Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00034 ATGAATTACTTCACAGGCTCTATTCCTCTTTCCTTGTCCAATATTTCAAGTCTGAAGACTGTTACGTTAGGTTCTAACAATTTCTCTGGCAAGTTGAGAGTTGATTTTGGCGGCATGAAAAATTTATCAGCACTTGTGTTAGATGACAATAATCTTGGAAGTGGGGATATGGATGAGTTGAGTTTTCTTAGCTCGATGGCAAATTGTAGCAAGCTCTCTGAACTGAGTTTCTCCCATAACTCCTTTGAAGGAGCTCTACCCAGTTCCCTCGCAAACTTATCAACTCAACTTCAACGATTACTCTTAGGAAGAAATCGATTGTACGGGGAAATACCATCGGGAATAGGCAATCTCGTGGAATTGAATACACTGGGGTTTGAAGGAAATAATTTTAGTGGAAACTTGCCCGCTGACATTGGCAAGCTTTTAAACTTGGGATGGTTAACTCTGGGGGGAAATGCACTTTCAGGTCAAATTCCTGCAGCCATAGGAAACTTAACACGGTTGATTACACTTGGCTTGGAGAAAAATAGATTCCATGGTGCAATTCCGGAAAGCATTAGAAATTGTCAAGAGTTGTCGTTCTTTTCTGTTGTCGGTAACTTGTTGAATGGTAGCATTCCTAAACAGATTTTCTCTCTCTCCAAATTAGGAGTAGGATTGGATTTATCTCAAAACAAGTTCAGTGGAGATTTACCCATTGAAGTTGGATGCTTGTTGACTGCTTTGGTTTTATCTGGTAATGAGTTATTTGGAAATATTCCAAGTGAGCTGGGCAATTGTGAAAGTTTGGAATATCTCGACTTAGAGGGGAATTACTTCGATGGGTCCATTCCTTCAAGCTTTAGTTCACTGAGAGACCTTCGATTTCTCGACCTTGCTGGCAACAATTTGTCAGGCCAAATTCCAGATTTTTTGTCAACTTTTTATATGAGTTACTTAAATCTATCCTTCAACAATTTTGAGGGCGAGGTTCCATCGAATGGAGTTTTTTCAAATGCATCTGCAATCTCGTTGCTTGGAAATGACAAACTTTGTGGTGGAATCATAGCTCTATGCCTGCCTAATTGCACTCACAGTGCGAGTAAGAGGCCAAAATCTACTAAACTTCTAAAGATTATCATTTCAATATGCATGTCTCTTTTGGGGCTGGCTATCATATTTTTTTTCTTATTCTGTCTCGTTCTCAAGAAAAAGAAAAGGAAAGTAGAAACGTCGAGTTTGCTTATGAAAGACTCACTATTCTTGGAAATTTCTTATGACGATCTCCGTAAAGCAACTGATGACTTTTCTTCAAATAATTTGATTGGAAATGGATACTTCAGCTCTGTGTATAAAGGTTACCTTGAAAAAGTAGGAGAAACAGTAGCCATTAAAGTACTCAATCTTCAAAACCATGGAGCAACGAGAAGTTTTACGTCCGAATGTGAAGCATTGAGAAATATTCGTCATAGAAATCTGCTGAAAACGATAACCTCATGCTCCAGCATTGATTTCCATGGAAATGATTTCAAAGCTATTGTTTACGAGTTCATGATTAATGGAAGTTTAGATTCATGGCTGCATGTTGGCAGTGACGGTCGAGGAGAAAGATTGAAACTTCTTCAACGCCTAAATATTGCAATCGAAGTGGCTTCAGGACTCGATTATCTTCATCACCATTGTCATATCCCAATCGTGCATTGTGATCTGAAGCCGAGTAACATTCTTCTGGACGAGGAAATGACTGCCAATATTGGAGATTTTGGACTTGCTAAGCTTCTTCCTAAAATCACCAACTATACTAACAGTAGCTCCATGGGAATACGAGGAACAATAGGTTATTCTGCTCCAGGTACTATGAACAACCAGACTAGAATTTTTTAA 1866 38.85 MNYFTGSIPLSLSNISSLKTVTLGSNNFSGKLRVDFGGMKNLSALVLDDNNLGSGDMDELSFLSSMANCSKLSELSFSHNSFEGALPSSLANLSTQLQRLLLGRNRLYGEIPSGIGNLVELNTLGFEGNNFSGNLPADIGKLLNLGWLTLGGNALSGQIPAAIGNLTRLITLGLEKNRFHGAIPESIRNCQELSFFSVVGNLLNGSIPKQIFSLSKLGVGLDLSQNKFSGDLPIEVGCLLTALVLSGNELFGNIPSELGNCESLEYLDLEGNYFDGSIPSSFSSLRDLRFLDLAGNNLSGQIPDFLSTFYMSYLNLSFNNFEGEVPSNGVFSNASAISLLGNDKLCGGIIALCLPNCTHSASKRPKSTKLLKIIISICMSLLGLAIIFFFLFCLVLKKKKRKVETSSLLMKDSLFLEISYDDLRKATDDFSSNNLIGNGYFSSVYKGYLEKVGETVAIKVLNLQNHGATRSFTSECEALRNIRHRNLLKTITSCSSIDFHGNDFKAIVYEFMINGSLDSWLHVGSDGRGERLKLLQRLNIAIEVASGLDYLHHHCHIPIVHCDLKPSNILLDEEMTANIGDFGLAKLLPKITNYTNSSSMGIRGTIGYSAPGTMNNQTRIF 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 869463 871328 + BLOR09377 Blo19g00034 74175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00034 621 PANTHER PUTATIVE-RELATED 2 610 - -
Blo19g00034 621 Gene3D Phosphorylase Kinase; domain 1 392 511 - -
Blo19g00034 621 ProSiteProfiles Protein kinase domain profile. 430 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo19g00034 621 SUPERFAMILY L domain-like 95 347 - -
Blo19g00034 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Blo19g00034 621 Pfam Protein kinase domain 432 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo19g00034 621 SMART serkin_6 430 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo19g00034 621 Gene3D Transferase(Phosphotransferase) domain 1 512 619 - -
Blo19g00034 621 Pfam Leucine rich repeat 240 298 IPR001611 GO:0005515
Blo19g00034 621 SUPERFAMILY Protein kinase-like (PK-like) 404 617 IPR011009 -
Blo19g00034 621 Gene3D Ribonuclease Inhibitor 1 359 IPR032675 -
Blo19g00034 621 PANTHER OS04G0122200 PROTEIN 2 610 - -
Blo19g00034 621 ProSitePatterns Protein kinases ATP-binding region signature. 436 459 IPR017441 GO:0005524
Blo19g00034 621 SUPERFAMILY L domain-like 2 138 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo19g00034 Blo-Chr19:869463 Blo07g00675 Blo-Chr7:22050598 7.27E-16 dispersed
Blo19g00034 Blo-Chr19:869463 Blo19g00036 Blo-Chr19:904878 1.24E-12 proximal
Blo19g00034 Blo-Chr19:869463 Blo19g00035 Blo-Chr19:883667 8.34E-18 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84836 PF00069 Pkinase 1.30E-31 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00034 - - pvy:116111738 634.024