Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00111 ATGCCGGAATCTGAGGGTGGTGGTACGCCGACGGCGTCAGCGCCGGCGACTCCGATATCGCCGGGAGGTCCGCTGTTTCCCTCTTTCCGGGTGGATTCGATGTCGTATGATCGGAAGCCAATGCCGGGGTGCAAGTGCTTCCCTGTAAACGCTCCCACATGGGGGCAACCTCACACGTGCTTCACCGACTTCCCTGCGCCTGACGTCTCACTCACTAGAAAGATAGGTGCTGAGTTTGTGGGGACCTTCATCCTCATATTCGGAGCGACAGCTGCGCCTATCGTCAACCAAAAGTACCATGGCGCTGAGACTCTGATAGGCAACGCAGCCTCCGCAGGTCTGGCAGTGATGATAGTGATCCTCTCCACTGGCCACATCTCCGGTGCCCACCTCAACCCGTCTCTCACCATCGCCTTTGCGGCTCTACGCCACTTCCCTTGGGTGCAAGTTCCCGCTTACATTGCCGCCCAGGTTTCAGGCTCCATTTGTGCTTCCTTCGCTCTTAAAGGTGTCTTCCACCCTTTTATGTCCGGCGGAGTCACCACTCCGTCCGTGAGCACCGGCCAGGCGTTTGCTATTGAACTCATCATCACTTTCAATCTCTTGTTTGTTGTTACTGCTGTGGCTACTGACACTCGAGCTGTGGGAGAGTTGGCAGGCATTGCAGTTGGTGCTACTGTTATGCTCAATATTCTAGTGGCCGGGCCGTCAACTGGCGGTTCGATGAATCCGGTGCGGACACTGGGACCGGCTATTGCAGCTGGAACCTATCGAGATTTGTGGTTGTACCTGGTGGCACCGACCATCGGGGCCCTGGCTGGGGCTGGAATCTACACTCTGGTTAAGCTCAAGGAAGATGGGACTGAGCCTCCTCGCCCTAGGAGCTTCCGCCGCTAG 897 57.08 MPESEGGGTPTASAPATPISPGGPLFPSFRVDSMSYDRKPMPGCKCFPVNAPTWGQPHTCFTDFPAPDVSLTRKIGAEFVGTFILIFGATAAPIVNQKYHGAETLIGNAASAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSGSICASFALKGVFHPFMSGGVTTPSVSTGQAFAIELIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGTYRDLWLYLVAPTIGALAGAGIYTLVKLKEDGTEPPRPRSFRR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3011372 3015348 - BLOR09454 Blo19g00111 74252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00111 298 MobiDBLite consensus disorder prediction 1 24 - -
Blo19g00111 298 PANTHER AQUAPORIN NIP2-1 10 292 IPR034294 -
Blo19g00111 298 SUPERFAMILY Aquaporin-like 70 285 IPR023271 -
Blo19g00111 298 ProSitePatterns MIP family signature. 130 138 IPR022357 -
Blo19g00111 298 CDD MIP 73 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo19g00111 298 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 10 292 - -
Blo19g00111 298 Gene3D Glycerol uptake facilitator protein. 65 291 IPR023271 -
Blo19g00111 298 Pfam Major intrinsic protein 69 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo19g00111 298 PRINTS Major intrinsic protein family signature 112 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo19g00111 298 PRINTS Major intrinsic protein family signature 193 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo19g00111 298 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo19g00111 298 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo19g00111 298 PRINTS Major intrinsic protein family signature 149 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo19g00111 298 PRINTS Major intrinsic protein family signature 261 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00779 Blo19g00111 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00666 Blo-Chr7:21826572 Blo19g00111 Blo-Chr19:3011372 4.23E-111 dispersed
Blo14g00869 Blo-Chr14:31996620 Blo19g00111 Blo-Chr19:3011372 4.27E-66 dispersed
Blo19g00111 Blo-Chr19:3011372 Blo17g00072 Blo-Chr17:548820 5.53E-26 dispersed
Blo19g00111 Blo-Chr19:3011372 Blo03g00779 Blo-Chr3:32479753 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00111 K09874 - rcu:8278501 501.516