Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00791 ATGGCTGGATTTTTCTATCTAGGTGGGAGAGATCAAGATCTACGAAACAAAGAAAAGGAAGACGGAGAAGAAGAAGATCAGAGAGCACAAAACCTATACTTATACAGACAGGAAGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAGTACAATCAGCAAAACATGAGCAACTACCTGTCTTTCGGTGTGGGTCCCAGCCAAAGAAACTTCATGAACGTCTCTGATCATGATTTATCAAGATCAGGCAGCGGCGGAGGAGGAGGAGGAGGAGGAGGGATGAATTGCCAAGACTGTGGAAATCAAGCTAAGAAAGACTGTGCTTATTTGAGGTGTAGAACTTGCTGTAAAAGTAGAGGTTTTCAATGTCAAACCCACGTGAAAAGCACATGGGTTCCGGCATCCAAACGACGGGAGAGGCAGCAGCAGCTGGGGGCTTTGCATCAACTGCCGTCGGAAGGGCCGTCGCAACCTAGGCCAGGAGAGAATACGAAAAGGCTCAAGGAGTTGAACGTGGCCGGTTCTTCTCTTGCCTGCGCTCGTTTACCCTCCATCACATCAGGGTTAGAGCTGACGCAGTTTCCAGCTGAGGTGAATTCCCCAGCTGTGTTTCGCTGCGTGAAAGTCAGTGCAATGGACGATGAAGATGAACAGTTTGCATATCAGACGGCGGTGACCATCGGCGGCCATGTTTTCAAAGGAATTCTCTACGATCAAGGGCCCGAAAGTCGTTACACCGGCGGAGGCGGTGAAAGCTCCTCCGGTCACGGTGGTGATGAAGCCCAGCAACTTAACCTTATTACTGGACCCTCTGACACCATACCCACTGCAACTACTAGTAATCTTTCTGCAACATTGCTCGACTCTTCTCTATATCCAGCTCCTCTTACTGCATTCATCTCTGGTACGCAGTTCTTCCCACCTTCCCGGCCATGA 936 49.47 MAGFFYLGGRDQDLRNKEKEDGEEEDQRAQNLYLYRQEEIYNKGFEIWPQYNQQNMSNYLSFGVGPSQRNFMNVSDHDLSRSGSGGGGGGGGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPASKRRERQQQLGALHQLPSEGPSQPRPGENTKRLKELNVAGSSLACARLPSITSGLELTQFPAEVNSPAVFRCVKVSAMDDEDEQFAYQTAVTIGGHVFKGILYDQGPESRYTGGGGESSSGHGGDEAQQLNLITGPSDTIPTATTSNLSATLLDSSLYPAPLTAFISGTQFFPPSRP 311
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 22983635 22985026 + BLOR09279 Blo18g00791 74095
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00791 311 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 308 - -
Blo18g00791 311 MobiDBLite consensus disorder prediction 246 264 - -
Blo18g00791 311 Pfam Domain of unknown function (DUF702) 93 242 - -
Blo18g00791 311 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 193 241 IPR006511 -
Blo18g00791 311 MobiDBLite consensus disorder prediction 132 163 - -
Blo18g00791 311 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 95 137 IPR006510 -
Blo18g00791 311 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 308 IPR007818 GO:0003700|GO:0006355
Blo18g00791 311 MobiDBLite consensus disorder prediction 242 264 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo01g01581 Blo18g00791 CCT
Blo01g01581 Blo18g00791 ECH
Blo17g00762 Blo18g00791 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00815 Blo-Chr5:29760986 Blo18g00791 Blo-Chr18:22983635 4.57E-89 dispersed
Blo06g00331 Blo-Chr6:19623522 Blo18g00791 Blo-Chr18:22983635 1.49E-87 dispersed
Blo08g00128 Blo-Chr8:1356080 Blo18g00791 Blo-Chr18:22983635 1.74E-44 dispersed
Blo01g01581 Blo-Chr1:55617084 Blo18g00791 Blo-Chr18:22983635 2.15E-110 wgd
Blo17g00762 Blo-Chr17:24256003 Blo18g00791 Blo-Chr18:22983635 6.62E-165 wgd
Blo18g00791 Blo-Chr18:22983635 Blo04g00900 Blo-Chr4:10559249 6.97E-70 wgd
Blo18g00791 Blo-Chr18:22983635 Blo04g00529 Blo-Chr4:4553860 2.91E-31 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13613 PF05142 DUF702 8.80E-65 No_clan Blo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00791 - - cmo:103488016 388.267