Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo18g00828 | ATGATGGGAGCTTCCTCTTCTTCTCCTGACCTCTCCTTAAATATCAGTCCTCCATTTTTTCCAGAAACTGAAGATAATCAAGTCTCGAGAAAACCTGTAAACTGTGATCGAAGCTCACCCACATATTCCGGTAGCAGTACCGGAAGCGATTTAAGCCATGAAAACAACTTATTTCGCTCAGAGAAGATGAGTTACAGCGTGGGTCCCAGTCAGTTGAGTTTAGGGCTTGAAATGGAGGAGCTGGGTTCTCCAACTGTTCGAACACCCAAAAACAACTACTCTCGCCGTTTTACGCAGCAACCTTTTATCGACGGCCGGGAATTCAAAAGAAGCGGCAAGATAATCAGTGGTGGAAAAAGAAGCATCAGAGCTCCGAGAATGCGATGGACCACGACTCTCCACGCTCATTTCGTACACGCGGTTCAGCTACTCGGCGGCCATGAAAGGGCGACACCAAAATCAGTGTTAGAGTTGATGAACGTGAAAGATCTAACCCTAGCTCACGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGGGCACTGACAAGAACCCAGGTAATGCAAGTTTATGCCCATGGAAGGCCATTTGTTTGGATCTCAGAGGCCTGAGTCAAGAGCTGAGAGATTCGGGGTTGAACAAAAGGGCAAGGCTAGATGGTGCCAATGGGGGGATGCTTTGCCGGAAGACTAACACCCGAAGCAAGTTTGTGATCGTGTTGTGCGCTCAAGATGCAGGCGGCGGAGTGCAGCAGCTCATTGTGGTGTCCAGGCGAGATTCCCCTCAACTTAGAATTTACTCTGGGAACACCAAGCCTCCAAATGGATGA | 831 | 48.5 | MMGASSSSPDLSLNISPPFFPETEDNQVSRKPVNCDRSSPTYSGSSTGSDLSHENNLFRSEKMSYSVGPSQLSLGLEMEELGSPTVRTPKNNYSRRFTQQPFIDGREFKRSGKIISGGKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKGTDKNPGNASLCPWKAICLDLRGLSQELRDSGLNKRARLDGANGGMLCRKTNTRSKFVIVLCAQDAGGGVQQLIVVSRRDSPQLRIYSGNTKPPNG | 276 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 24386123 | 24387975 | - | BLOR09316 | Blo18g00828 | 74132 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo18g00828 | 276 | Pfam | Myb-like DNA-binding domain | 126 | 177 | IPR001005 | - | |
Blo18g00828 | 276 | MobiDBLite | consensus disorder prediction | 32 | 53 | - | - | |
Blo18g00828 | 276 | Gene3D | - | 124 | 180 | - | - | |
Blo18g00828 | 276 | SUPERFAMILY | Homeodomain-like | 122 | 178 | IPR009057 | - | |
Blo18g00828 | 276 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 6 | 187 | IPR044847 | GO:0000976|GO:0006355|GO:0010158 | |
Blo18g00828 | 276 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Blo18g00828 | 276 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Blo18g00828 | 276 | PANTHER | TRANSCRIPTION FACTOR KAN4-RELATED | 6 | 187 | - | - | |
Blo18g00828 | 276 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 125 | 178 | IPR006447 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo12g00936 | Blo18g00828 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo12g00936 | Blo-Chr12:27534951 | Blo18g00828 | Blo-Chr18:24386123 | 5.19E-62 | dispersed | |
Blo18g00828 | Blo-Chr18:24386123 | Blo19g00245 | Blo-Chr19:12987645 | 9.28E-36 | dispersed | |
Blo18g00828 | Blo-Chr18:24386123 | Blo17g00475 | Blo-Chr17:6723205 | 1.42E-35 | transposed | |
Blo18g00828 | Blo-Chr18:24386123 | Blo18g00480 | Blo-Chr18:5818249 | 1.20E-34 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13616 | PF00249 | Myb_DNA-binding | 1.10E-05 | CL0123 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo18g00828 | - | - | pvy:116137755 | 223.787 |