Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00094 ATGGAGACCGAGGAGTACAGAGAGGAAAACTTGGTTGTCAGGGAGTTTCACGCAAATGGAGTTTCCATTAAAACAACAGAAGTTGAGGCAAAGCTAGATGAGGGTAATATTCAAGAGGCCGAATCTTCGTTGCGGGAAGGATTATCATTGAATTTTGAGGCGACAAGAGCTCTTCTTGGAAAGTTGGAGTATCAAAGAGGCAATGTGGAAGGCGCTCTTCGAGTGTTCGATGGCATTGATCTTCAAGCAGCAATTCAGAGATTGCAACCTTCTCTTACTGAAAAAATGCCATCCAAAAAGGGTCGTCCTCGCACAGATTCGCAGCATGGAGTCTCTCAGCACGCGGCTAACCTGGTACTTGAAGCCATATATTTAAAGGCAAAGTCTCTTCAAAAGCTTGGGAAATTAACTGAGGCTGCTCATGAGTGTAAAAATGTGCTTGATGCTGTGGAGAAGATATTCTATATGGGCATTCCAGATGTGCAAGTTGACAATAGATTGCAAGAGACAGTAAGTCAAGCTGTTGAGCTTCTTCCAGAGCTTTGGAAACGGGGGGGTTGCTACCAGGAAGCAGTTTCTGCCTATCGACGAGCACTCTTGAGCCAATGGAACCTCGATAATGAATGCTCTGCAAGGATTCAGAAAGGATTTGCTGTCTTTCTTCTTTATGGAGGGGTAGAGGCTAGCCCTCCTAGTTTAGCAGTTCAGGTTGAGGGCTCATATATACCCAAAAACAATATGGAAGAGGCAATTCTACTTCTGATGATTCTAATGAGGAAATTTTTCCTTGGTAAGATCAACTGGGATCCATCTGTAATGGAGCATCTAACATTAGCACTATCTTTATGCAGTCAAACTTCTGTTTTAGCCAAACAATTTGAAGAAATCATGCCTGGAATATATCCCCGTGTGGATATTTGGAAGTCTTTAGCTCTTTGTTACAGTGGAGCAGGACAAAATAAATCTTCCTTAAACCTGCTGAAAAAGTCCTTACACAAACATGAAAAACCAGATGATTTGCTGGCATTGTTAGTGGCTGCAAAGATCTGCAGTGAAGATTCTTACCTTGCAGCTGAAGGGGTTGGCTATGCCCGAAGGGCAATCAGTAATGCATTAGGGAAAGAAGAGCATTTGAAGAGTGTGGGCCTTCGAATGTTGGGTCTTTGTCTGGGAAAGCAAGCTAAGCTATCCTCCTCCGATTTTGAGAGGTCCCGCCTTCAGTCGGAGGCTTTGAAATCTCTAGACCAGGCAGCTTCTCTGGAGCGAAATAATTCTGATTTAAGTTTTGAATTGGGAGTTCAATTTGCAGAACACAGGAATTTGACTGCGGCTTTGCATTATGCGAAGAAATATATTGATAAAACCGGTGGTTCTGTCTTAAAAGGCTGGAAATTGCTTGCTCTTGTGCTGTCTTCTCAAAAAAAATTTGCAGAGGCTGAAGTGGTCACTGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAAGGACCACTTTTCATGCTTAGAGCCAAGCTGAAGATATCTCAGTCACTGCACATGGACGCCATTGAAACTTATCGTTACCTCCTCGCATTAGTTCAAGCTCAAAGAAAATCGTTTGCACCTCTTAAACTTTGGAATCGGGTTGAAGGTGATAAGGTCAATGAATTTGAAGTATGGCAAGGCTTGGCCAACTTATACGCCAGTCTTTCACATGGCAAAGATGCAGAGATATGTTTGGGAAAAGCCAGAGAGCTGAAACAGTACTCAGCCGAAACGCTTCATACCGAAGGCAAGAACTCAAAATCTTTATTCTACTTCATTGCCATCTGTGTGATATGTGAAGGAAGTGGACAAATCCCAGAAGCTCTTTCCGCTTATATTAATGCTCTTCTATGTGAGCCTGATTATGTTCCTTGCAAGATATTGATTGGTGCCCTTTTGACCAAAACCGGTTCGAAGTCGTTGCCAATTGCAAAATGCTTACTTTCCGACGCATTGAGGATCGATCCGACCAACAAGAAGGCTTGGTATTATTTGGGAATGATTCATAGGGACGACGGGCGAACAGCCGATGCTATCGATTGTTTTCAGGCAGCTTCGATGCTTGAAGAATCCGACCCAATCGAAAGCTTTGCCTCTATTCTCTGA 2130 43.29 METEEYREENLVVREFHANGVSIKTTEVEAKLDEGNIQEAESSLREGLSLNFEATRALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSLTEKMPSKKGRPRTDSQHGVSQHAANLVLEAIYLKAKSLQKLGKLTEAAHECKNVLDAVEKIFYMGIPDVQVDNRLQETVSQAVELLPELWKRGGCYQEAVSAYRRALLSQWNLDNECSARIQKGFAVFLLYGGVEASPPSLAVQVEGSYIPKNNMEEAILLLMILMRKFFLGKINWDPSVMEHLTLALSLCSQTSVLAKQFEEIMPGIYPRVDIWKSLALCYSGAGQNKSSLNLLKKSLHKHEKPDDLLALLVAAKICSEDSYLAAEGVGYARRAISNALGKEEHLKSVGLRMLGLCLGKQAKLSSSDFERSRLQSEALKSLDQAASLERNNSDLSFELGVQFAEHRNLTAALHYAKKYIDKTGGSVLKGWKLLALVLSSQKKFAEAEVVTDAALDETAKWEQGPLFMLRAKLKISQSLHMDAIETYRYLLALVQAQRKSFAPLKLWNRVEGDKVNEFEVWQGLANLYASLSHGKDAEICLGKARELKQYSAETLHTEGKNSKSLFYFIAICVICEGSGQIPEALSAYINALLCEPDYVPCKILIGALLTKTGSKSLPIAKCLLSDALRIDPTNKKAWYYLGMIHRDDGRTADAIDCFQAASMLEESDPIESFASIL 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2436350 2440202 + BLOR09437 Blo19g00094 74235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00094 709 Gene3D Tetratricopeptide repeat domain 18 203 IPR011990 GO:0005515
Blo19g00094 709 PANTHER CALMODULIN-BINDING PROTEIN 4 708 - -
Blo19g00094 709 ProSiteProfiles TPR repeat profile. 667 700 IPR019734 GO:0005515
Blo19g00094 709 SUPERFAMILY TPR-like 58 453 IPR011990 GO:0005515
Blo19g00094 709 SMART tpr_5 120 153 IPR019734 GO:0005515
Blo19g00094 709 SMART tpr_5 304 337 IPR019734 GO:0005515
Blo19g00094 709 SMART tpr_5 597 630 IPR019734 GO:0005515
Blo19g00094 709 SMART tpr_5 460 493 IPR019734 GO:0005515
Blo19g00094 709 SMART tpr_5 667 700 IPR019734 GO:0005515
Blo19g00094 709 SMART tpr_5 550 583 IPR019734 GO:0005515
Blo19g00094 709 Coils Coil 403 423 - -
Blo19g00094 709 MobiDBLite consensus disorder prediction 90 111 - -
Blo19g00094 709 Gene3D Tetratricopeptide repeat domain 240 648 IPR011990 GO:0005515
Blo19g00094 709 SUPERFAMILY TPR-like 408 697 IPR011990 GO:0005515
Blo19g00094 709 PANTHER PROTEIN NPG1 4 708 IPR043376 -
Blo19g00094 709 Gene3D Tetratricopeptide repeat domain 651 704 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01493 Blo-Chr1:54434194 Blo19g00094 Blo-Chr19:2436350 1.18E-175 dispersed
Blo03g00759 Blo-Chr3:32007024 Blo19g00094 Blo-Chr19:2436350 2.40E-61 dispersed
Blo07g00276 Blo-Chr7:3252829 Blo19g00094 Blo-Chr19:2436350 0 dispersed
Blo10g00627 Blo-Chr10:19434670 Blo19g00094 Blo-Chr19:2436350 3.36E-134 dispersed
Blo10g00628 Blo-Chr10:19453587 Blo19g00094 Blo-Chr19:2436350 1.72E-11 dispersed
Blo19g00094 Blo-Chr19:2436350 Blo03g00758 Blo-Chr3:31999471 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00094 K21843 - csv:101206641 1075.46