Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo18g00791 | ATGGCTGGATTTTTCTATCTAGGTGGGAGAGATCAAGATCTACGAAACAAAGAAAAGGAAGACGGAGAAGAAGAAGATCAGAGAGCACAAAACCTATACTTATACAGACAGGAAGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAGTACAATCAGCAAAACATGAGCAACTACCTGTCTTTCGGTGTGGGTCCCAGCCAAAGAAACTTCATGAACGTCTCTGATCATGATTTATCAAGATCAGGCAGCGGCGGAGGAGGAGGAGGAGGAGGAGGGATGAATTGCCAAGACTGTGGAAATCAAGCTAAGAAAGACTGTGCTTATTTGAGGTGTAGAACTTGCTGTAAAAGTAGAGGTTTTCAATGTCAAACCCACGTGAAAAGCACATGGGTTCCGGCATCCAAACGACGGGAGAGGCAGCAGCAGCTGGGGGCTTTGCATCAACTGCCGTCGGAAGGGCCGTCGCAACCTAGGCCAGGAGAGAATACGAAAAGGCTCAAGGAGTTGAACGTGGCCGGTTCTTCTCTTGCCTGCGCTCGTTTACCCTCCATCACATCAGGGTTAGAGCTGACGCAGTTTCCAGCTGAGGTGAATTCCCCAGCTGTGTTTCGCTGCGTGAAAGTCAGTGCAATGGACGATGAAGATGAACAGTTTGCATATCAGACGGCGGTGACCATCGGCGGCCATGTTTTCAAAGGAATTCTCTACGATCAAGGGCCCGAAAGTCGTTACACCGGCGGAGGCGGTGAAAGCTCCTCCGGTCACGGTGGTGATGAAGCCCAGCAACTTAACCTTATTACTGGACCCTCTGACACCATACCCACTGCAACTACTAGTAATCTTTCTGCAACATTGCTCGACTCTTCTCTATATCCAGCTCCTCTTACTGCATTCATCTCTGGTACGCAGTTCTTCCCACCTTCCCGGCCATGA | 936 | 49.47 | MAGFFYLGGRDQDLRNKEKEDGEEEDQRAQNLYLYRQEEIYNKGFEIWPQYNQQNMSNYLSFGVGPSQRNFMNVSDHDLSRSGSGGGGGGGGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPASKRRERQQQLGALHQLPSEGPSQPRPGENTKRLKELNVAGSSLACARLPSITSGLELTQFPAEVNSPAVFRCVKVSAMDDEDEQFAYQTAVTIGGHVFKGILYDQGPESRYTGGGGESSSGHGGDEAQQLNLITGPSDTIPTATTSNLSATLLDSSLYPAPLTAFISGTQFFPPSRP | 311 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 22983635 | 22985026 | + | BLOR09279 | Blo18g00791 | 74095 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo18g00791 | 311 | PANTHER | PROTEIN SHI RELATED SEQUENCE 7 | 1 | 308 | - | - | |
| Blo18g00791 | 311 | MobiDBLite | consensus disorder prediction | 246 | 264 | - | - | |
| Blo18g00791 | 311 | Pfam | Domain of unknown function (DUF702) | 93 | 242 | - | - | |
| Blo18g00791 | 311 | TIGRFAM | LRP1_Cterm: LRP1 C-terminal domain | 193 | 241 | IPR006511 | - | |
| Blo18g00791 | 311 | MobiDBLite | consensus disorder prediction | 132 | 163 | - | - | |
| Blo18g00791 | 311 | TIGRFAM | put_zinc_LRP1: putative zinc finger domain, LRP1 type | 95 | 137 | IPR006510 | - | |
| Blo18g00791 | 311 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 1 | 308 | IPR007818 | GO:0003700|GO:0006355 | |
| Blo18g00791 | 311 | MobiDBLite | consensus disorder prediction | 242 | 264 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo01g01581 | Blo18g00791 | CCT | |
| Blo01g01581 | Blo18g00791 | ECH | |
| Blo17g00762 | Blo18g00791 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo05g00815 | Blo-Chr5:29760986 | Blo18g00791 | Blo-Chr18:22983635 | 4.57E-89 | dispersed | |
| Blo06g00331 | Blo-Chr6:19623522 | Blo18g00791 | Blo-Chr18:22983635 | 1.49E-87 | dispersed | |
| Blo08g00128 | Blo-Chr8:1356080 | Blo18g00791 | Blo-Chr18:22983635 | 1.74E-44 | dispersed | |
| Blo01g01581 | Blo-Chr1:55617084 | Blo18g00791 | Blo-Chr18:22983635 | 2.15E-110 | wgd | |
| Blo17g00762 | Blo-Chr17:24256003 | Blo18g00791 | Blo-Chr18:22983635 | 6.62E-165 | wgd | |
| Blo18g00791 | Blo-Chr18:22983635 | Blo04g00900 | Blo-Chr4:10559249 | 6.97E-70 | wgd | |
| Blo18g00791 | Blo-Chr18:22983635 | Blo04g00529 | Blo-Chr4:4553860 | 2.91E-31 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 13613 | PF05142 | DUF702 | 8.80E-65 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo18g00791 | - | - | cmo:103488016 | 388.267 |