Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00811 ATGGATGTTGGTGAGTTCAACAAAGAAACAAGAATACCAGGTGGGTCTTCCTCTTCCACATTTTCCCACCTCATCGGAGAATCCTCCGCCGGAGTTGACAGAAGACGATCATCAGAAGCTATACACAATGGCGTTAATTTTCCTCATCTTCTTCGTCAAGAATCGCTTGGCCAACAAAGAGATGTTGTTCCCGATCGAGTCCCTTCACCGGAAGAAAATTTCGGTGCGTTTACCGGTAGATCTAATCCGAGGAACTCACTGGCCGGAATTACTAGATACCGGGAATGTCTAAAGAACCATGCTGCGAACATTGGTGGGAACATTTACGACGGCTGCGGAGAGTTCATGGCGAACGGCGAAGACGGAACCCTAGAAGCCTTGAAATGCGCCGCCTGCGACTGCCACCGAAATTTCCACCGGAAAGAAGTCGACGGCGAGACGCAATTGATCAGTCCGACCAGGAGAACCATTGTCCTCAATCACTTACAGCTTCCACCGCCATTGCCGTCTCCCCACCACCATAAATTCTCAATGGGCCTGAATTTCCACTCAAGCCCTACCGCTCCGATCGTGGCGCCTATGAACGTCGCATTCGGCGGAAACGAATCCTCAAGCGAAGATCTAAACGTCTTCCATTCCAACGCCGAAGGGGTTCCGCACCCACCATTTTCACTCTCGAAGAAGAGGTTCAGAACCAAGTTCACTCAGGAACAGAAGAATAGAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGCAAAAGCAAAACGAAGAAGAAGTAGACAAGTTCTGCGCAGAAGTAGGAGTAAAGAGACAAGTTCTAAAGGTATGGATGCACAATAATAAAACGACCACCATGAAAAAGCAAAGCGAGAATCATGATCAGCCGTTGGAGATCACAGGAGCAGCCGAGGAAAGAGATTAG 927 48.87 MDVGEFNKETRIPGGSSSSTFSHLIGESSAGVDRRRSSEAIHNGVNFPHLLRQESLGQQRDVVPDRVPSPEENFGAFTGRSNPRNSLAGITRYRECLKNHAANIGGNIYDGCGEFMANGEDGTLEALKCAACDCHRNFHRKEVDGETQLISPTRRTIVLNHLQLPPPLPSPHHHKFSMGLNFHSSPTAPIVAPMNVAFGGNESSSEDLNVFHSNAEGVPHPPFSLSKKRFRTKFTQEQKNRMLEFAEKVGWRMQKQNEEEVDKFCAEVGVKRQVLKVWMHNNKTTTMKKQSENHDQPLEITGAAEERD 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 23935729 23936655 - BLOR09299 Blo18g00811 74115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00811 308 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 93 142 IPR006456 -
Blo18g00811 308 Gene3D - 219 288 - -
Blo18g00811 308 MobiDBLite consensus disorder prediction 55 81 - -
Blo18g00811 308 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 92 143 IPR006456 -
Blo18g00811 308 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 67 290 - -
Blo18g00811 308 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 227 283 IPR006455 -
Blo18g00811 308 MobiDBLite consensus disorder prediction 1 36 - -
Blo18g00811 308 SUPERFAMILY Homeodomain-like 223 286 IPR009057 -
Blo18g00811 308 MobiDBLite consensus disorder prediction 287 308 - -
Blo18g00811 308 MobiDBLite consensus disorder prediction 284 308 - -
Blo18g00811 308 MobiDBLite consensus disorder prediction 11 26 - -
Blo18g00811 308 Pfam ZF-HD protein dimerisation region 91 143 IPR006456 -
Blo18g00811 308 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 5 67 290 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00796 Blo18g00811 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00280 Blo-Chr3:5690317 Blo18g00811 Blo-Chr18:23935729 2.81E-56 dispersed
Blo17g00363 Blo-Chr17:3880322 Blo18g00811 Blo-Chr18:23935729 1.66E-42 dispersed
Blo18g00229 Blo-Chr18:2257098 Blo18g00811 Blo-Chr18:23935729 1.38E-45 dispersed
Blo18g00811 Blo-Chr18:23935729 Blo17g00244 Blo-Chr17:2439156 2.22E-43 dispersed
Blo15g00309 Blo-Chr15:3512138 Blo18g00811 Blo-Chr18:23935729 5.71E-24 transposed
Blo16g00046 Blo-Chr16:1874806 Blo18g00811 Blo-Chr18:23935729 1.48E-62 wgd
Blo17g00796 Blo-Chr17:25617141 Blo18g00811 Blo-Chr18:23935729 8.72E-171 wgd
Blo18g00811 Blo-Chr18:23935729 Blo04g00916 Blo-Chr4:10741087 1.89E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13615 PF04770 ZF-HD_dimer 5.50E-29 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00811 - - csv:101216040 359.377