTGTGTTGCATTCCGTCTTAGCAACTCTACATGAGAAGGACGATGAGGACCCCGTTCATTATGTCAATCCACTAGTGACGAAGACATGGACATGGCTGAGAGTAGGCCTAGACGCCCAACACAAGCAAAAGGCAGTTTCGCTGGAATGGGCCTTGGCAAAAAGGTCTAGTGCCAACTGTCAGAGAGGTGATAGGGCAAGCAGACCATCGGTTTTGCATCCGACACCTTTTGAGGTCAGCAATGGTAACGAACAGTACTCTATCGATTTGGACAGGCGTACTTGTACTTGTTACCAGTGGGAGTTGACTGGCATCCCATGTGTCCATGCAGTCTCGTGCATTCACTTCATGAGGAGATCTCCTAAGGAATTTGTGCATGCGTGCTATCACCGGGAAACATACATGGCGATGTACTCCTACTTTCTCCGCCCCGTCAATGGACCAATCGAGTGGCCTCCTGTGACAAATCTTGTGAAGGATCGATATACGCCTATAGGGGGGGTGAATATAGCGTTTCTAATATTTTCGTGCGATACTTTAATCTCTAATAACCCTAAGTGA 1092 48.26 MSSTFSGDETAPFFGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAATCLANENEVRGIGNEVAIVLHSVLATLHEKDDEDPVHYVNPLVTKTWTWLRVGLDAQHKQKAVSLEWALAKRSSANCQRGDRASRPSVLHPTPFEVSNGNEQYSIDLDRRTCTCYQWELTGIPCVHAVSCIHFMRRSPKEFVHACYHRETYMAMYSYFLRPVNGPIEWPPVTNLVKDRYTPIGGVNIAFLIFSCDTLISNNPK 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 22701057 22705257 + BLOR09273 Blo18g00785 74089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00785 363 SUPERFAMILY F1F0 ATP synthase subunit C 87 156 IPR035921 -
Blo18g00785 363 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 162 - -
Blo18g00785 363 PRINTS Vacuolar ATP synthase 16kDa subunit signature 134 157 IPR000245 GO:0033179|GO:0046961|GO:1902600
Blo18g00785 363 PRINTS Vacuolar ATP synthase 16kDa subunit signature 107 133 IPR000245 GO:0033179|GO:0046961|GO:1902600
Blo18g00785 363 PRINTS Vacuolar ATP synthase 16kDa subunit signature 56 80 IPR000245 GO:0033179|GO:0046961|GO:1902600
Blo18g00785 363 PRINTS Vacuolar ATP synthase 16kDa subunit signature 30 54 IPR000245 GO:0033179|GO:0046961|GO:1902600
Blo18g00785 363 ProSiteProfiles Zinc finger SWIM-type profile. 263 295 IPR007527 GO:0008270
Blo18g00785 363 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 13 121 IPR011555 GO:0033179|GO:0046961|GO:1902600
Blo18g00785 363 Pfam SWIM zinc finger 265 288 IPR007527 GO:0008270
Blo18g00785 363 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 162 - -
Blo18g00785 363 CDD ATP-synt_Vo_c_ATP6C_rpt2 89 156 - -
Blo18g00785 363 Pfam ATP synthase subunit C 17 76 IPR002379 GO:0015078|GO:0033177|GO:1902600
Blo18g00785 363 Pfam ATP synthase subunit C 97 155 IPR002379 GO:0015078|GO:0033177|GO:1902600
Blo18g00785 363 SUPERFAMILY F1F0 ATP synthase subunit C 14 77 IPR035921 -
Blo18g00785 363 CDD ATP-synt_Vo_c_ATP6C_rpt1 13 80 - -
Blo18g00785 363 Gene3D - 11 162 IPR035921 -
Blo18g00785 363 SMART 26again6 270 297 IPR006564 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00753 Blo18g00785 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01371 Blo-Chr1:51935608 Blo18g00785 Blo-Chr18:22701057 1.10E-17 dispersed
Blo12g01087 Blo-Chr12:28532149 Blo18g00785 Blo-Chr18:22701057 1.33E-21 dispersed
Blo18g00785 Blo-Chr18:22701057 Blo02g00973 Blo-Chr2:37711807 8.64E-76 dispersed
Blo02g00650 Blo-Chr2:15808163 Blo18g00785 Blo-Chr18:22701057 1.24E-106 transposed
Blo15g00664 Blo-Chr15:19363022 Blo18g00785 Blo-Chr18:22701057 1.28E-57 transposed
Blo17g00753 Blo-Chr17:23845470 Blo18g00785 Blo-Chr18:22701057 3.50E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00785 K02155 - pvy:116130875 277.33