Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo18g00785 | ATGTCTTCTACGTTCAGCGGCGATGAGACGGCGCCTTTTTTTGGCTTCCTTGGAGCGGCCGCTGCGCTCATCTTCTCCTGTATGGGGGCTGCTTATGGAACGGCGAAAAGCGGTGTAGGGGTAGCATCGATGGGAGTGATGAGGCCTGAGCTGGTGATGAAATCGATTGTGCCCGTTGTTATGGCCGGAGTTTTGGGTATTTACGGTCTGATTATTGCTGTAATTATTAGCACTGGGATCAACCCCAAGGCCAAATCCTATTACCTTTTTGATGGCTACGCTCATTTGTCCTCTGGTCTTGCTTGTGGCCTCGCTGGTCTCTCTGCTGGCATGGCTATTGGAATCGTTGGTGATGCTGGTGTTAGAGCGAATGCACAGCAGCCAAAGCTATTTGTTGGGATGATTCTCATTCTTATCTTTGCTGAAGCACTTGCCCTGTATGGTCTCATTGTTGGCATCATTCTTTCTTCACGAGCAGCCACATGTTTGGCCAATGAAAATGAGGTACGTGGAATTGGAAATGAAGTTGCAATTGTGTTGCATTCCGTCTTAGCAACTCTACATGAGAAGGACGATGAGGACCCCGTTCATTATGTCAATCCACTAGTGACGAAGACATGGACATGGCTGAGAGTAGGCCTAGACGCCCAACACAAGCAAAAGGCAGTTTCGCTGGAATGGGCCTTGGCAAAAAGGTCTAGTGCCAACTGTCAGAGAGGTGATAGGGCAAGCAGACCATCGGTTTTGCATCCGACACCTTTTGAGGTCAGCAATGGTAACGAACAGTACTCTATCGATTTGGACAGGCGTACTTGTACTTGTTACCAGTGGGAGTTGACTGGCATCCCATGTGTCCATGCAGTCTCGTGCATTCACTTCATGAGGAGATCTCCTAAGGAATTTGTGCATGCGTGCTATCACCGGGAAACATACATGGCGATGTACTCCTACTTTCTCCGCCCCGTCAATGGACCAATCGAGTGGCCTCCTGTGACAAATCTTGTGAAGGATCGATATACGCCTATAGGGGGGGTGAATATAGCGTTTCTAATATTTTCGTGCGATACTTTAATCTCTAATAACCCTAAGTGA | 1092 | 48.26 | MSSTFSGDETAPFFGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAATCLANENEVRGIGNEVAIVLHSVLATLHEKDDEDPVHYVNPLVTKTWTWLRVGLDAQHKQKAVSLEWALAKRSSANCQRGDRASRPSVLHPTPFEVSNGNEQYSIDLDRRTCTCYQWELTGIPCVHAVSCIHFMRRSPKEFVHACYHRETYMAMYSYFLRPVNGPIEWPPVTNLVKDRYTPIGGVNIAFLIFSCDTLISNNPK | 363 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 22701057 | 22705257 | + | BLOR09273 | Blo18g00785 | 74089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo18g00785 | 363 | SUPERFAMILY | F1F0 ATP synthase subunit C | 87 | 156 | IPR035921 | - | |
Blo18g00785 | 363 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 3 | 162 | - | - | |
Blo18g00785 | 363 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 134 | 157 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Blo18g00785 | 363 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 107 | 133 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Blo18g00785 | 363 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 56 | 80 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Blo18g00785 | 363 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 30 | 54 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Blo18g00785 | 363 | ProSiteProfiles | Zinc finger SWIM-type profile. | 263 | 295 | IPR007527 | GO:0008270 | |
Blo18g00785 | 363 | TIGRFAM | V_ATP_synt_C: V-type ATPase, C subunit | 13 | 121 | IPR011555 | GO:0033179|GO:0046961|GO:1902600 | |
Blo18g00785 | 363 | Pfam | SWIM zinc finger | 265 | 288 | IPR007527 | GO:0008270 | |
Blo18g00785 | 363 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 3 | 162 | - | - | |
Blo18g00785 | 363 | CDD | ATP-synt_Vo_c_ATP6C_rpt2 | 89 | 156 | - | - | |
Blo18g00785 | 363 | Pfam | ATP synthase subunit C | 17 | 76 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Blo18g00785 | 363 | Pfam | ATP synthase subunit C | 97 | 155 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Blo18g00785 | 363 | SUPERFAMILY | F1F0 ATP synthase subunit C | 14 | 77 | IPR035921 | - | |
Blo18g00785 | 363 | CDD | ATP-synt_Vo_c_ATP6C_rpt1 | 13 | 80 | - | - | |
Blo18g00785 | 363 | Gene3D | - | 11 | 162 | IPR035921 | - | |
Blo18g00785 | 363 | SMART | 26again6 | 270 | 297 | IPR006564 | GO:0008270 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo17g00753 | Blo18g00785 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01371 | Blo-Chr1:51935608 | Blo18g00785 | Blo-Chr18:22701057 | 1.10E-17 | dispersed | |
Blo12g01087 | Blo-Chr12:28532149 | Blo18g00785 | Blo-Chr18:22701057 | 1.33E-21 | dispersed | |
Blo18g00785 | Blo-Chr18:22701057 | Blo02g00973 | Blo-Chr2:37711807 | 8.64E-76 | dispersed | |
Blo02g00650 | Blo-Chr2:15808163 | Blo18g00785 | Blo-Chr18:22701057 | 1.24E-106 | transposed | |
Blo15g00664 | Blo-Chr15:19363022 | Blo18g00785 | Blo-Chr18:22701057 | 1.28E-57 | transposed | |
Blo17g00753 | Blo-Chr17:23845470 | Blo18g00785 | Blo-Chr18:22701057 | 3.50E-83 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo18g00785 | K02155 | - | pvy:116130875 | 277.33 |